Array 1 18314-12942 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMUD01000031.1 Acinetobacter baumannii strain Pesh-05 S14MV_S38_L001_R1_001_trimmed_contig_31_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 18313 30 100.0 30 .............................. GTGAATAAGATATAGACTTATCTTTATCCA 18253 30 96.7 30 ............................A. TAAGGGATAGTTTGCTCATGCATGACAGTA 18193 30 93.3 30 ............................GC TTTTTGCTCTCTTACAGTGGTTCTTATAAA 18133 30 93.3 30 ............................AA CACCCACCATTGTTTCGGCTTAAAGAAGTC 18073 30 93.3 30 ............................CA ATTGAGCCATGCTTAGCAATTGATTTTTTA 18013 30 93.3 30 ............................AG ACAAATCTTGAACGGCAAAACCTTCCGGAA 17953 30 96.7 30 .............................A GACATGACCACGTAAAAGCAAACGGAACCA 17893 30 93.3 30 ............................AC AAAATGCAACTATGCAAGCTGGATTTCCGC 17833 30 93.3 30 ............................GG CCAAAAGAAGGGGAAGAGTGTTGTTACATA 17773 30 96.7 30 .............................C TTTGCTCTCAGCCTCATTATTTACACGAAT 17713 30 93.3 30 ............................AA ATTGATTGACAATGCCCCATGTTTTGCCAA 17653 30 93.3 30 ............................AG ACGGCACCAGCGTTGCTACTGTGGCTTATA 17593 30 96.7 30 .............................A AAAAGCCTAGTGATTTTAGAAATTTTTCAA 17533 30 96.7 30 .............................A ATGGTTTTTGCATCATATGGAACTGGTACG 17473 30 93.3 30 ............................AC TAAAGAAGTTAGAGTCAAAAACCAAACCAC 17413 30 93.3 30 ............................GC CACAGCATAAGCAATACTTCGCGCTGAATG 17353 30 96.7 30 ............................A. CCATAGCAATTTCAGACCGCATAGGCTTAA 17293 30 96.7 30 ............................A. GACAGGACATGACAAGGAGGCGGTATGAAA 17233 30 93.3 30 ............................AA TTAAATCCAATTTCCCTAAATCCTTGAACA 17173 30 100.0 30 .............................. ACTACCGAATACAAGGTGGAAAGAATGCAG 17113 30 93.3 30 ............................AA GTAAGCTGAACGTAGCCGCGACCATAATAT 17053 30 93.3 30 ............................AG ATCAATACACCATTGTCAGGTCTTGATACA 16993 30 100.0 30 .............................. GTTGAGCACCAAACCACGAAATATCAACAT 16933 30 93.3 30 ............................AA CCGCGCCAGATTTAGCAACAGTAAAGTTTG 16873 30 96.7 30 ............................G. TCAGGGTTGTATCTGTTAGGATATGAGTAA 16813 30 96.7 30 .............................A AGCTTTTTTTTGATTACTGGTAGTTTAATG 16753 30 100.0 30 .............................. TTGGAGCCTTGCCGCCATCTTCGATTTTTG 16693 30 93.3 30 ............................GC AACCGTTGGTTTTAAGTTAGACCTAATGGT 16633 30 93.3 30 ............................AC AAATGCATAACAGTATCGGTAGCTAATTGA 16573 30 100.0 30 .............................. GACTGTAAATTGCCCTGCTGGAGCAGTATT 16513 30 96.7 31 .............................C ATGTTCTTGAATTGGAGCGCAGACGAGATCA 16452 30 96.7 30 ............................A. TAATGGTCTTGACCGTGTTTACAACGAAGA 16392 30 96.7 30 ............................A. ATACACGCCAATCTTGATTGACAACATCAC 16332 30 93.3 30 ............................CC GTACATGTTGACGTAATCATGTTCATCCTT 16272 30 93.3 30 ............................AC GAATTCCTTTTGCGCATGGCGCATACCAAG 16212 30 100.0 30 .............................. GTGCCTCTTTGGTCAACTGTGACAAGCCAA 16152 30 100.0 30 .............................. AAACCCATACGCTCCAGACAACATTACAAG 16092 30 93.3 30 ............................GA CATGAGTGGGAATATGAGGAAGGTAATTTA 16032 30 100.0 30 .............................. TTAGCTCATTGCTGCGTTGCTCCAATTTAA 15972 30 100.0 30 .............................. CAGAAATCTTTTGTTGAGTGATTGGCGGAA 15912 30 93.3 30 ............................AG AGTCACAAATTTATTTAGGCAAGAAAAATA 15852 30 93.3 30 ............................AC CAAGCCCATTATTCGGGTTTACCGTATTGT 15792 30 96.7 30 ............................A. GCAGAATTAACCCACACAAATCAGCAATAA 15732 30 96.7 30 ............................A. GACAATGATAGCCATAAGACTATGCAATAG 15672 30 96.7 30 ............................A. CAACTTCCAAAGTCAAACCATTAGGAAGTC 15612 30 93.3 30 ............................CC AAAAGGGATTAAGTTCACAAAAGATTTGGC 15552 30 100.0 30 .............................. TTTCAGCCGCCTTCAACATGGCTTCAGCTT 15492 30 96.7 30 ............................A. GCCAAGCGAGATAAGGAAAAGCAAGATAAA 15432 30 93.3 30 ............................CA TCCTTAAATACTGAGATCTTTTTTGATCTT 15372 30 96.7 30 .............................C TGCACGTAGCCTTGCAACGCCCGATTCAAC 15312 30 96.7 30 ............................A. TGTGTTGTCTAAAACAGTCTCACCCTCATT 15252 30 93.3 30 ............................AA TGACATTTATTGAGTGGTGTTCTAGTGGCG 15192 30 96.7 30 .............................C TCGGCACAGGAGTGCATTCGAAGTTGATGA 15132 30 96.7 30 .............................G AATGGGTATTAGAACTCAGTGAAGATATGT 15072 30 96.7 30 .............................A CTGGCTCAGGCAGAGAAGGCATGTCAATGC 15012 30 93.3 30 ............................CA CTTGGGCATGTTCTTAGATCCAGACACAAA 14952 30 96.7 30 .............................C TACCTGCTAATAGCTTCTTTGCCCTAGTTC 14892 30 100.0 30 .............................. GCTTAACCTTCACGCCATTTGGATAAACTG 14832 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 14772 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 14712 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 14652 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 14592 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 14532 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 14472 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 14412 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 14352 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 14292 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 14232 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 14172 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 14112 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 14052 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 13992 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 13932 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 13872 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 13812 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 13752 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 13692 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 13632 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 13572 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 13512 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 13451 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 13391 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 13331 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 13271 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 13211 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 13151 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 13091 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 13031 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 12971 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 90 30 95.3 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //