Array 1 5679181-5681350 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWQA01000001.1 Mycobacterium persicum strain 12MK PseudoContig_CP009483.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ========================================= ================== 5679181 38 100.0 34 ...................................... ACGAGTTCAAGCTCATCATCGGCACCAGCGCAGA 5679253 38 97.4 34 C..................................... CAATTCGCCGGGGCCGGTATCGTTTGAGATGAAT 5679325 38 100.0 35 ...................................... AAATCTCATCCGTGGCCGGCCGTGGTGCGCCAAGC 5679398 38 100.0 36 ...................................... TACGACCACCCGTCCGAACGCGCCATCCAGATCGGT 5679472 38 100.0 36 ...................................... ATCCGAGACGCCGCTATAGCAAGCACCTTTGCGCCG 5679546 38 100.0 35 ...................................... AGATAATCGGCTAGAGAATCTTGAACTGTGGTCAA 5679619 38 97.4 35 A..................................... CGAAGTACAAGCTTTCGCGTGGGACAAGCAGACCA 5679692 38 97.4 36 A..................................... ATCACTGATCAGCCGCTGATTGTGTGGTCCGCGCAT 5679766 38 100.0 35 ...................................... ATTTGAGAAAGGAAACTCCCATGGCCATTATTGGG 5679839 38 97.4 41 T..................................... CTTGGCGCACCGACCGAAGCCACCCCCGGCCAAACCGCGGC 5679918 38 100.0 36 ...................................... GGGTGAGCCGACGCCCATTTTGGTTCCGTCTTTGCA 5679992 38 97.4 35 C..................................... CCGGGTGTGGGAGCGCAGGGAAAGCGAGGGAAGAT 5680065 38 100.0 36 ...................................... CTAGGTGTGGTGCGTGCAAGACGTCGTGGGGTCCAG 5680139 38 97.4 37 A..................................... CAGATACCCAACTATCCGGTCCACCATCTGCCGGCGC 5680214 38 100.0 37 ...................................... GCTCCGGTGGACAGACGTCAGAGATGGGGCCGCGCCC 5680289 38 100.0 34 ...................................... CAGCCCGGAGCTATAAGGCTTATACGATAACGTC 5680361 38 100.0 35 ...................................... AGCGGTGAGACACGCGACGGCTGGAATGTAGCCGA 5680434 38 100.0 35 ...................................... TTTGGCCCTGCACATCACCCGGACCATGGACCAGG 5680507 38 97.4 37 A..................................... AGGTTGAGCCATGTAGCAGTCCCGCTCCACCACCGCC 5680582 38 100.0 35 ...................................... CAGTCGTCGGCGCGCGGTCGAGATCCGGGCGCGTA 5680655 38 100.0 33 ...................................... GGCTAACCCCCCGCGGGTGAGCCCGCCGAGTGG 5680726 38 100.0 35 ...................................... CGTCGTAACTCCTCCGCCGCGGGATCCGCCGTGGA 5680799 38 97.4 36 C..................................... TCATTAATCTCCAACGACACCGGGCCTGCCGAATTA 5680873 38 100.0 36 ...................................... AACGGAATAACGTCACGAATCACATCGTCGATCTGC 5680947 38 100.0 33 ...................................... ACCGACGCGAGTAGCCGACCCGTCGAGTTGCCT 5681018 38 100.0 37 ...................................... TGCCGGTGCTTGCCGACCCACGCAAGATCCTCGTCGC 5681093 38 100.0 35 ...................................... CTTTCAGGCGGCGATGCGGAGTAGGTCGATGATGG 5681166 38 97.4 35 A..................................... TTTTGACCCGAGTGTCCAGCGATACCGCACACGGC 5681239 38 100.0 36 ...................................... ATCCGCGAAGCCGACCTGGCCGCCACACCGACCCAC 5681313 38 86.8 0 C.....A..........T......T............T | ========== ====== ====== ====== ====================================== ========================================= ================== 30 38 98.8 36 GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Left flank : TGCGACCCGTAGTAGATCCGCCCGAGGATTCGGGCTCCCAAAGCGCAGAACGGTTTGTTGATAAGTTGATGATTGTCGCGGTCGCCGAAAAATAGCTGTTCGCGAAGGGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAACGACGAGGACGCCACCGATCAGCTGTACGCCGACCAGGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAACTTCCCCGACAAAGGCGGCACCACCCAGCCAGCCAAAAAGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAACACGCTGCTGCGTAACGATGCGCCGTTGGTGGCCTGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAACCGAACAGTGTCCCCCGGCTGGGCCACCATTTCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC # Right flank : TCGACCCCACGGCTCACACCATCGACAAGGTTGTCAAGCGTTGGATGACTTTCTGCGGCGCCGATGATTCGAAAGATCAGGCTCGACAAATGACCCTAGTGGTGTGTCACGCAAATAGTTAACTGCATGTTCGGTATTCTGGATCGGTGAGCGCATCACCTGCAGTTGCTTTGGCCATGTCGGTTGGCGAGCGTGAAACGTTGGAGAGGTTGGCGCGGTCTGATTCGGTGCCGCATCGGCAGGTGATGCGCGCGCGTGCGTTGCTGATGGCTGCTGACGGCGTGGCGAACACCCGCATCGCTGAGGAGGTGGGGGTGACACCGGTGACGGTGCGTAGCTGGCGCAAAAGGTTCAGCGAGGACGGGCTGGCCAAGCTGGGACAGGTACGTAGAGGACGCGGCCGCAAAGCCACGATCTCAGACGCGCAGGTCGCTGAGATCGCGCGATTGACCACCGAGGAGACCCCGCCCGGCCACACGCATTGGTCATGCCGCACGATG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //