Array 1 33221-32887 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMSI01000021.1 Streptomyces asoensis strain JCM 4185 sequence21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33220 29 100.0 32 ............................. ATCTCCGTGTCCTGCTCGTCGCGCAGCAGCTC 33159 29 100.0 32 ............................. CTGAAGGACGAGGGCAAGCGCCTCGTCCTCGA 33098 29 100.0 32 ............................. CATGCCGGGCGCGATCCACCGGCCGTGACAGA 33037 29 100.0 32 ............................. GCCGCGAGGCAGCATCAGGTCGAGGCGCGGGC 32976 29 93.1 31 ..............T...........T.. AAGGGCATCGGCGTCGCTTCGACCCGAAGGG 32916 29 72.4 0 ........G...CC.A..CA..G...G.. | G [32906] ========== ====== ====== ====== ============================= ================================ ================== 6 29 94.2 32 GTCCTCCCCGCCGACGCGGGGGTGCTCCG # Left flank : ACAGCTGATGTCGGAGCACCCCCGCGTCGGCGGGGAGGACCGCAGGGTGGTGTACGACACCAGGTCCTGTGGCGGAGCACCCCCGCGTCGGCGGGGAGGACGGCTCGGCCTTCTTCACCACGTGCTTGCTCGCCGGAGCACCCCCGCGTCGGCGGGGAGGACCGGCCCACGTCGCGGACCGGCTGTCCGTCTGGCGGAGCACCCCCGCGTCGGCGGGGAGGACGCCGCCACCGTTCCCGTCCGGGACCTCGACCACGGAGCACCCCCGCGTCGGCGGGGAGGACCTGGTCGTGCCCGAGCTGGACGCCGTGTGCTGCGGAGCACCCCCGCGTCGGCGGGGAGGACGACACACCGAAGCGATCATCTGCTCAAATAGCCGGAGCACCCCCGCGTCGGCGGGGAGGACCAGAGGTAGCCGGCGGGCGGCGGGGTGGGGACCGGAGCACCCCCGCGTCGGCGGGGAGGACGAGAGCGTCCCGTAGCTGAGCCCGGACCGTTCC # Right flank : GAAGCATCACTCGGAAGGCGCCGGATGGAAAGAGTGGGCAGGACGGCTGTCTGGCGCGCCGCTGATATCTGGTGGGCATTACGAGGTCGGTTCCTTGTATCCCCGGCCCTCGCGCTCTGCCGGTTGTCAGTGCCGCGTCCTACCGTGGTGGGGACGGCGCTTCGCTAGGGAATGGCGGTAGTGGGTGGCGAACCTTGTCTGGCACACGAAGCTGCGCATCCATCTCGATTTGACGCTGGAAGACCTCGGGCACGAAGAGCACGAGGGCCTGTGGGACATGGTCTACGGCATGGACCGGATGTACTCGGCCCGCGCCGTTCCTGTCGCGGAGCGGGACCTGCAGTGCGGGGGCGTGTGCCAGGAAGCCGGCGTGGTCGCGCCGATGTATCTGCGCATGCGTAACGGACGCAGGGAAGCGGTCCACGAACGGCGGGAAGACGAAGACCGCCACAGCGTTCCTGTCAGCGACGAGCACAAGGCCTACCAGGAGCGGATCCTGC # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGCTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 33254-35111 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMSI01000021.1 Streptomyces asoensis strain JCM 4185 sequence21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 33254 29 100.0 32 ............................. GTCCCCACCCCGCCGCCCGCCGGCTACCTCTG 33315 29 100.0 32 ............................. GCTATTTGAGCAGATGATCGCTTCGGTGTGTC 33376 29 100.0 32 ............................. CAGCACACGGCGTCCAGCTCGGGCACGACCAG 33437 29 100.0 32 ............................. TGGTCGAGGTCCCGGACGGGAACGGTGGCGGC 33498 29 100.0 32 ............................. CCAGACGGACAGCCGGTCCGCGACGTGGGCCG 33559 29 100.0 32 ............................. GCGAGCAAGCACGTGGTGAAGAAGGCCGAGCC 33620 29 100.0 32 ............................. CCACAGGACCTGGTGTCGTACACCACCCTGCG 33681 29 100.0 33 ............................. ACATCAGCTGTAGTGCGAGCCGCGGTAGACGCG 33743 29 100.0 32 ............................. CTCCGCGACTCCTGCGCTGCGCCGGACTTCCT 33804 29 100.0 32 ............................. ATGAAGGCCAGCCAGTTCCGGGCCGGTGCCGC 33865 29 96.6 32 ........................T.... CACGTCCAAGCGCTCGTTCAACTCCTCGACGA 33926 29 96.6 32 ........................T.... ATGATCGATACGACGTGGCGCGAGAGCCTGAT 33987 29 96.6 32 ........................T.... TGGTCGTCGATGTTCTCGGGGTATGGGAGGCG 34048 29 89.7 32 ..T........GC................ GCGTCCGGCTTGACGCGGGGCCGCACGAGGTT 34109 27 93.1 32 .................-......-.... GTCCCGCCCTGGTCCCCGGACTCGCCGCTGTT 34168 29 86.2 32 .......TT.....G............G. GAGCCCGCCGGGTAGTGGGTTGCCGGGGTGAA 34229 28 86.2 33 .......A........-T......T.... AACGAGTCGGCCTCGATCACCGTGGCCGTAGTG 34290 29 89.7 29 ................TA......T.... AAGTGCCGGCCGGGGAACGGCGCCGCCTT 34348 29 96.6 32 ........................T.... GTCCAGGCCGTCGGCTCGACGATCAAAGGCTT CT [34351] 34411 29 89.7 32 .C............T.........T.... AACGGGACACCGTCCAAGGGGCTGATGCAGGT 34472 29 93.1 32 .....................A..T.... TCCATCGCCCGTATCCAGTCCCTGGCCCGACG 34533 29 96.6 32 ........................T.... ACGAGCCAGGTGTCCATGTGGTTCATCCTGTC 34594 29 96.6 32 ........................T.... TCCCAGCGGAACCCGCGCCGGGACGCGACGGC 34655 29 93.1 33 ...........G............T.... CCGGTAGCGGCCCCGATCGGGAACACGGCTGAG 34717 29 93.1 32 ....................A...T.... GACGGCAAGACCGAACCGTACGAGTGCGTGAC 34778 29 96.6 32 ........................T.... CCGCCGCCGACACCGCGGCCCGCATCCTCGGC 34839 29 96.6 32 ........................T.... GCACCGGAGAGGAAGGGCTATGCCGACGTGGC 34900 29 93.1 32 ..................A.....T.... CTGATCCCCCGTCGCATCTTCCTGTCCGACCC 34961 29 96.6 32 ........................T.... CTGTACTCGGTGATGACGTGGACGTTCGCCAC 35022 29 93.1 32 ...................A....T.... TCGACGTCGAAGCCACAGCCCCTGCCGACCTC 35083 29 89.7 0 ..T...........G.........T.... | ========== ====== ====== ====== ============================= ================================= ================== 31 29 95.5 32 GTCCTCCCCGCCGACGCGGGGGTGCTCCG # Left flank : GCACTGACAACCGGCAGAGCGCGAGGGCCGGGGATACAAGGAACCGACCTCGTAATGCCCACCAGATATCAGCGGCGCGCCAGACAGCCGTCCTGCCCACTCTTTCCATCCGGCGCCTTCCGAGTGATGCTTCCGCAGCCCCTGCGTGGGGGCCCGGGAGGACCCCTTCGGGTCGAAGCGACGCCGATGCCCTTCGAAGCACCCCCGCATCGGCGGGGAGGACGCCCGCGCCTCGACCTGATGCTGCCTCGCGGCCGGAGCACCCCCGCGTCGGCGGGGAGGACTCTGTCACGGCCGGTGGATCGCGCCCGGCATGCGGAGCACCCCCGCGTCGGCGGGGAGGACTCGAGGACGAGGCGCTTGCCCTCGTCCTTCAGCGGAGCACCCCCGCGTCGGCGGGGAGGACGAGCTGCTGCGCGACGAGCAGGACACGGAGATCGGAGCACCCCCGCGTCGGCGGGGAGGACGGAACGGTCCGGGCTCAGCTACGGGACGCTCTC # Right flank : GTCCGCGCCCTCGGTCAGCACCATGCAGCCCAGGTTGAACGCCTCCCGACACCGAACCGGCCGAGGTCGCGCCGGCGCCAACCCGGTTGACCGGCGTGGCCACAGCGTTAGGAGGCGTCGTCGACGGTGCCGGAGAGGTGGTAGGCCGCGGAGGTGTCGACGCCGAGGCCAGCGAGCAGGTCGAGCGCGGCGGTGAGGGGCGGGGCTCCGGCCACGCGGGCAGCGGCAAGGTGGGCGGGGAGGCGGCCGGCGGCGATCAGGGCTGTCCACTGGGTGGCGGAGAGGGCGAGGTAGCGCAGGCCGGGGAGATCGGCCAGCAACGCCAAGTCCGGCGTGGGGCAACGGGACAGGTCGAGGGAGCGCAGCGCAGGCAGGGTGCGCAGCGGGGCGAGGTCGGTCGGGGTCTCCGAGCCGACGGCGAGTGAGGCGAGGTGCGGGTGGTCGGCGAGCGGCATGAGGTCAGCCTCGGAGGCGAGGTCGATGGCCAGGTCCTCGACGGG # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGCTCCG # Alternate repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGCTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 36950-37231 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMSI01000021.1 Streptomyces asoensis strain JCM 4185 sequence21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 36950 32 81.8 34 .....-..................C....ACGA ACCGGTTGCACAGCCACGTCCACGTCGCGAACGC 37016 33 87.9 28 .......................A.....CAG. GGGGCGAGTGGGGCCCGGCCCCCTTCCA 37077 33 97.0 28 ................................C GTCCGGCCGGGCCGAGTTCCGCGGGTTC 37138 33 90.9 27 .........A...................C.G. CCGCTCGCTGGTCGACGCGGGAGAGGT G [37167] 37199 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================== ================== 5 33 91.5 30 GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT # Left flank : CCCCGGGCTGCAGCGCGCCACGGAACACCACCAGCTCGAAGGCGCCCGACGGGCGGCAGGTCAACTCCAGGACGATGGACTCCCAGCCGTGGCTCTCCCGGAACCAGGACGCCAGTGCTGCGAGGCTCTGGTGCAGGGACGGCAGCCTGAAGAATAGGCCCGGCCGGCTCGGCACCACGTACCCGCCGCCGGCCAGGCCGGTGCTCGCCCGGCGCCCATACCCCCGTAGCACGCACTCCGTCCAGCCCTCCGGCGCCTGGGCCACGACCTCCGCCGTAATCTCCCGCGCCGCCTGTTCCACCGCCAGGTCCATGCCCGCCCTATCGCCCGCACTGTTCGGACGATCATGTCAGCAGGCTGCGACAGAGCGACCGGCAGCCAGTGCCGACGAGTCGCTGCTGCGCCTGCGATCAACCATCCACGGCACCGCCTCGACACCCGAGCAGGGCTCGCCAGCGCCACCCCGGCCAACCTTCTCGGTCACAGCACTAGCTCGGCCG # Right flank : TGGAGAGGCTGATGAGCGCGACAGCTATGGTCCTGGCATGACACAAGGGTTCGATCTTGCTGCGTCTCTTGCCAGAGGCGTCGAAGGCCGCAGTAGTGCATGGAGATTCATTCGGGGCTTCGCCGCCCACTGGGTCAGCGCCCTGGAGAGCGGTGACGGATGGGCGGAGACCGATCTGGTCGCTGCCGAGGAGAGGCTGGGTGTGCTACTTCCGGCGGCGTTGCGTGAGGCGTATCTGCTACTCGGGCGCCGCCGGGACCTCACGAGCAACCATGATGTGCTGCTCGGCCCGGCCGAGCTGTATGTGGATCACGCCAAGGAGGCCCTGGTCTTCCGTCACGAGAACCAGGGAGCCGCATCCTGGGGCATCCTCCTCGACAGCCTCCAGAGTGACGACCCTACGGTGCATATCCGGTCTGACCTTGCAGACAAGAGCGCCGAACGGTGGGAGGACTGGCTGGAGCGTCTTTCCCTCTGCTTCATCGAGATCGTTCTGTCCG # Questionable array : NO Score: 3.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:-1.5, 6:0.25, 7:-0.02, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.42 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //