Array 1 11911-11545 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AEHO01000006.1 Lactobacillus iners LactinV 09V1-c contig00028, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     11910	    36	 100.0	    30	....................................	AAAAAGTTGATACCGAAGTTAAGACTAGGA	
     11844	    36	 100.0	    30	....................................	CAAGAGATGTTTTGGGTATTGATATTGGTC	
     11778	    36	 100.0	    30	....................................	TCTTTTATGTGATGCGTCTGCCATGATGAC	
     11712	    36	 100.0	    30	....................................	TGTGTTTTCTTTTTCTTCTGGTTCAGGTGT	
     11646	    36	 100.0	    30	....................................	TAGCATTAAGATATTTAATTACTCTGTCAT	
     11580	    36	  97.2	     0	..........................C.........	|                             	
==========	======	======	======	====================================	==============================	==================
         6	    36	  99.5	    30	GTTTGAGAGTTATGTAATTTATGCACTAGGTAAAAC	                              	       

# Left flank :   CGAGCTAATCCTAACAATACTAAGATATTAACTAAATTATATTCGAATCTGATTAGTGGCTTATCAAGTGACGAACGATATCAAGATAGTATTAATTTTGAAAGTCAATTATATTCTTTTATGGATAAGATAGCTTTTGATTGTGATTATCATTTGACTTATGGGGATATTGATTATAAAAGTATTTTTAAAGCCCTAAATTTATCAATAGATACTGATATTAAAGGGCTTATGTCGAATTTCGTGTCGTATCTTGATTTGTCATACAAACTTTTGGGTAAGAAAATTTATTTTGCTGTTAATTTAAATACATTCTTTTCACAAAAAGATATGGGTGTTCTTAATGATTATTTGCGTTATAATAATATCGTATTGGTTTGCCTAGATAATAGCTTAAAACGGACTCTTTTTGAGGATGAAAATATCAGAATAATTGATCAAGATTTAAGTGAAATTTAAAGCTACGCATAACCTGAAATCTTGAAAGTCGTTAATTTGAG
# Right flank :  TAAAAATATTTTTTCATTTATATACATTGAATTTAAATAGTTTAATATATATTACTGTGTATAAGTAAAACGATAAATAGATATTGATCGTAAATATCATTGTTTATTTTATAAAATATGATTATTACAAATTAATAGCTTTAAAAAAAGAGACATTTGTCTCTTTTTTAATGAACTTGATCTCATTTGTTCAGCCTTGATGAGGTTGATTAATTTTACATCTCTAAACTTTTTATAAAAGAGATAATTTTTCTATATTACACGTAATAAAAACCTTTCTGGATTGCGATGCAACCACGGAAAGGTTTTTTTAGTGTTTTAATTAAAATAAAATTTCTTTCTTCTTTGGAATTGTTTTAGCAATGACTCTACCTTTATGAATAGAATATAAAACTTCACTATGTTCATTTAAAACTTGGTAGAAATTCTTACCATTTAATACAATCAAGTTAGCCGGTTTACCAACTTCGATGCCATAACGATCGCTAATATTTAAGACA

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTGAGAGTTATGTAATTTATGCACTAGGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTGAGAGTTATGTAATTTATGCACTAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [88.3-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.91   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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