Array 1 989-1311 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTV010000005.1 Coleofasciculus sp. FACHB-1120 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 989 37 100.0 36 ..................................... CCTCAGTGGAGCTTTGGATCTGACCTCGCAACGCTT 1062 37 100.0 35 ..................................... ACAATAGCTAACAAAGCCAAAGCTAATCTGTTTGT 1134 37 100.0 33 ..................................... TCGTCCCATTCGGTTTCTGGAATATTCCGGCTG 1204 37 100.0 34 ..................................... CTGCCGCATCACTCACCCGGTCAAAGTGGCCTCC 1275 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 99.5 35 GTTTCATCAACCCTCCCGCCTTGGGGTGGGTTGAAAG # Left flank : GGGTTTGTTTGACTGTCGGAAGACAGTCCTACTTTCTGAACCCTGGTAGCTACCCGGCCATGATGCTGCCCCTATGAATACCTTCTTCATAGGTCGGGAAATTCCCGTGTATGAATACTGGAGTATATAGTATACAGGAAAGGTGCGCTCCCAGCAAAATGAGGTGAGGCTGAGGGAGAAGGTAAGTTTTCCCAAAGCCCTAGCCCTTGTTAACAAAGGTGCAGATTACTCATCCTTGCTAATAAGGGTGCGGATTACCGCAGTGGTGGCTCCGAACTCGTCCCCTTCGGGGGAGCCCTCCCTAATTTTTTTCTGACGGCTGAAAGTGGGATCAATATCCCTGAGTAGCCGTCAGACATTTAAAACTCTTGTCCCGTCTTGATTTTAGATGTTCACGGCAGTAATCTTTCTCCTTGGGAAAGAGCTGAAATGACTAATTTAAAATCAGCCGACAAAAATGTATTTGTCAGCTTGTTTAGACAAGGGTTTCAGCGGGCGCG # Right flank : TGTGATGGAGCTGCGCCAGCACTTGGAATAATAATAGTTGTAGATAGTGTCACCAACTTAGGGGGGTTGAAAGGAGCGCTGCGATCACACAAACCGACTGTTCACAATCAACAACGACAATAATTTGCGAACAGATGCTCAAGGGGGGAAAGCGACATCAAACTGCCAATAACGACATGATTGTGCGAAAAACGACATTAATCTGCAAATCGCGACATTTAATTTGCGAACGTACAGTTATACAGCTGCGCCAGTAATTTGAATAATAATAGTTGTAGATAGTGTGGCAAATTTAAGCGAGATTGAAAGGTTCGCCTACTTTGTAATTAAATTCGCTCGACGACATTAATTTGTTAACGGTTGTCGGCACTAATTTAAGGACACGAATTTGTTAAAAACGACGTTAAGCGACATTAATCTGTTAATGACGACAAATAATGTGTTAATCGACATTTCTAATGGAGAATAGGGAACTCGAATCCCTGACCTCTGCGGTGCGA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCAACCCTCCCGCCTTGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 73386-68129 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTV010000017.1 Coleofasciculus sp. FACHB-1120 contig17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 73385 37 100.0 36 ..................................... ACAAAACTGTGTACGCAAGTTTGAAACTGTTTAGAA 73312 37 100.0 35 ..................................... CCTTTACTAACAATTAACTATTATGGTTCAGCAAC 73240 37 100.0 37 ..................................... ACAGAGCATTGGTTGAGCGAGTGGAACCGGATAAAAA 73166 37 100.0 34 ..................................... ATAGAGAGGATATCTACATACAATCCCTATGAGT 73095 37 100.0 35 ..................................... AAAGCTAAATTCAATCGTCAAGGCTACACAGTGAC 73023 37 100.0 35 ..................................... GATTTCCATTCGACCTTATCTATCCGATTAATCCA 72951 37 100.0 35 ..................................... ATGCCCAGGACACGCTACTCGGAGGGAATAGCCAA 72879 37 100.0 34 ..................................... AGAACGAGACTCCTTCAAAAGATGGGTGAAAGTA 72808 37 100.0 35 ..................................... ATAATTGGCAGGCTTGACCATATGATAATAAGTCT 72736 37 100.0 36 ..................................... AGATTTGGCTGACTCACTAAATCTATCGTTTACAGG 72663 37 100.0 36 ..................................... TGGTAAGACCATTCGCGCCGTCAGCTTTGCCGAGAG 72590 37 100.0 34 ..................................... ATAAACCGCCGTGACTTCTAGCGCTTTTATCCAC 72519 37 100.0 33 ..................................... GTTGATAAAATGCTTAAAGCTTCTCCATCTAGC 72449 37 100.0 35 ..................................... ACTTGATTAAAGTATCGATGACTCTAGATGTAACT 72377 37 100.0 40 ..................................... AAAAGTTGACTGAAGTTTATACTCAACTCCCCAATTTATA 72300 37 100.0 34 ..................................... ACAGCCACGATCCGAGTAGGTTTTGGGATCTCGA 72229 37 100.0 36 ..................................... TCACCTGGCTGATAAACTCGACCAGGCTTATAAATA 72156 37 100.0 35 ..................................... TGATTAAAAGTAGCGGCAGCAGGAAAACCCGAAAA 72084 37 100.0 39 ..................................... AAGACATCATACAACCGTCAAGGATTTACAGTTAATCAG 72008 37 100.0 35 ..................................... ACTAGCTAATAGAGGGAATTAAGTTAACTATTCAG 71936 37 100.0 36 ..................................... TTATCGGGGATGCAAGCTCTGTGCAATGCCCATCTG 71863 37 100.0 34 ..................................... ATGTCGCACTGACCGCAAAATCTGCTTTTAGCGA 71792 37 100.0 35 ..................................... CACCTCGTCCAACGCCAACGAGTACGGGTCAAACG 71720 37 100.0 37 ..................................... GGCATTGGGGACAGGGTTGGCTATCTACGCATCAAAG 71646 37 100.0 34 ..................................... CCTTCATCGGTTGTTTGAGCCGGTGGATTGCTTT 71575 37 100.0 35 ..................................... GAAATGTCCAGATTGCAAAAGCAATAATTACAGGA 71503 37 100.0 36 ..................................... CATCCACCCTTGAGGATTCGCCAAAGCACCAAGCAA 71430 37 100.0 37 ..................................... TACTTGCTGCTCCTTTTGTGAGTACCCCGGTAATGGC 71356 37 100.0 34 ..................................... TTCTGTCCATTTAATAATGTCGCTGGCGTAAAGC 71285 37 100.0 40 ..................................... GTTACAAATCCCAGTGGATGCGTTATCTGGGAGCGCAAAA 71208 37 100.0 36 ..................................... CAATCATTGGACGCAACAAAGCACGCACCGGGGTCA 71135 37 100.0 39 ..................................... TTCCCGATCCAGCTGAGAGGGAAGCGCGACGGCAAGCAG 71059 37 100.0 35 ..................................... ATCACAATTTTTACAATTGCCGGGTAAAATTCTCC 70987 37 100.0 35 ..................................... ATCGTTGTTTATTCCGTCTCTTGCACTTGAGCCGA 70915 37 100.0 34 ..................................... ATATAAAAATTGCGCCGACCGAACTAACCAACGA 70844 37 100.0 34 ..................................... GTTCAGGAGTACAACCCAGCTCGTGAATAAGCCG 70773 37 100.0 34 ..................................... CTTTAACAAGTTCTGCCTTTTCTTGAGGCGATAA 70702 37 100.0 35 ..................................... ATTGATTGGCACCAGGCGCGACCTTGAAGGCATCA 70630 37 100.0 35 ..................................... TTTTCTTTCCATACGCTCGGAGGAATAATAGACAT 70558 37 100.0 35 ..................................... TAGTGTTAAAGAAGCTCAAACCAAGCTGCAAGAAG 70486 37 100.0 34 ..................................... GTAAGTTTTCTAATCGGGTAAAGCGAGATAATAA 70415 37 100.0 34 ..................................... TTTGCTGAACGTATAAGAACCGCCAAAGTCCTCA 70344 37 100.0 36 ..................................... TGGGTTGCCCATAACGCTAGCGGAGGATTAACGAGT 70271 37 100.0 35 ..................................... TTCTCTCGAAACCTTAAAGGCGTGGCGCTGGGCGG 70199 37 100.0 39 ..................................... TTATCGGCAACATATTCTCCCAGCGCCCCAAGGTCAGAA 70123 37 100.0 40 ..................................... TTGCACTCGGTGGGTAACACCGGTTTAAAATGCCAATCCC 70046 37 100.0 35 ..................................... GGTTTTCGAGATACCCTAACTCTACTTGACCTGAG 69974 37 100.0 34 ..................................... ATGAGTCAAGCCCTGAAATGCCCCAGTTGCGGGG 69903 37 100.0 37 ..................................... AGCAAAGAGCTACCTCGACCAGATTCTCAAATGTGAG 69829 37 100.0 34 ..................................... GCATCGCTAGGAACGTTGCCTGCTTGATGTTCAG 69758 37 100.0 40 ..................................... ATGACTCCCGTTGATTCTCAATCCTTCCACTACTACACTG 69681 37 100.0 34 ..................................... TTAATTGGATTCTTCTGAAGTTTTGGATCTCCAA 69610 37 100.0 36 ..................................... TGGATGCTACTGTTGATGTTCTTGGTGAGACTGAAA 69537 37 100.0 35 ..................................... GGGCTAGCCGTTCTGAACGATTGAATTGGTATCAA 69465 37 100.0 35 ..................................... TTAGTACAGACTCCATCCCAGGTATCAACCCAGTG 69393 37 100.0 36 ..................................... GCGTTCGCGTCTCAATCCCTGGAAAGAAGCTGGCTA 69320 37 100.0 34 ..................................... AGCGAATCCTGAATCTGAATTGATACGAGTTAGA 69249 37 100.0 36 ..................................... GGGTCGTTGGGGTTCGCTCCCCCCGCTTCCGCTCAA 69176 37 100.0 34 ..................................... ACTTTTAAAATGATTAAAGCTTTTCGGTAAAAAA 69105 37 100.0 35 ..................................... ATGTCTCCCGTTGATGCTCAAGCTTTTCATTACTA 69033 37 100.0 36 ..................................... CGGTTGCGGTGTCCCGGTCGGGCTGCGGCTGCGGTT 68960 37 100.0 35 ..................................... AATCACCACCGGCTGATGGGTGGGTGGGTGGGCTT 68888 37 100.0 35 ..................................... ACTTGTTGCCGAACTTCCAGCAATCGCGCTCCCAA 68816 37 100.0 33 ..................................... ATACCGATTCCCTGGACAGTAATTTCAACCAGG 68746 37 100.0 35 ..................................... AGATAAATCCTTGAATCATTTTGTTGGGGAGGTCG 68674 37 100.0 35 ..................................... GCCAAGTCAAAATGCTGTAGTAAAAAAATGCATCA 68602 37 100.0 37 ..................................... TTATTCTTGGTTGCTTCTGAATCCTCGCTCTTATCGA 68528 37 97.3 36 .......................C............. AAAAAAATAAATAGCGGGGCTGGAAAAAGTTACCAG 68455 37 97.3 37 .......................C............. ATCGAAGCGCCTATCTTGTTCTTTGAATAAATCATGT 68381 37 97.3 33 .......................C............. CACTTTCTGACCCACTTTCTGACCCACCGTTTT 68311 37 97.3 34 .......................C............. GACCTATCTTTGACTTGTCGTACTGATGGTCAAT 68240 37 100.0 38 ..................................... ACCTTCTCCCAACCAGCGGGGAGTGAAGGATCAGGGTT 68165 37 97.3 0 ...................................G. | ========== ====== ====== ====== ===================================== ======================================== ================== 73 37 99.8 36 GTTCCAATTAATCTAAATCCCTATCAGGGATTGAAAC # Left flank : ATTCCAGAAGACAAGCGGCGCACTAAAATCCACTCCATTCTCAAATCTTATGGGCAGTGGATGCAGTTAAGCGTATTTGAGTGTGAGCTGACAGATACCCAGTATGCTAAATTGCGATCGCGCTTGAGCAAGCTGATTAAACCCGATACTGATAGCATCCGCTTTTACTTTCTCTGTGGCTGTTGCCAAAGAAAAATAGAACGGATTGGCGGAGAACAGCCACGAGATGAAACTATCTTTTTTGCCGAATGCGCGGATGGGTAGGTGTTCAGCTAAAACGGGGAGCAGAAACTGGCTGAAGCACACCGCGTACAAGCATTTGACCTTTGTGGTGAACAATTCATCTTCCGCGCAACTTGTTTTTCGCTTTACTACCAAGCGTTCCAGCGAAAAAGTGTTTTCGCCTCTTGCTCACCCCACAGCCTCAAATGATATGATTATCTCAATTCACGCAACAGTACCTCGAAAACTAAATACAGCAAGCTTTTTCGGCTCCCGCC # Right flank : GAGAACAGGACAAAACCAAGTCAGCAGAAAAGCGGGTTGCCATGAATCTAAATCCCTTAATTTATGGCTATATAGCTATCTATTATTAATCAGGATTCATATAGACTCTACTAGAATCTCGATAAGAATTTAGCAATAATAATCAGCTAAAATATGTGCTGAATCTATGTTTTAGAAAATGCCAGGACGGAGATTTGAACTCCGGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAGCTATCCCGGCGCACTTTTTTTGGTGCTTTATTAAATTAACAAAGTTAGAAGGTGTTGACAAGCCCCTAGTGGCAGATTGGTTAATATTTTTAGTTTTTGCCAGAGATTCCGGTTGCAGCAAGGGCGATCGCTATCTTTATGACGATTCCTGAAAAGGACAGATATCTGAATATCTGTTCAGATGTTATAGTAAATGAAGAGTTGACTAGGACAAAGCAATGACTACCGTAACTTCGATGAAATGTGCCTGTGAATCCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //