Array 1 2505425-2512413 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHMC010000001.1 Micrococcus flavus strain DSM 19079 Ga0104578_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 2505425 29 96.6 32 ............................G TTCGCCTTGTCGACGCCGGCCGGGTAGTCGAA 2505486 29 100.0 32 ............................. ATGTGCACGGTGTTGCCGGCGGACCCGTAGCA 2505547 29 100.0 32 ............................. TCGCCAGGCTTGCGGCCGAGGGGGTCGTTGTG 2505608 29 100.0 32 ............................. GTCACGGCCACGAGGCGGCCCCACCGGAACAC 2505669 29 100.0 32 ............................. TCCTTGACCGCGTCACCGGCCTTATCCATGCC 2505730 29 100.0 32 ............................. TCGTGCTCTCCGATCCGGACGATCATGGTCCG 2505791 29 96.6 32 ............................G GTGACGGCCTCCAAGGCCCTGTTCGCGGACGC 2505852 29 96.6 32 ............................G CTCACACCCTGCCCGGGCCCGTTCGAGGTGAC 2505913 29 100.0 32 ............................. CGTCTCGTCCAGGTGTCGCCGCCGTCCATGGA 2505974 29 100.0 32 ............................. GTGCAGATCACGAACTTCCGCACGGAGGACGC 2506035 29 100.0 32 ............................. CGGAGTAGTCAACCCGCTTGAGGGTCCGCCAG 2506096 29 100.0 32 ............................. CCCGGCGGCGTCGGGCACCTGTGGGTCAAGGC 2506157 29 96.6 32 ............................G GTGTCCCACGGCTCCATCCGCTCCGCCAAGAC 2506218 29 96.6 32 ............................G ATGTCCTTGACGGTCAGGCCCCACCAGGTCTC 2506279 29 96.6 32 ............................T CCCCGTGCCAACCGATGGGAATGGAGAAACCG 2506340 29 100.0 32 ............................. AGGATCCAGGGCAAGACCGTGGACCTCACCGC 2506401 29 96.6 32 ............................G AAGCGAGCGCCGGTGGCGTCCCGGTAGCAGAT 2506462 29 100.0 32 ............................. CCGTCCTGCTGCAGGACCAGCAGCCGGTCCCC 2506523 29 96.6 32 ............................G TTGGCGCCGTCGTGGAACTCCACCTGGCACCT 2506584 29 100.0 32 ............................. CATCCGCCCCCGAAGCACGGCTCCCCGTCAGC 2506645 29 96.6 32 ....................A........ TGGAATCTGGTGCTCAAGGGCATCATCGAGGG 2506706 29 100.0 32 ............................. CAGCGCTACACCCACTTCGACCACCCCGCGTT 2506767 29 100.0 32 ............................. CGATCGCTCGACGCGTCCCGCTGGGCGATGAA 2506828 29 96.6 32 ............................G GAGGGCATGACCCCGCAGGTCGACGTGTGGGA 2506889 29 96.6 32 ............................G TTCGAGCCGAGCACCCGGAGACCGTTGTCGTA 2506950 29 100.0 32 ............................. TACGTGGAGCGGGCCCGGTACCTGCTGGACCG 2507011 29 96.6 32 ............................G TCCCGGACCATGCCGAGGACTGGCAGGATGAC 2507072 29 100.0 32 ............................. CTGCCGTGGACGTCCGTGACCGGGAAGCCGTC 2507133 29 100.0 32 ............................. TGGCAGATCGCCCGGCTCTGAACCGGGAGGTT 2507194 29 100.0 32 ............................. CACCAGCGGGGAAAGTGCTCGACCCACTCGCC 2507255 29 100.0 32 ............................. GCCGTATCCGTGAGCTCAAACGCCGGGAGATC 2507316 29 96.6 32 ............................G AGCGGGCATGGAAGAACGCACGTCAGCGGGAC 2507377 29 96.6 32 ............................G GCGTACCTCGGCGCGGACGGCGCCTGGCACGT 2507438 29 100.0 32 ............................. TCGTCGATGACACCGTGGGCGCCGGAGACGAG 2507499 29 96.6 32 ............................G GAGCTCGTCGACCGGCTCACCACCCACACCCC 2507560 29 96.6 32 ............................G AACGTGGGCGGGAGTGGGTTCAAGACGCTGGC 2507621 29 100.0 32 ............................. TTGATGAACTGCCGTCCACCGGCTTCCCAGTC 2507682 29 100.0 32 ............................. CCCTCCGTGCGAGTGCGCCGTAGGTCATCCTC 2507743 29 96.6 32 ............................G CGCTGGGCCACGTGCCACTCGGCCGCGTCGAT 2507804 29 100.0 32 ............................. ATCTCGGTCAACGTGCCGGGCGTGGACTTCTT 2507865 29 96.6 32 ............................G GCGGTGACGTAGTGCGGCCTCCAGTCGCGGAG 2507926 29 96.6 32 ............................T ACCGGCCCGGGCAGACCAACGCCCGCGGCACC 2507987 29 96.6 32 ............................G TGGGCCGTACGTGCCAGCGACGGTGAGATGTA 2508048 29 100.0 32 ............................. AAGTGGTGGACCGTCCGCGCCGTGAGCGACCG 2508109 29 96.6 32 ............................G GCCCGGCGCGAGCGGAGCCGAGACAACATCGC 2508170 29 100.0 32 ............................. ATACACGCCTATGGGGGAGGGGGCAACCCCCG 2508231 29 96.6 32 ............................G GAACTCCCACATGCGCCACCAGGAGAACCGCC 2508292 29 96.6 32 ............................G CACGCCCTCACCGGCGCCTTTGATGGCCGCAT 2508353 29 96.6 32 ............................G CCCTGGTGGCTGAGGCCCGCGTGCGCTCCACC 2508414 29 96.6 32 ............................G CCACGACACTTGCCCCGTGAACCATAGAGCGC 2508475 29 100.0 32 ............................. AGGGCGCGGCGCAGCTCCGGCCCCGCGTCCAC 2508536 29 96.6 32 ............................G CATGAGCACCGAGAACGTGGAAGTCCCCAAGC 2508597 29 100.0 32 ............................. AACGGCGGGGCGCCGGTGGCGATGCTCGGCTC 2508658 29 96.6 32 ............................G GGCCTGTGACCATGAGCGTGGACGAGCTGACC 2508719 29 100.0 32 ............................. GCGCGGCGGGCGAGCCCGCTGCTGTCGGTGAG 2508780 29 100.0 32 ............................. CAGAACACGTTCATCGGCGGGCGCTGGCACCT 2508841 29 100.0 32 ............................. ACCCGCCAGTCGTGGCCGTTCGACCGGACGGA 2508902 29 96.6 32 ............................G GTGGAGGGACACGGTCACGTCCGCCTTGATAT 2508963 29 100.0 32 ............................. CACGATGACCACCCAGACCCGCCCCCAGACGA 2509024 29 93.1 32 .........................A..G TGCTGCTGATCAACACCCCGCCCGGTGACCCG 2509085 29 96.6 33 ............................G ACCTCGCCCTGCTTGGTGATGCGGTAGTGCCCG 2509147 29 96.6 32 ........T.................... GTCCCCCGCGGCCGCGGCCCGGCTGCCCGCGA 2509208 29 96.6 32 ............................G TACCGGACGACCGGGACGGTGACCCTGCGGGG 2509269 29 100.0 32 ............................. TCCGTGGCCGCACGACTGGGAGAGGTGGGGGC 2509330 29 96.6 32 ............................G CCGTCACCTTCCAGGCCGGCCTGCCGCTAGGC 2509391 29 100.0 32 ............................. AGATAGGAGCCCTGAGATGGCCAAGGCTGACG 2509452 29 100.0 32 ............................. AGAAGTTCCACTACGGCCTGGACATGGCCGAC 2509513 29 96.6 32 ............................T GCCGTGTCGTAGAGGGTGAAAAGCTCACTGTC 2509574 29 96.6 32 ............................G CGGCCCCGCTCCGAGGTCGCCATGCAGACCGC 2509635 29 96.6 32 ............................G GGCTTGCCGGATCCCTCCCACCTGCAGCCGAT 2509696 29 100.0 32 ............................. TCACGAACGTAGGGGACGACGAGGGTGCAGGC 2509757 29 96.6 32 ............................T ACCGCCGGGCGTCCCGGCTGGAGATGTTCCGA 2509818 29 96.6 32 ............................G GTGCGGGTCTGCTCGCGGCCGGACCCGTCCGT 2509879 29 100.0 32 ............................. ACCACCGCCCGCGACCGCGCCAGAGCCCTAGT 2509940 29 100.0 32 ............................. CACGGGGTCACCGTCCTCAACGCCCCCGGGAC 2510001 29 96.6 32 ............................A CACTCAAGGGACCGGGTAGTACCGGCAGCTGG 2510062 29 96.6 32 ............................T CGGGGCTCGCCGTTGGCGTGCTCCCCGCCGCG 2510123 29 96.6 32 ............................G GTGCGGACCGTGTAGGCGTTGAAGCCGGGGTC 2510184 29 100.0 32 ............................. GGCTCCACGTTCATGGACAAGAAGACCGGGAC 2510245 29 96.6 32 ............................T TGCAGCGCGACCACGCGGGCGGTCACCCGGGC 2510306 29 100.0 37 ............................. CCCCCCCCCACACGAGGTTCGTGTAGGGGTCGGACAG 2510372 29 96.6 32 ............................G GCGGGCGAGAACCTGGCCCGCCTCATGGGGAG 2510433 29 96.6 32 ............................G CCGCCCGTCACCGCGGACACGATGCCCGCCCA 2510494 29 96.6 32 ............................G GCCGCAGCAGCAGCCGAGGCCGCCGACGCCGA 2510555 29 96.6 32 ............................G TCGCTGGGGCCTGCCCGCCCGGCCTCGCGGAC 2510616 29 96.6 32 ............................G TGGGGGTGCGCGGCGAGGTCGAAGTCGTCGGG 2510677 29 96.6 32 ............................G CCGGTGCCGCCACGGGACAACTCGAAGCCAGT 2510738 29 100.0 32 ............................. AGCGGCGAACACCACGGGCCGTTCCCCACCTT 2510799 29 100.0 32 ............................. CGGGGGAGACGTGCGTGAAATAGCCACGTTGC 2510860 29 96.6 32 ............................A CGCGCGCGCATAGTGTCAAGTGGTTCACGAAC 2510921 29 96.6 32 ............................G CTGGGCCGGCCACATTCCATCGAGCACGACCA 2510982 29 100.0 32 ............................. GCGGTGCACACGCCGCGGATCAGACGGGCCGG 2511043 29 96.6 32 ............................G AGTGCCGCCCATGCAGACCAAGCCCCTGTCCT 2511104 29 96.6 32 ..........A.................. GGGTCGATCACGGCCACCGTGACGGTGCGTGG 2511165 29 100.0 32 ............................. GATCAGCCACCAACCGAAGACCTTGGCGGCAA 2511226 29 100.0 32 ............................. TGCCGGCTCAGCGCGAGGCCATGAAGCGCGCA 2511287 29 100.0 32 ............................. GAGGTGCGGCCGACGGCCGCCGAGATCGTCCG 2511348 29 100.0 32 ............................. AACCCCGGCCCCGGTGACGTCCTGATTCAGCG 2511409 29 96.6 32 ...................A......... TGCAGCGCGTTGTCCAGCCGCAGGTGCAGGCG 2511470 29 96.6 32 ............................G TTCCGGCGCCGGTCTGCATGGCCTGGATCATC 2511531 29 96.6 32 ............................G ACGCGTGCGTGACGTTCGGCCCACGCAGGGCC 2511592 29 100.0 32 ............................. GGCGGCATCGGGTAGCCCTGCGTCAGGCTGTC 2511653 29 96.6 32 .........A................... GATCCGATGGTGACGCCCACGGCAGCCGCGCC 2511714 29 96.6 32 ............................G CGGTACGTCGCCACCACGGACGTGAACCGTCG 2511775 29 100.0 32 ............................. CGGTGGGCCCCCGGCATGGCCGCCGATGCGGT 2511836 29 96.6 32 ............................G GCACCGGACCCGTCGCAGCCGCTGCAGTACGC 2511897 29 96.6 32 ............................G GCCGCGAAGTTATGCGACGCCATGCCCGGGGT 2511958 29 100.0 32 ............................. GACGCGCCGACCCGCCGCGAGCAGGCGGCCGC 2512019 29 100.0 32 ............................. AGGGTGGGGGACAGGGCCCCCTGCGCGGTCGC 2512080 29 96.6 32 ............................G TCAGCGGGTGCATGAGGTGATCCTCTCGAGGT 2512141 29 100.0 32 ............................. CGCGACATGCTCGCGCTCGTCTACATGGCGAA 2512202 29 96.6 32 ............................G GGGTACGTGGACACGGCGGTGGGCGGCCGCGC 2512263 29 96.6 32 ............................T ACGTGGTGCCGGCCGCCGCCGGAGCGGCGCCC 2512324 29 96.6 32 ..A.......................... ACGGTGTGCGAGGACTCGTCGCCGTCCACGAG 2512385 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ===================================== ================== 115 29 98.1 32 GTGCTCCCCGCGCGAGCGGGGATGAGCCC # Left flank : TCCCTGTGGAGCGGGCGAGGCCAGCAGACCGTCCCCGGCGGCGTGAGCTACGGAGAGCGCGCATGATGGTCCTGGTCCTCACGGCGGCGCCTGCCGGCCTGCGCGGAGAGCTGACTCGCTGGCTGATGGAGATCGACGCGGGCGTGTTCGTGGGGAACCCGTCGGCGCGAATCCGTGACGAACTCTGGGCGAAGACGAAGCAGGACGTCAGGGAGGGGCGTGCCCTGCTCGTCTACACGGCAGCGACAGAACAGAGAATGCGCGTCGAGACGCACCGGCATCATTGGCAGCCCGTCGACGTGGAAGGACTGACCCTGATGCGGCGCCCGCTTCCGGAAGGATCCCGGCAGGATGGCCCGCAACGACGTACTGGATGGAGCGCTGCGCGGATGCGGCAACGCTCGTTGAGGCCGTCGTGGCGGCGCCAGCAAGACGGCCAAAGTGAATGAAACGCACGCCGAGGCGTGCGGCTAGGCTTGGAACCGGGCCAATTTTCAAGT # Right flank : CGCACCCAGCGCGGCCATAGAGGGACTGGTGCACGTGTAGGTGACAGCCATCTTCACGCCGCGTCTGCGGGCGTGTGGTCCATGATCAACTCGTACTCAACCGGCGTCAATCGGTCCAGGCGCACCTGCCGGCGGCGGCGGTGGTAGGTCCGCTCGATCCAGGTGATGATCCCGGCCCGCAGCTCGTCCCGGGTGTCCCAGTCGCATCGGTCCAGCACGTTCTTCTGCAGCAACGCGAAGAAGGACTCCATGGCCGCATTGTCCCCGGCTGAGCCGACCTGACCCATGGACCCGATCAGCCCGTGGGTGGTGAGGGCGTCCTGGAAGGCGGTCGAGCGGAACTGCGAGCCGCGGTCCGAGTGCACGATGCACCCGGCCA # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.60, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //