Array 1 580-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGUD01000222.1 Patulibacter medicamentivorans strain I11 contig222, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 579 36 100.0 36 .................................... TAGTAGGCGGCGGTCTCCCAGTAGCGGTGCGGACCG 507 36 100.0 42 .................................... GGCTACCAGAGTCGATGCGCGGGAAGCCCGACAGGCCCTTGG 429 36 100.0 35 .................................... ACTCCGATGCGCTGCTGCTCAAGCGGGTCCTTGAC 358 36 100.0 35 .................................... CGAGGGGGTTCGAAGCATCTGCGCGAACTCTGGGC 287 36 100.0 35 .................................... GGCCAGCCGAGTAAGAACCTCGGCAAGGTCAGCAA 216 36 100.0 37 .................................... ACCTTGGGCGGGCGCTCGATGATCGCCAGGGGCCACT 143 36 100.0 35 .................................... ATGTCGGGGTGGTCGTCCTCCATCTGGCGACGGGC 72 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 8 36 100.0 37 GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Left flank : AGGCCCTCCCAGAGCGGGTTGCCGTTGATGTCCTTCTGCAGGTCGGAGGCGATGAGCACGGCCATGGGCGACCTTCCATGGTAGGAGGCGGGCGGCGGCGGCGTGTGACGGGGGCTCGGCGCGACCGAGTCGCCGGACGGCCTGCCTCTGAGCGGGCCCGCGCTGCGACCCGGCAGTCAGCGGTTGACGCAGCGGCCCAGGACGGTGGCCAGCAGTTGGTGTCGGCGACGGGGGCGCCTACGATCGTCGGTGGTCCCGCGTGGGGCGCGTCGGACGGCCCGAGCCGTCGTTGGCGCGGGACGATCGGTCGAGAGGTCGGCACCGCGCGAGCGGTCAGGTGGCGCGGAGAACCCTGGGGAGCGCTCGCGTCGGAGAATGCCTGCAAATCGACGCAATCGGCAGGCCCTCTTCGTCGAGAGCGCTGTGCGATGAGCCGGAAGGGCGGAGCCCTCGCGTCAGCCTGCAAAACTCCTGGAAATCGGTGGCTGTTCTTGGGAGCC # Right flank : CAGCTCGACGGCGCCGGGGATCGTGTGCGCGTCGGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 1210-11 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGUD01000353.1 Patulibacter medicamentivorans strain I11 contig353, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1209 36 100.0 38 .................................... ACGTTCGGCGTGAACCTCCGCTTGCCCGCACCGTCCGT 1135 36 100.0 35 .................................... CTCCGGGCTACCCATCGCCCTCCTCCGTCCCCGTC 1064 36 100.0 35 .................................... ACCCTCACGATGTAGGTCTGCTGCGCCAACGGCTC 993 36 100.0 37 .................................... CCGACCACGAAGGAGCTCGGCGATTTCTCCCGCCAGC 920 36 100.0 40 .................................... ACCAGCCCCTCAAGGGCTGCCGCCGCAGCGTTTTGCTCAC 844 36 100.0 36 .................................... CGGTCGATGGCGGACAAGTTCGGTCCGCTGGCCGGG 772 36 100.0 35 .................................... GCGATCCAGCGGGTCCAGCCCGCCGACCGCGCGCT 701 36 100.0 35 .................................... CTCTCCCCGCTGATTTCTCGCGATCTCGATGGCCC 630 36 100.0 39 .................................... GCAGGATGTCGCGGAGGGCGCGACGGCCGGTGCGGACCC 555 36 100.0 38 .................................... CAGAGCCGCCAGCGATGCTCGTTAGGATCGGGTGTTGC 481 36 100.0 36 .................................... AGCTCTTGCAACGCGGACGTGTTCTGCTGAAGCTCG 409 36 100.0 35 .................................... GGCTACCAGCGGCACGATGGGACCGATCAGGCCGG 338 36 100.0 39 .................................... GATACCCAGCTTGCGGCGCTTAGGGAGCTGGTCGCGGAG 263 36 100.0 37 .................................... TGGCCTGCCGCAACGGAGGTGCGGGCGACCTCGGCCT 190 36 100.0 37 .................................... GAGATCTACAACAGCCACCTGGATGTCGACTTTGCGG 117 36 100.0 35 .................................... TGGTCTTCGGTCTTTGTACAGGCGCCGTGGTCCTT 46 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 17 36 100.0 37 GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Left flank : CGTAGAAGCAGCTCGACGGCGCCGGGGATCGTGTGCGCGTCGGTGG # Right flank : CGGTGACGTCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 1-554 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGUD01000163.1 Patulibacter medicamentivorans strain I11 contig163, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 1 36 100.0 38 .................................... GGTGACGTCGCGAAGTCGCTGGCCGACAACCTCAACAG 75 36 100.0 37 .................................... GGCGTCCGCGTGTCCGACAAGAGCGCTGCCGCCGACC 148 36 97.2 36 .............A...................... TCCGTCGCAGGCTACGACGGCCAACCGATCACCCCG 220 36 100.0 36 .................................... CTGGTCATTCGGACCATCCGGTCCGTCGTCGGCGCC 292 36 100.0 45 .................................... GATACCGAATATCGCGGCAGGCACGCGGTCGATCTCGAGGTCCGC 373 36 100.0 39 .................................... ACGCTCGTGGTCGCTGGCCACCAGGCCGAGGCGCTGCCG 448 36 100.0 35 .................................... GACCGGCCCACGACGATCCCGGCCGACACGTGGGA 519 36 91.7 0 ..............G...A.A............... | ========== ====== ====== ====== ==================================== ============================================= ================== 8 36 98.6 38 GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Left flank : | # Right flank : CGCGATGATCTCCGGCAGAGGCGGGACCCATCGCGGCCTTGCCGAAACAGCTTTCGCAACGACCCGGCCCGTGGAAGCACGCACAAATCCCCCATGACCAGACCGCCCGCCGCCCAAGTTCTCGACGACGACTTCCGCGCGCTGCCCGGCAATGACCTCATCCTCGCCGGCATCACGGATCTGACTGTCGGGGACGACACGATCGAGGCCGCGTTGGTCCTGATGGCGACGACCAAGCTGCGGGCCGCCGGCCTCAATGTACCCGCCCGGAGCCTTGAGGTCCCTGCAGGACATCGGCTCTACGACCTGCTGTCAGAGGCAGATCGCGCCACCGCCCACGACCGCTACAACGGCCTCGTCGGGCGCCTGAGCAGTTTCCTCGACGCGGTGGACCATGCGTCCGCCCGTTGACGTCGAGCGCATTCGGGCGCTCGCGGTCGTGCTCTCACGTGCCACCCGCACCGAGACCGTGCTGTACCTGACAGGCGGCGCGACAGCCG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.70,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 14644-12175 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGUD01000163.1 Patulibacter medicamentivorans strain I11 contig163, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================== ================== 14643 36 100.0 36 .................................... GACCAGCCACACCGTCTCGGTCATCGGCGCAGCCCT 14571 36 97.2 35 ...............C.................... ATCGACGTCAGGACCTGCTGCGTCTTGGTGGCCTC 14500 36 97.2 37 ...............C.................... TGCGCCGATGGGCGGCAACGTCGTTGGCGGCGGCGTA 14427 36 97.2 36 ...............C.................... GGAGACGTCGATGTGGGCGGTCGGGCCGACGGACGA 14355 36 97.2 35 ...............C.................... GGCCACTCGCGATCGCCCACCTCCACGAGGTAGTC 14284 36 100.0 37 .................................... CGAGCCACGACGCGGTCTCTGGATCCCAGCCAGCCTC 14211 36 100.0 37 .................................... CCCTTGGCGTCCACGACCTCCTCACCAACCAGCTGGA 14138 36 100.0 37 .................................... AGGTCGACGGGGAGCCCTACGGATACCACCCGAAGTG 14065 36 97.2 36 ..............................C..... GATGCTCTCCCAGGTCCAGATCGCGACGAAGAAGTT 13993 36 97.2 39 ..C................................. CACGAGCTACGGCGCAGCGCTGAGGCCGTCCAACAAGGC 13918 36 100.0 35 .................................... AACGGGTCAGCGCCGCCCCGGGTGAAGTTCGACCC 13847 36 100.0 54 .................................... GTGCACGGCCATGGCCGTCGGAACCACCGCACCACCCCTCAGCTCGGATGATCG 13757 36 100.0 37 .................................... CGCGTCTGGACGCGGACGCGACGGTCAAGGTCGAGAC 13684 36 100.0 37 .................................... ACGAGTAGACCGCCAGCATGTAGGACCCGAAGGCGTT 13611 36 100.0 37 .................................... TCGACGACGCGCCCGCGGTCGGGGAACGCCGCGGCCC 13538 36 97.2 37 ..............................C..... ACCGGCCCTCGACCAGCAGCGTGATCAGGTTCTTGAT 13465 36 100.0 36 .................................... CGAGCACGGAGTCGGGACCTTGAACGGGCCGAAGTC 13393 36 100.0 37 .................................... CCTGAGATGAGCCGACAGACCCCCGTTCTGCTGCGCC 13320 36 100.0 35 .................................... ACGTTGCGGGCCGTCGCCGCGGTGCCGTCGCTCTG 13249 36 100.0 35 .................................... GTCGCCGTCCTGCGCAAGACGGAGACCGCGGAGCA 13178 36 100.0 34 .................................... GACGCTGACCGAGATCGGCGGAGACGGGATCCTC 13108 36 100.0 38 .................................... CCTGTTCGGACTCATGCCGCTCCTGACCGGCGGGCTTC 13034 36 100.0 39 .................................... GTGCCCGCCGCCGGTCCAGCGTCCCCAGTCCCCGTGCAC 12959 36 100.0 35 .................................... AACGCGGTCGACAGCGCGGCCGAGTGTTCCACGTG 12888 36 100.0 39 .................................... GGGCGGATCACCGCCTCGTCCGAGCGCACCACGTCAACT 12813 36 100.0 37 .................................... ACCTGGGCGTGTTTCGCGGCTTCGACAGCATGGTCCC 12740 36 100.0 38 .................................... CAGGCATCCGGGGCCTCCACGGGCTCGTAGGTGGCCTC 12666 36 100.0 53 .................................... GTCGCTCACGCATCCCGACCACGTAGTTCGAGTCCGACCACGTAGTTCGAGTC 12577 36 100.0 34 .................................... TATCCGACGGAGGCATGACCGTGGGCGCAATCGA 12507 36 100.0 40 .................................... ACGGGCCGACATGCAGCCGAACCGCACGCAGGACTAGCTG 12431 36 100.0 36 .................................... CGTGCTGACGATCCCCTCCGTGCACGCCGCATACCG 12359 36 100.0 39 .................................... GCCACGCCAAGGTCACCGGCATCGCGCCGGCCGTGTGAT 12284 36 100.0 38 .................................... GCCGCGGCCGACGCCGCGTCCGCCGCATCCGACGCCAT 12210 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================================== ================== 34 36 99.4 38 GCTTCTACGAAGAGGTCGCGGAGCGACCTGTACGAC # Left flank : CCCGGCCCCGGTCAGCGCCTGGTACTTGCGGTCGAGCTGGTCGATCCCGGCGATGCCGGAGCCCCCGAGCGGCGCGTCGAGGGCGTCGGGCACCGGATGCTCCGCCGTCGAGCCCGACCCGAGCCACGCCCAGTTGAACCCGTCGCGGTGGATCGTCGCCTTGACCGCCTTCAGCGCGGCGATCCCGTTGGGGATCCCGGTACCGGTCTGGTCGGGATCGAGCCCGAGGCTGAAGCCCAGGGCGGGTGGCTCGGGCGTGGGCTTCGGTGGCTGCTGGGGCTGCAGCCCGAGCAGGCTCAGCAGGAAGAGGAGGAGCGCGGTGATGAAGTCCATCTCCCTGGGAGGTTCGACACGGTTCGGACGAATCATGCGCCGACCTCGAGAGAAATGGACGATCGTCGAGAGTCGAACGTCGGCTGGAGCTCGCGGAAGGGCCTGCGCGACGCGGTGGCGCGCCTCGTCGGTGACCGAGGGTCGCCAACGTGTCCCTAAGTCCGTCG # Right flank : GGCTCGCAGAATACGACCTTCGTTTGCAGGGATTCTGCGCGGCCGCGCGAGGGGTGCTCATGAACGTGCGACATCGTGCCGTGACGCTCGGGCGTCGCGCGGCAGAAGCCTCGCCACTGCAGGGAATTCGTCGTGCGAGCGGTTCCCGGGAAACGGGGAACCACCGGACCGCTCGCGTCTGGGGTCACCAGATCGCCGGTTCGTCCTCGTCCGAGATCTTCGGGGCTCGACCTAGATGCTCGACCCGCCGACTGGCGCGGCCCTGGGGCGGTCCGAGGTCGAAGATCGCGACGTGATCCTCGTCGAGATGGAGCTCCCTGCGCAAGGCGGCCCGTAGGGCGACCAGTTCCTGGCGGGTGAGATCGCAGACGTAGACCGAGTACTGCAGGCGCTCGCCGTGATCGACGACGACATCGTGCACCCGCTTCAGTCGTCGCGGGTGGCGGACGTCGTAGGTGACCAGGAACCGGATCCGCTCGGCCATCTCAACGGGTCGTCAG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCTACGAAGAGGTCGCGGAGCGACCTGTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.50,-11.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 1 1216-11 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGUD01000348.1 Patulibacter medicamentivorans strain I11 contig348, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 1215 36 100.0 35 .................................... AGCTCGGTGGCGCCGGGGATCGTGTGCGCGTCGGT 1144 36 100.0 39 .................................... CCGGCGGTCGTGTGCTTCGCCACGTTCAGCGCGTCGATA 1069 36 100.0 37 .................................... AGTGTGTTGTTGCGGAAGTCGTCCAGCAGCGTCTTGC 996 36 100.0 36 .................................... ATCTCGCCGTCGGCCTGCAGCTCGTCGGCCTCGCCG 924 36 100.0 37 .................................... CCGTCCTGATCGACGACCATGCCCTTCGCGGTGGCGG 851 36 100.0 39 .................................... CCGACCGTTTCGCCGACCTGGCGATCGATAACGCCGAGC 776 36 100.0 36 .................................... GTGTCGACCTGCCACGCGTCGACCGATCCGGCCGGG 704 36 100.0 40 .................................... GGTGATGTCGCTACGCCGCATCAGGCTCGGTCTCCGCGCC 628 36 100.0 34 .................................... CGATCGAGTGCTGCAACAGCGTCACGCCCAGCCT 558 36 100.0 42 .................................... CCCTCCGTCCCCGTCTCGGTGTTCCCGGACGCCGCCGACAGG 480 36 100.0 35 .................................... TGGCGTGCGAACGCCAGAAGCGGCTTGCTGGCCTT 409 36 100.0 34 .................................... CCGGAGCCCGCCGCCGTCGACTGGCCCACCCACG 339 36 100.0 36 .................................... GCGATCTCGAGCGGATCGTCAAGAGCAAGGACGCCT 267 36 100.0 36 .................................... GTCGGCGTGCCGATCGACACCGGCCGGCGACCCCAC 195 36 100.0 39 .................................... TCTGCGAAGGTCTTGGCGTCCTCCTCCGCCTCCTCGCGG 120 36 100.0 38 .................................... GTCACGAACCTCATGGCACCAGTCCTACGATCCGACCG 46 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 17 36 100.0 37 GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Left flank : CGTAGAAGCAGCTCGACGGCGCCGGGGATCGTGTGCGCGTCGGTG # Right flank : CAGCTCGACGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 34-504 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGUD01000288.1 Patulibacter medicamentivorans strain I11 contig288, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 34 36 97.2 37 .............A...................... TCGATCCAGGCCGTGCAGCCTGCCGATCGATCGCTCT 107 36 100.0 35 .................................... ATCGAGACGCTGTCGCTCCTGGAGCGCGGCGTCCT 178 36 100.0 35 .................................... AACCGTGCCGCCGCCACCGCGCTGGACATGTCCAA 249 35 97.2 36 .............-...................... CAACAGATCGTCGGCCGGCGGACCGCCGTACCGGTC 320 36 100.0 37 .................................... GCGGCCGAGGAGGCGGCCCGGTTGCACAAGGCGGGGC 393 36 100.0 40 .................................... AGCTTCGCGGGCGACAAGTACACCCGCCAGCTCGGCGACA 469 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 7 36 99.2 37 GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Left flank : CGTCGCGAAGTCGCTGGCCGACAACCTCAACAGG # Right flank : GGTGACGTCGCGAAGTCGCTGGCCGACAACC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGGTCCCTTCGGGGCCTCTCCGTAGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.70,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [20.0-16.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //