Array 1 1067-3654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCPF010000077.1 Klebsiella pneumoniae strain KCJ3K436 NODE_77_length_14690_cov_6.931333, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1067 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 1128 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 1189 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 1250 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 1311 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 1372 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 1433 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 1494 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 1555 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 1616 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 1677 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 1738 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 1799 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 1860 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 1921 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 1982 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 2043 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 2104 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 2165 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 2226 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 2287 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 2348 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 2409 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 2470 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 2531 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 2592 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 2653 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 2714 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 2775 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 2836 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 2897 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2958 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 3019 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 3080 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 3141 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 3202 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 3263 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 3324 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3385 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 3446 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3507 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3568 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 3626 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //