Array 1 42759-44251 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNRQ010000008.1 Schaalia sp. lx-260 Scaffold8_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 42759 29 96.6 32 ............................T GTGCCGTGGTTGGTTGGGTATCTGGACGGGGC 42820 29 100.0 32 ............................. GGGGTTGAGGTTTTGTTGAAAGGTTTGAATAT 42881 29 96.6 32 ............................T GTCTGGGAGTTCTTCGTCTTCTTCAAGTTGTG 42942 29 96.6 32 ............................T AAGAAACGGGGTATTTCTGTTGATTTTCTCGC 43003 29 96.6 32 ............................C GCAGCAACACCATCAGTCCAACAAAACTGATC 43064 29 96.6 32 ............................T AGGTCGTGACAACCCACCGGCCAGTATGAAAC 43125 29 100.0 32 ............................. GCTGACGTAAATCAGGTAACACTTAATCGACA 43186 29 100.0 32 ............................. ATAGCCTACGCCCTAATGGAATGTGAACTTGC 43247 29 93.1 32 .................A..........T AGTCGACGGATCATCAAACTCATCAGCGAACG 43308 29 96.6 32 ............................C ATACTCGTCATACCGAACATACGAACCATGAT 43369 29 100.0 32 ............................. AGCATGGGCACATACCGCGAATACCTCTCAAC 43430 29 96.6 32 ............................T AGATACGAGAAATCTGCCCCTGCGACACGCCG 43491 29 96.6 32 ............................C AAATTCTGTCTCTTTCACCCGGCGAAAAAGGC 43552 29 100.0 32 ............................. GCATCGGAAACGGTTTGAAAAAGTCCTTGAAA 43613 29 96.6 32 ............................T GGTGCAACACAATCCGCGCAACACCATAAGGC 43674 29 100.0 32 ............................. TTTAAGCAGGGAATATAAGTATGGTTGATGGT 43735 29 100.0 32 ............................. TGAGTGCCATTTCAAAGGTAGTGGGTCTTTTG 43796 29 96.6 32 ............................T ATGTGCATGGCTAAGGCGAAGAAGTTGCGACC 43857 29 100.0 32 ............................. TCTTGTCATACTGCATCGCTGTTTGGCATAGT 43918 29 96.6 32 ............................C AAAAACTACTATGTGCGAGTGCGGGCCATCGA 43979 29 96.6 32 ............................C TGATAACACAGTATGGTGTAAGGCACAAACAG 44040 29 100.0 32 ............................. CACAACACCCAGAACTAGGCCCCGTGCAAATC 44101 29 100.0 32 ............................. CCTATGGGTCGATTGGCTACTCAAAAACCAGT 44162 29 100.0 32 ............................. CATCAAAGTTTTTGTTTCGCGCGCGCGTAGGT 44223 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.1 32 GTGTTCCCCGCGTAAGCGGGGATGAGCCG # Left flank : ATTATGCGGAAGAAGTAGTGCTCACATGATTACTTTAGTGGTGACAGCGTGTCCAGCTGGATTGCGTGGAGATTTAACGAAATGGCTTCTAGAAATTAGTCCAGGAGTATTTGTAGGAAATGTAAGCGCACGTGTACGTGATTCCTTATGGGAAAGAACCGTAGGACTTTGTAAAGACGGTAGGGCGTTAATGATATTCAATGCGCCGAATGAGCAAGGCTATGACTACCGTGTGCACCTGCATTCATGGGAACCGGTTGATATGGATGGATTGACTTTGATGAAGCGTCCAAATGCGCGTGAAGATTATCAGCGTGCACGTACTGGTTGGAGCAAAGCTAGGGTATATAGGCGAGCTATACGCCGTTGAAATACCGGTGAATCTAAAAATTTAGAATAAGGTGCGAAAGTAACTTTGTAATTAGCGCAGAGAAATGAAAGTCGCACGAAAATAGTATTTTTTGTTGAATAAAAGATGATAAAATAAGGACTTCTTAAGA # Right flank : GTGCGGCAAGAGCGAGTATCCCAAGCGCTACCAGTGCGTACATGTTATAACCAGTCCATACGAGAGCGGCTATGAGGATATAGGCGAACAGGTTAATTTCGTTGCGATTTTTCATATTGTGTGATGGAATACCGGTAGGGCCGGTGGCCCGGAGTTGGTTTGTTCATCTCCGGACCGCCAGCTTTTTACTTGCGATCTTTCGGCTTTTTAATCTCGCCTACCAGCTCAGCTATTGCTTGAACAAGTTTGGCAAGCGTCGCAATGATCGCTGCTATTCCGTGTTCCCCGCGTAAGTGAGGATGAGCCTCTCTGTGTGAGCAGAACACGCCGCGCCAGCAAACCCCGCACACAGGCCCTACCAGTGAGGACACCAGCAGTAAGACAATCCGCACTCCTGCTACGCCGCAAAGCGCGGATAAGCTAGACAGGATCAAAAGCCTGTACGCTACCTTGGAGCCAATAGCCCTCACGCCAGGCGCGGGCGAGGATGCGCCGAACAT # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.73, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTAAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //