Array 1 50411-44842 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVKO010000025.1 Acinetobacter baumannii strain ACIN00265 ACIN00265_c0025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 50410 29 100.0 31 ............................. GAAGCTGTATGTTGATGGATTAATTCATTTG 50350 29 96.6 31 ............................T TGTGACCGAGTTCGATCGGTCACAATTCCCC 50290 29 96.6 31 ............................T ACGGGTTGCGGTTCGGGCTATGTTCCCGGGT 50230 29 96.6 31 ............................G ACTGAATTTGTGCATCTTCTTCGCGTTTTAC 50170 29 96.6 31 ............................T TTAGATGGTGAGGTTCGAGTTAAAACAGGTG 50110 29 100.0 31 ............................. AAAACAACGGGTTCACCAGAAGCCCGAGAAA 50050 29 96.6 31 ............................T GCTCTGGCGTTCGCATAATGCCGACTATGTA 49990 29 100.0 31 ............................. AACACATTATGACCTTGGCGGAGCTTTGCAG 49930 29 100.0 31 ............................. ACTGGTTGCGGTACAGGTTATGTTCCGGGTA 49870 29 96.6 31 ............................T GTTGATTGTAATGATCTTATGAACTCACATT 49810 29 96.6 31 ............................T ATTAAATCAGGCTGTCAAAATGGCGCGACTT 49750 29 100.0 31 ............................. CTATGACAATTATCCAATTCATCAAAGATTC 49690 29 100.0 31 ............................. CCCCCAACAGGCTTGTTGTTAATCGCATTTA 49630 29 96.6 31 ............................T GTACCACATCCTGTAGGTGGCATATCACAAT 49570 29 96.6 31 ............................T TGATTACAAAAACCGGCTCTTCGATGTGACG 49510 29 96.6 31 ............................T TATGTTGAGCTTAAAGCTTCACCAGCAAAGA 49450 29 96.6 31 ............................T TTTGGAATAGATTGTAAAAGTGCAGAGAAAA 49390 29 96.6 31 ............................C ATACCGTATAAATCCATTTTAGCAATAGCTG 49330 29 96.6 31 ............................T TGCAAAATCTTCGCAGGACTAGCTTTTAGTT 49270 29 100.0 31 ............................. CGGTAAACAGATGGAAAAATTGTGCGTTTGT 49210 29 96.6 31 ............................T ACCACGAAGAAATACCAAACTGCATAGATGA 49150 29 100.0 31 ............................. ATTATCATCAGGATCACCTTCGGCACGACCT 49090 29 100.0 31 ............................. GGCTATGAAATGACTGTTTCAAGTGATTTAA 49030 29 96.6 31 ............................T AACCCATCTTGCATATTGCCCCAATCTACAC 48970 29 100.0 31 ............................. TTTCCAGCATGCTCATAAGCATCTGCAACAG 48910 29 100.0 31 ............................. GCAAATAAAATATCCTCTCGGAATAGCCCAA 48850 29 100.0 32 ............................. GTGGGTTTATATCTCTACTATAAAAAATGGAA 48789 29 100.0 31 ............................. CCATGTGAATAATAAGTAATCCAAATATCTT 48729 29 96.6 31 ............................T AAATTCCCAAATCCTAGAATGTAGAAAATGA 48669 29 100.0 31 ............................. ACTTAACCCAGCGAATAAAGCAGATCGGGAA 48609 29 100.0 31 ............................. TCCACGACGTTTGATGCAGTACGACAATGCA 48549 29 96.6 31 ............................G TCCAACGGTGTGTATCGATGATGTATTCATC 48489 29 96.6 31 ............................T GCTAATACTAAATCGATAGCTGATCAACTTA 48429 29 96.6 31 ............................T AGTACATAACTTTCTTTATAGAAATTCAGAC 48369 29 100.0 31 ............................. TGAATTAAACCCCTGTATTAATGCCAAAGGC 48309 29 100.0 31 ............................. TTGGGTTTTTCTTTGGTAATGGCTTAACTGA 48249 29 100.0 31 ............................. TGAATTGTAAGGTCCTTAATCATCTGATCTT 48189 29 100.0 31 ............................. GACAACTCCCCAGTAATTTCAGTTACATCAA 48129 29 96.6 31 ............................C TGAAGGAAATCCGACTGGTGGTCAATCTATA 48069 29 96.6 31 ............................T CCATTACCCAACCAATAGCCTCAATCAATTG 48009 29 100.0 31 ............................. TTAACACCAGATGGTCAACCAGCGCCTTTTG 47949 29 96.6 31 ............................T GTTACCCCCGAAAGAATTCCTTTAGCCAGCA 47889 29 96.6 31 ............................T TTAGCCAAGAATGCAACAAGTAAACACGCGA 47829 29 96.6 31 ............................T CGACGATTACCACCACGCCCTTTTTTGATTT 47769 29 100.0 31 ............................. ATAGCTGCACCTACTGCCGCATTCTGTGCTG 47709 29 100.0 31 ............................. GTATGACGATGTACTTGTAATTTCTGTACAA 47649 29 100.0 31 ............................. GTTTCTATATGGCTAATGGTTAGCGCAACAC 47589 29 100.0 31 ............................. TCACTTGATAGCGTATCATAGGTATATTCAA 47529 29 96.6 31 ............................T GAAAATGGTATGAATAAAGGCGTACCACAGC 47469 29 96.6 31 C............................ CATTATGCGAACTTTCAGACGCTAAAATTTA 47409 29 96.6 31 ............................C CCGTGATAAGCCCATAACTATGTAAGCCCCA 47349 29 96.6 31 ............................T GCAATGGCTTACCATCACCAGTTGTCTTATA 47289 29 96.6 31 ............................T GGCTTAAAAATGAACTTGTTAATGCAATTAA 47229 29 96.6 31 ............................T ACTACGAAGAAATACCAAACTGCATAGATGA 47169 29 96.6 31 ............................C GCTGCAATCAGATCACGTACAGATGAATCAG 47109 29 100.0 31 ............................. AAGCACCAGATAAAATATCTTCAATACTTAA 47049 29 100.0 31 ............................. TCAAATGTTTTATAAGTCTTTGCAAGATGAT 46989 29 100.0 31 ............................. ATAGTCGGACGGTCACCCTTCACCGGGATGG 46929 29 96.6 31 ............................T GTTGGTGGGGGCGGTTCGGCTCCTGATATGA 46869 29 100.0 31 ............................. AAAGACGATGATGTAAGCTATATTCAAAAAA 46809 29 96.6 31 ............................T TTAGTTGTTTGCACCAATTTAGCAATACAAT 46749 29 96.6 31 ............................T GAAAGACACATGGGATGGCGTGGCTAAGCAA 46689 29 100.0 31 ............................. ATCCGCAAGCCCACTAATTACATCACCCAAT 46629 29 100.0 31 ............................. CGTGAAAATAGCAATCTGATTAATACGGCAT 46569 29 100.0 31 ............................. CCACAAGCCCTTTGCTTCAATAGCTTAGGGC 46509 29 100.0 31 ............................. AGCACTGTTGCATTTATCTTTCATATTCTGA 46449 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 46389 29 96.6 31 ............................T TGTATTGTTGCTGACTTAAACCAATTCTTAC 46329 29 96.6 31 ............................T ATATCCATTCCCCAGCCTGAGTCTTTACAAC 46269 29 96.6 31 ............................T ATATCCATTCCCCAGCCTGAGTCTTTACAAC 46209 29 100.0 31 ............................. ATTGCTTCAATAAGCTGAGTCACAGCCATAA 46149 29 96.6 31 ............................T TTGTAACCACCAGTTAAAGTATTGACTAAAT 46089 29 100.0 31 ............................. TTACTCGAAAGCAGGCTTTTGAGTATTTGAA 46029 29 100.0 31 ............................. CAGGGGTCAAGTTCAGAAGATTTACGTTACA 45969 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 45909 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 45849 29 82.8 31 ...GC....T...C..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 45789 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 45729 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 45669 29 75.9 31 A.CGC.......CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 45609 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 45549 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 45489 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 45429 29 89.7 31 ....G.......C...............T TCATCACATAGCCTTTTACACGCATCTTGCG 45369 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 45290 29 82.8 31 ....G.......CC..........A...T GATAGTTCGGAGCATGTAAATCTCCAAAATG 45230 29 82.8 30 A..TA........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [45205] 45170 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 45110 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 45050 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 44990 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 44930 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 44870 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 93 29 95.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTGGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGATACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTGAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [71-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //