Array 1 2292427-2288188 **** Predicted by CRISPRDetect 2.4 *** >NC_010545.1 Corynebacterium urealyticum DSM 7109, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2292426 29 96.6 32 ............................G GCGAAGTCCTTCAAGGACTCCATCATGAAAAT 2292365 29 100.0 32 ............................. ATCCCAAAATACGGAACAAAAGCGGCCAGCAA 2292304 29 100.0 32 ............................. GGGTGTGTAGACCCCTCATGGTTGAACTGTTG 2292243 29 96.6 32 ............................G TTGCGAAATGTAACATACGGGGCTAGGCGCCA 2292182 29 96.6 32 ............................G TCGAGTGAGAAGACTAAAGCTTCTCGAACAGG 2292121 29 96.6 32 ............................G GTTCTTAGCGAACTCCTTACTCATGCCCTTAA 2292060 29 96.6 33 ............................G CTCCCTGAGGCGCCGAAGGGCGACTTGGGGGAA 2291998 29 100.0 32 ............................. TACGGCAAGGAGCTGCTGGAGCTGATCCACAG 2291937 29 96.6 32 ............................G GCCGAGGGTGTGATGAAGCAGCTGGAGGAGTC 2291876 29 100.0 32 ............................. TCACGGCCGTCCCTAATGCGCTCAAACTCCTC 2291815 29 96.6 32 ............................G TAGCCAGGCTCAGGCACCACCACAGACGACAC 2291754 29 96.6 32 ............................G GCTCCAAAACTCGTTGAAGTCCTCGGTGTACT 2291693 29 96.6 32 ............................G GCGGCGTTACCGGAAATGAAGGCGGGCCTAAT 2291632 29 96.6 32 ............................T CAGAATCACGTTATCCGCCGGGGCGGGGGCGT 2291571 29 96.6 32 ............................G GCAAAGAAGGGATTCGATGAAACCTCGAGTGC 2291510 29 100.0 32 ............................. CCTTTACCACGCCATTCTGGGCTTGATTTGAG 2291449 29 100.0 32 ............................. TGTCTGCTCCGACTGCGAGAAGAAATTCGACT 2291388 29 100.0 32 ............................. ACCGCCGAGGACTCAAAAGGCGTTAACTCACG 2291327 29 96.6 32 ............................G AAAACGGCGCGTGGCCTGTCGTTTGAGCTTGT 2291266 29 96.6 32 ............................G AGCCTGGAGCGTCAGGTCGCCGCGTCCGAGCA 2291205 29 96.6 32 ............................G GAGCCCCCACTGAATGGTGGAGAAAAGGTAGG 2291144 29 100.0 32 ............................. CCGGGCGCGACGCGCCAAGTGCCAGCCCTGCC 2291083 29 96.6 32 ............................G GCCGCGTGGGAGATTCTGTCGCAGGCGATCAT 2291022 29 96.6 32 ............................G TGCGCGGAATGGAGAATATCCATTTCCCCTAG 2290961 29 100.0 32 ............................. CGCCACCTACCGGGGGCGGGCTACCGCCACCA 2290900 29 100.0 32 ............................. ACCACCAAGCCCAGGCGGGCGATCGACAGCCC 2290839 29 96.6 32 ............................T CATGACATCGGTCATTCGGCACCCTCCTTCAC 2290778 29 100.0 32 ............................. TGCGCTACGCGAACAACGGAAACTCCGTCACA 2290717 29 100.0 32 ............................. ACAGTCCCAGCCACAAACGCCAGAAAGGGCAC 2290656 29 100.0 32 ............................. CCCGCCCACGCGGCGACCGCGGCAGCCACCAG 2290595 29 96.6 32 ............................G GAAACCCACCCCCGTGACCAAGGAGTCCAGAA 2290534 29 96.6 32 ............................G TCTCATGGACGGAGCCGTCCGATAACTAGGCA 2290473 29 96.6 32 ....................A........ CACTTCAGCAGCCCACCGCCAGCCATAACCGC 2290412 29 96.6 32 ............................G GCGTGGAGCATGGTCGCCGGTAACGCTGATGA 2290351 29 96.6 32 ............................G GCCACTATTGGTGTGATCGCTACGGCGATTCT 2290290 29 96.6 32 ............................G GGGGCCCCGGTGATCGTCGCGGGCACGATCAA 2290229 29 100.0 32 ............................. AGCACAGGGGCAGAGGTTACGAAGCCGGTGGA 2290168 29 100.0 32 ............................. ACGTTGTGTGGGTGGTCTGATGATCCGCATAT 2290107 29 96.6 32 ............................T CTGAGCGTCTGGAAGAACTGGCGGGCGTTGAT 2290046 29 100.0 32 ............................. ACAGACGACTGGCGCACCTGGTCCACCGGGAA 2289985 29 96.6 32 ............................G CCGTGATCCACGGCGACTGCACCTACAACGAC 2289924 29 96.6 32 ............................G CTGTACATCGGCAACATGGCCGCCGAGAACCC 2289863 29 96.6 32 ............................G GGGGCTGCGAGTTGCTGTTTTCCGTTGCGGTT 2289802 29 100.0 32 ............................. ACCATGCGGTGGAGGCTGCAGGATTACACGAA 2289741 29 100.0 32 ............................. GCCAGACGCGAACTCCATAGCAGGAACCAGCA 2289680 29 100.0 32 ............................. CCGGACTGGACACCCGAACAGGTCGAGGAAGA 2289619 29 100.0 32 ............................. ACCGCGACGACGATCTACGTGGTGCTGAAGAA 2289558 29 96.6 32 ............................T GCCGGCAACGCCCTGGCAATCCTCACCCGTGA 2289497 29 96.6 32 ............................G GAGGGGCGCACCGGGCGCGTTTACTACCCCGC 2289436 29 100.0 32 ............................. AGGGGCAACGTCGATAGATTCTCTAAGGGTTG 2289375 29 96.6 32 ............................G CACGGTAAAGCCGGTTTCGTGATCCGTCGCCT 2289314 29 100.0 32 ............................. ACTCACAAGCACGGCACCGCGATTGTGGTGTC 2289253 29 96.6 32 ............................T GAGGCGCGGCTTGTGAACACATCGAGGGATGT 2289192 29 100.0 32 ............................. GACACGTCGGATAAAGCCACTGCTAAGGCTAT 2289131 29 100.0 32 ............................. ACGTTCTCCCACGCCCACTGAATCGCAGTAGA 2289070 29 100.0 32 ............................. AGGTCGGGGGTGAGGTCGGGACGGCCCATGTG 2289009 29 100.0 32 ............................. ATCACGTTCACCCCGATGCTGCGCCCGGGTGA 2288948 29 96.6 32 ............................G CCGAGGGTTGTTTCCTCGTGGTAGGTGATTCC 2288887 29 100.0 32 ............................. CTCCGAAGTCGGCGGGAAAGCGGTGATGGTCT 2288826 29 100.0 32 ............................. AACGCGCTACGCGCCGGGCACAGTAGTCGACT 2288765 29 100.0 32 ............................. CTACAGTGGGCCCCGGTGAGACGCATGGGCTT 2288704 29 100.0 32 ............................. CGACCACACAGACCCCGGCGCAGGCTTCCCAA 2288643 29 100.0 32 ............................. AGATCAATCACCTGCCCGATCGGCTCAAACGA 2288582 29 100.0 32 ............................. ACACTCCGGCAAAACACCCTCGGTGCGCAGCA 2288521 29 96.6 32 ............................T TCTGGACTGGTCCGCCCGGTTCGGGTTCGGCT 2288460 29 96.6 32 ............T................ AACCCCACCAACGGGGGTAGCAACGGGGGTAG 2288399 29 93.1 32 ............T...............G CCACCTACCAGAGCACCGAGACCACGTGGGCC 2288338 29 93.1 32 ............T...............G AGGGGTACGCCGAGGAACTGACTAAGCACCTC 2288277 29 96.6 32 ............T................ GCCTGCGTTACCGACAGCAGCCACAGCCCCGA 2288216 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 70 29 98.1 32 GTGCTCCCCGCGCCAGCGGGGATGAGCCC # Left flank : AGCGACATCGAGCTCATGTTGTGGAGTGAGCTTGAATTGACCTCTGCGGGCATTAATTGGGCGGGGGAGGGTGTGGACCAGTGATGGTGCTGATCGTCACCGCTTGCCCAGCCGGGCTGCGAGGGGATCTCACGAAGTGGTTGATGGAGCTCGCGCCGGGGACGTTTGTTGGTAGGCCTTCGGCGCGGATTCGTGAGCTTCTATGGGATCGAACGGTGGAGTTGTGCAAGGACGGCCGTGCACTGCTGGTCTACAGCAGCAATAACGAGCAAGGTATGGAGTTCCGCACGCATCGGCATGACTGGGAACCCACCGATTTTGACGGTCTTAAGCTCATGATGCGCAAAAGCGATAGTGAGAAAACACGACGCAGAACGGGCTGGAGTAGAGCCCGCCAATTGAGACGAAAGTACGAGGGCCGGTAATTCGGGACTGGGGATGGCTTCGTACAGTTGAAGCTAGAATGAGGCTTAGGCTCGAATATTCGCTGGTCGTCCAGT # Right flank : TCGTCCGTGCGCCTGTTCAGTGCCTCCTGGGCCTTCTGCAGTTCAGACTTCTCTGCCTCCTGCTGGGTACGCCACGCTTCCGTGTCCTGGCGCAGTTCGTTGCGTTCGGTTCGGTAACGGGCTGCTTCCCGGCGGGCGTCCTCGAGCTCCTTGCGGAACGATTCGGGGATATCCGGGGTTTCCTTAGCCTGCGTTTCTGGCGTGGTTGGCGTCGCCTCCTGGGCGTTAGCCTGTGCCGCCTGGTTGTCCTCGGCGGCGGGAGTGTTCTCTGCCATTGGGTTAAACCTCCTGGGCCTTAAGTTCTAGTGGTCGTTGCAACACTGATCTGAAGGGTTGGTGTTGGTGATGACGGTGTCACGGTGGGATCCACCGGTTGAGGAGATCACTCGGTTCCACCAGTTGGTGGTGGGTGATGGTTTGTCGGTGCGTGCGGCTGGGCTGGATCTGGGATGGTCGTTAGCTACGGCGTATCGGATTGCGCATCGTGATGGGTTACCACT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //