Array 1 47794-47345 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFLH01000023.1 Acinetobacter baumannii strain 4300STDY7045795, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 47793 27 85.7 32 TAA...-..................... TGCTCCTGACGAGCTAAGACGGCGCGGCCACT CC [47783] 47732 28 100.0 32 ............................ ATTGAAGAAATCAGGAAGAATGCTCCAGAGGG 47672 28 100.0 32 ............................ AAACTAAAAATACAAATCAGTTGTTTTGATAT 47612 28 100.0 32 ............................ TAGATTGTATGTAAATGATGCCAGTGCATCAA 47552 28 100.0 32 ............................ ATTGTGGTAAGCTGTTGCATTAAATTTTATAT 47492 28 100.0 32 ............................ TCATAGATAAATAGACAAAAGGGGCCGTTAAG 47432 28 100.0 32 ............................ ATTGGATGCCATTACCCAATCCACCAAAAGCA 47372 28 89.3 0 ..........A.G..............G | ========== ====== ====== ====== ============================ ================================ ================== 8 28 96.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : AGCGTTTCAGTCTGGACAAGTGCCGGTATTTTTAATCAGTCTGAAAGCAGGAGGGGTCGGTCTGAATCTAACTGCCGCAGATACGGTCATTCACTATGATCCATGGTGGAACCCTGCTGCTGAAGATCAAGCTTCAGATCGTGCATGGCGGATTGGACAGGACAAGCCGGTATTTGTCTATAAGCTGATTACTAATAAAAGCATAGAAGAAAAAATTCTTGCCTTACAGCAAAATAAAGCAGAACTGGCACACTCTATTCTAAGTACAGATCATGAAGGCGAAGTGAAACTGACGGAAAATGACGTGATGAACTTGTTTGAGAAATTTTAGTTTGGTTTCAGATTACCCTAATCATCTGTAAGTATCTGAAAGTCTGGATGCAATTTTTTCCAATGTTCTCTTAATTTTTCTTTATGAACAGAAATCATAGGTAAGTCTAGTAATAGCACTGGCCATACTGACCGTGCTTTGTCCATGATCGCGTGAAGTTGTTTTTCAA # Right flank : TATTATTTTCAGTTATACTTATGCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTGCGATTATCCGCTAATTCGTCGGTCATCCCAATAACACGGCACTACAATCAAATGGTTCTCATGTAACCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATCAGTAAGGTAGATTTCATATTGTCATAACGACTATATAGAACCTTATGTACCATCTCTAAGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACCAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTCTACTGTTATGCAGAATGTTGCGAATAATTGATGCACTCAGATGGGTTTTACC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 19889-12229 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFLH01000015.1 Acinetobacter baumannii strain 4300STDY7045795, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 19888 30 100.0 30 .............................. TAGCTAAAGAAAGCAGCTTTAACCCATTTG 19828 30 93.3 30 ............................TG TTATCGTTTGACCGTCATCGGTCTTAGAAA 19768 30 93.3 30 ............................CA TATTTATCTCCAAGGGTTAAAAACCCATTA 19708 30 100.0 30 .............................. TGCGTGTTTGTAAGCAAAATCCAGAGGGTA 19648 30 93.3 30 ............................CA GCCATCAGTACGTAAAGAACGATAGAAATC 19588 30 93.3 30 ............................TC GTTAATGCAATCAATAATAAGCCTGTTGGC 19528 30 93.3 31 ............................CA TCAATAAAAATAACTGATGTTTCTGGTGTAT 19467 30 93.3 30 ............................TC TGCAAATTACGAGCGAGCACACCGCATTGA 19407 30 96.7 30 .............................G ATGCATCAAGAACGAACTGTTGAAGATGTG 19347 30 100.0 30 .............................. TCACTAAAATATCTAACTCAGTTCTTAAAG 19287 30 96.7 30 .............................A TCGGTTAAAGATGCAAATGGTGAACAATCT 19227 30 93.3 30 ............................GC TTTGATCAGTAACTCAATGTATGAGTCATC 19167 30 100.0 30 .............................. ATCGAAAAATGGGAGTATAACCATGCATGA 19107 30 100.0 30 .............................. CGCAAAGATCATTAATCAAGGTCATGATGC 19047 30 96.7 30 .............................A AGAAATCAAAGACTTATCTGGTCAGGTTGA 18987 30 100.0 30 .............................. TGGTCAAAATCATTCACACAACCATTCACA 18927 30 96.7 30 .............................A TCGAAGAAAAGGACCGTCGGTTCTTAGTGC 18867 30 100.0 30 .............................. TGCGTTTTTGAAAGGTCGCCATTGTTTAAA 18807 30 93.3 30 ............................TC AAATGAACATTATTTGTGGTGAAAATGGGG 18747 30 96.7 30 ............................T. CTAAAAATTCAGGCTCATTACTAACGCCCT 18687 30 100.0 30 .............................. CTGCATTCTGAAGTGGAGTTTCTTCTAAAT 18627 30 96.7 30 ............................G. GAGTGTCGGTAGGAATTTCAATCCACCATC 18567 30 96.7 30 ............................T. GCCGCAATATCTCAGAAAAGCAAGATCAGT 18507 30 100.0 30 .............................. GATAGTATCTTGGGCGCAGGCAAAAGGAGC 18447 30 93.3 30 ............................GC CTTGTCGCTGCTCTTGCCGGATAATCGTTC 18387 30 96.7 30 ............................C. GCATGGATCTATTACGACATCTGTACAGTT 18327 30 93.3 30 ............................TC TTCCGTGTTAACAATTGCTTGAGCTATTGA 18267 30 93.3 30 ............................TA ATTGAAAATGCTCAATATGTAAAAGATTTT 18207 30 100.0 30 .............................. GGTGTAAACGACAATCTCTTAACCTTCCCC 18147 30 93.3 30 ............................TA AAGGTTCCTACTAACTACAATCCAGCAACA 18087 30 93.3 30 ............................TA ACGGTGCACGAACTGTTATTAGCGGCAAAA 18027 30 93.3 30 ............................TA CAGACCGAACACTTCTAAATAACTATGCCG 17967 30 96.7 30 ............................G. TACGTCTACGGTACGTGGTTAGCATGATTT 17907 30 93.3 30 ............................TG TAAATATTCGTTTTTATTTTTTTAGGTCAT 17847 30 96.7 30 ............................T. GCTCTAAGCATTCCGAAGCAAGGAAATGTG 17787 30 100.0 31 .............................. CACATTTTGGGATGGCAATAGCATTATTTGT 17726 30 93.3 30 ............................TG ATCTTTGCAACCAAGCATTCAACGAATCCA 17666 30 96.7 31 .............................A TTTCATGCTTATGTGCTAAATTCATATTTCA 17605 30 96.7 30 ............................G. GTATTACCGTCATTTTTATGATGGTACATG 17545 30 96.7 30 .............................G TATCCGTTGCATTAATCGCTTTGGCTCAAA 17485 30 96.7 30 ............................G. GTTGTAATTTCGCTTGTATTGATCATTGCC 17425 30 96.7 30 .............................C ATACCCCATATAACGGTTATTGTAGTTGCT 17365 30 93.3 30 ............................TA TGATCTATACATTACAACAAGCAACACAAA 17305 30 93.3 30 ............................TC AATGTTATATCACATTAGATTAACAAAACA 17245 30 93.3 30 A............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 17185 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 17125 30 96.7 30 ............................G. CGGTCGAATGTCTGGGACTTTTTTGTTATA 17065 30 96.7 30 .............................A AGGCATACACCCAGTAGAAGATAAACAAAA 17005 30 100.0 30 .............................. ACCGAAAGATGACAAAAAGCACCCTAAGGT 16945 30 96.7 30 .............................A GTGAAAAAAGCTGACAGCAAAATAAACTCA 16885 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 16825 30 96.7 30 ............................G. CCAAGTCTTAAAGATGTTCAATGGGCAATG 16765 30 96.7 30 .............................A TCGAATCAAAATATTAAAGAGTTACGTCAT 16705 30 96.7 30 .............................A TTCGTGTTGACCAGGAATTAAAAGACACTT 16645 30 96.7 30 ............................C. CAAAGTATTTAACACGGTTGTTAGCAGGAT 16585 30 93.3 30 ............................CA AAAAAGAGCTTGCATATACAGATTCTAGTA 16525 30 96.7 31 ............................T. GGTGTTGAACAATGCTTAAGTGAAATCACAA 16464 30 93.3 30 ............................TA TATCAATCTTGTTAAGAGAAGCCGCATCAT 16404 30 96.7 30 ............................G. GATGTGTATGTTCTATTAGTGGTGTAAATC 16344 30 96.7 30 .............................A TCCCGCTTAGAACTTGTAAACAAAATTCTG 16284 30 93.3 30 ............................TA GTCCCGAAATTTCAGTAGGTGGCTCATAGC 16224 30 96.7 30 .............................A TCCCGCTTAGAACTTGTAAACAAAATTCTG 16164 30 93.3 30 ............................TA ATACACCAATCCCGCTTAGAACTTGTAAAT 16104 30 100.0 30 .............................. CATCATTGCAGTCTTATAAGAGCCAGGCTG 16044 30 96.7 30 .............................A ACTGCATAGATGACCATTAGAGACATCCCC 15984 30 96.7 30 ............................G. AGTGGGGACATTGTGTACGCTCATGATGTT 15924 30 93.3 30 ............................TC ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 15864 30 93.3 30 ............................TA CTAACTGTAAAACAGAAGACTTGCCAACTT 15804 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 15744 30 96.7 30 .............................A TGGCATTTGCTGCTGACGGGGATTTCGACT 15684 30 96.7 30 .............................A ATCAAAATCGTGGCAGATAACAAAGCGATC 15624 30 93.3 31 ............................TA ATCTCGGTATTTACGCCAAGGGCGCTATTCA 15563 30 100.0 30 .............................. GATCTACCCTTTGAGCTAGATAAAACTTTT 15503 30 96.7 30 ............................T. CACGTGGTACGCGCTGTAAGCCTGTTTGTT 15443 30 93.3 30 ............................TG AGTATCGCAAATCAAACATTGCCAAGCTTT 15383 30 96.7 30 ............................T. AGATAAAGCAGGGGATAAAGGGACGTTAGC 15323 30 93.3 30 ............................TG TAATACTAGAATCTGTATATGCCAGCTCTT 15263 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 15203 30 96.7 30 ............................G. GTCGGGTAAAACAAGGGTAATGACTTGTGT 15143 30 93.3 30 ............................TC TACAAAGGCAATCTGGCTCTTCAATTCGTG 15083 30 96.7 30 .............................C TTTAAGCGCAAACGAACAGCATCAAGATCA 15023 30 93.3 30 ............................TG TTTCATCTGTCTTGATAGCTTCCCCCATAA 14963 30 93.3 30 ............................CA CTACGGACATAATCGAACATTTCCTGAAGT 14903 30 96.7 30 ............................T. GTGCGAGTGTCTACGAGCCAAGCCGAAATA 14843 30 96.7 30 .............................G TTGCTACTGAATTAGTTGTTATTGCTAAAA 14783 30 96.7 30 ............................T. AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 14723 30 100.0 30 .............................. TAATATAGCTTCTTCCAACTACAATATATT 14663 30 93.3 30 ............................TA TTTGCTACGCCACCAGCCATACCTAGAAGC 14603 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 14543 30 96.7 30 .............................A CGTCAATTCAAACGTAAAAAGCTACTGAAG 14483 30 96.7 30 ............................G. CAGTATTACTCCACACTTTTTATATTTCAC 14423 30 93.3 30 ............................TG TACCTCATCAATAAAAATAACTGATGTTTC 14363 30 100.0 30 .............................. AAAATCAACCCGTATTAATACCGAATGCAC 14303 30 93.3 30 ............................TA ATAAAGAGGTTTTTAACTGGTATGAATCGA 14243 30 96.7 30 ............................C. CATGACGATGCTTTTCTAACAAAGTCATCC 14183 30 93.3 30 ............................TG AAAAACGTAACGCTGAATTGCAGGCTAAAA 14123 30 93.3 30 ............................CA GCTAATAAATTTACAAGAATCTGATGTGTA 14063 30 96.7 30 .............................A CTGAAGTGAAAATTGTTCATTAATGGTTAT 14003 30 93.3 30 ............................TC ATAGTTAATATAAATTTATTATGACAAAAA 13943 30 96.7 30 ............................T. AGCCGTTTGGACTTTACCAATCTATATTTA 13883 30 96.7 30 .............................G CAATATCAATTACAGGAATACCACCAGCAT 13823 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 13763 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 13703 30 93.3 30 ............................TG ATGCGGGTTGTCCACCAGTTATGACTACTT 13643 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 13583 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 13523 30 96.7 30 .............................G TGAATGGGATTTATTCGCAAGGTGATATTA 13463 30 96.7 31 .............................A AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 13402 30 93.3 31 ............................TG CATCGAAGTCATAGAACGCTTTGAGTTTCCA 13341 30 96.7 31 .............................G CGACTTTGAATTGATGCCATCTCCGCCTTTA 13280 30 93.3 30 ............................TA TTCAGATTGGCTGCGGCCTCACCTGTAGCA 13220 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 13160 30 93.3 30 ............................TC CATTCTCGCTAAGTGGCATCACACGCGATG 13100 30 96.7 30 ............................T. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 13040 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 12980 30 100.0 30 .............................. CATCGAAATTTAGTTCTAATTCTTTAATTT 12920 30 93.3 30 ............................TC ACTTCTCTTAATTAGTGCTGAAGAATCAAA 12860 30 96.7 31 ............................C. GAATAAGTGAGATGTCTCTATGAGTTCAATT 12799 30 100.0 30 .............................. TGAATTAATACGGCTTACTGCAATTGGTTG 12739 30 96.7 30 .............................G TCTTTAATGTCGGCAACATGCTGTGCAAAA 12679 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 12618 30 96.7 30 ............................T. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 12558 30 96.7 30 .............................C TGGAATTCAGCAGTAAATAAGGGGTTAAGA 12498 30 96.7 30 ............................T. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 12438 30 93.3 30 .......T.....................A CGTGAACAATTGTTTTAGCTTTGAACATTA 12378 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 12318 30 90.0 30 A......A.........T............ TTTGATCTTTACTTATTCTCGCTTCAAACA 12258 30 70.0 0 .......A...T.....T..C...AGCGT. | ========== ====== ====== ====== ============================== =============================== ================== 128 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //