Array 1 179342-180366 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FAXS01000035.1 Campylobacter coli isolate H060260417, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    179342	    36	  94.4	    30	.GG.................................	CAGAGATAACGAGTTTAATTATACTAGAGA	
    179408	    36	 100.0	    30	....................................	CGACCCAATATTTTTCGTTGCATTATCTAC	
    179474	    35	  97.2	    30	........-...........................	AGAAAAAAATTCTAAAATTACTTGACAATT	
    179539	    36	 100.0	    30	....................................	CTCATAGGAAGTTTTAATCTTGGCAACTCA	
    179605	    36	 100.0	    30	....................................	TTTGTCAAGTTTCAAGCGAAGAAGCAAAGA	
    179671	    36	 100.0	    30	....................................	AAAAGTTTCTTGCGTAAAAACATTTAAGTT	
    179737	    36	 100.0	    30	....................................	ATATCCATCTTTCATATCTTTGATTTTAAC	
    179803	    36	 100.0	    30	....................................	ATTAGAAGCTGCTTTGTTGTGATTTCAGGA	
    179869	    36	 100.0	    30	....................................	TTAAAAGTTTAGGAGTATTTGCTACAAGAG	
    179935	    36	 100.0	    30	....................................	AGATTTTTCATTTAAATGATGATGAGTTAA	
    180001	    36	 100.0	    30	....................................	TAAAAAAGAGTTTTCCCTTGTAATGTTTTG	
    180067	    36	 100.0	    30	....................................	TATAAAAATATGAAAATAGTATCTTACGCA	
    180133	    36	 100.0	    30	....................................	TCCATTCTCATAAAATATTTAGCCATTATT	
    180199	    36	 100.0	    30	....................................	TTCAGTTCCAGCAACTCCTTGAATTGTAAT	
    180265	    36	 100.0	    30	....................................	TGTTCTACTTTCAATATCTTTTATAGTTTC	
    180331	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	  99.5	    30	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   GCCGACATAAAACCAGGTAGACATATCAAAATAGCTAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCAGCCATGGTGATGTTTAATCTTTATGCAAGAGAGATTTTAAACTCTTGGTTACTTCAACCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGTTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGCAATATAGAGTTTAAAAATGGACGCATTTTAGCCAATCTTGAAGGCAAAAAAGAAGGCTCTAGTGCGATCATAAATAATCTTAACAATAAAGCTGCTCTTATGGTAGTACCAAAAGAATGTGAAATGTTAGAAAATGAAAGCTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTTGCAACCTCCTTTTAGTGGAGTAATTAGCCCTAGCGGAGTTTCAATCCACTA
# Right flank :  TAGATATTTACCAGATAATGAAAATTTCGGGGTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCCGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCATTATTTGAATTTTTATATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAACTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACACTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTATTTCTAAATTTACTTG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:77.78%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.68   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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