Array 1 13289-10514 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDFM01000020.1 Companilactobacillus salsicarnum strain TMW 1.2118 seq20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 13288 36 100.0 30 .................................... CTTTGGACTAGCTCCCCATCTACCTCATCT 13222 36 100.0 30 .................................... CAATCAAGTTTTGTGAGCGAAGGTGCGCCA 13156 36 100.0 30 .................................... TTATTAACTTCTAATACACTTGCTTCAATC 13090 36 100.0 30 .................................... GCAATCACCACGAAACACCAGTTATCACAC 13024 36 100.0 30 .................................... CGCTATCAACTGGTAAGGCAAAAATCACTA 12958 36 100.0 30 .................................... TAAAAGTGCAAAAGTATTTAAGCGTTCAGG 12892 36 100.0 30 .................................... TGTCTTTACCACCTGAAAATGCGACAGTGA 12826 36 100.0 30 .................................... AAAAACCGGAGTTATTAGGCCACTACATTC 12760 36 100.0 30 .................................... TTGAAAAAGAAGCAACTAGCGGAACTATCC 12694 36 100.0 30 .................................... TACGTTGTACTTGAAACCCTTGTGGCGTGA 12628 36 100.0 30 .................................... GCTGCATAAATCTCATCTATGAAAGTGTAT 12562 36 100.0 30 .................................... TACATGATATTCCCCCTTATAGTCCCACTG 12496 36 100.0 30 .................................... TTGGATCGTTTACGTAGCGCGCGACCGCAT 12430 36 100.0 30 .................................... TTTTTCAGAGACTTGTCTCAATGACTTAGT 12364 36 100.0 30 .................................... TTGTCTAATCAGTTCTTGTCGCTTTTCTTC 12298 36 100.0 30 .................................... TTAATTCTGCAACATTCGCCGGACAAGTTG 12232 36 100.0 30 .................................... TGTTGTCAATGCTATCAATACTAGCATAGA 12166 36 100.0 30 .................................... GGGTGCTTGAATAGAGATAGCGGAAAGTGA 12100 36 100.0 30 .................................... TCATCCTCCATACCATTTTGTAATTGGTAT 12034 36 100.0 30 .................................... TTCAATGATCGCGCTGATGTTGTTCTTTTT 11968 36 100.0 30 .................................... TTGAACAAAACCATTTGCGAGATCATAAGC 11902 36 100.0 30 .................................... ACTCAAATCCAATTTTGAATCGAACACGTA 11836 36 100.0 30 .................................... GTCATATGTACCTATTCAATTGTTATTTTA 11770 36 100.0 30 .................................... TCAATTAAATGATTAAAAGCACGCGCTTCA 11704 36 100.0 30 .................................... TTTATGTTACAAAGATTACTAGAATTGCCA 11638 36 100.0 30 .................................... CTCGGATCATGTCCGCCAGGGAAGCGTTAC 11572 36 100.0 30 .................................... TTTAAGTTTAACTCTACTTTATAAGTACCA 11506 36 100.0 30 .................................... AATGAATTAAGCGACATGAGCGATAACAAT 11440 36 100.0 30 .................................... GCTGTAACCCTTGCAGATCAAGGGGCCTAG 11374 36 100.0 30 .................................... TTAATTCTGCAACATTCGCCGGACAAACTG 11308 36 100.0 30 .................................... CAGGAGTTGATACTCTGACTATTGAAATTC 11242 36 97.2 30 ...................G................ CGAAACAAGGCCGTGCGTATGAATTGTTAT 11176 36 100.0 30 .................................... CAAGCCCTTAACACGCTCGATGTCTAATGC 11110 36 100.0 30 .................................... CTCAGAATCACCGTCGTAACAGCTAATTTC 11044 36 100.0 30 .................................... ATTGGCGTCATTGATTTTAGCAAGTCCGCC 10978 36 100.0 30 .................................... TCCAAAAATCCGCTTCACGACATTCGAGAA 10912 36 100.0 30 .................................... GTTTTCAAACAATATAGGAATCATTAACCT 10846 36 100.0 30 .................................... GTATGCGAATTAATTTGTCGCTGGTTCTTA 10780 36 100.0 30 .................................... TTGCTTCTGATTCAAATTCTAAATATCACA 10714 36 88.9 30 .......................CG....T..G... TATTTACATTACTCGCCGCCTTTTAACGCT 10648 36 83.3 28 ......A......T.T............A.T....A AGGATTGTATAAATCCAGACATGTTATC G [10614] 10583 35 75.0 0 .CA.C......G.-.A.C.........C.A...... - Deletion [10549] 10548 35 75.0 0 A.....T................CC...-..ATTA. | ========== ====== ====== ====== ==================================== ============================== ================== 43 36 98.1 29 GTTTTAGATTTAAGTCATCTCAATTACTTCAGAACC # Left flank : TCTACAAACTTACAGCATAAATTCTATGCCAAATTTAAAACTTGTTTATAAAAAGATTGCACAAAGTTCAAACGTCGAATTTAAAGACGCTTTTGAAAAAATAAACGTGGAGTTGAACGAATTAGTATTTGATGCTGGTTGTTCATTTGATGGGCCTTTTGATTACGACAGTCTATCAACCTTCGAAAGCATATTAAAATTCAAATCATTGAAATTTGATAGTGGAAACTGGCAAAACTACTATGATAAGATGTTAGCAGTAATCAATTTCTACAAAGACTTTTCAGAAAAAAGGTTATTAATTCTACATGATTTACACAAATTACTAAATCTAAATCAGGTAAATGAAATGAATGACTATTTAAGATCTCTCAAATTAACTCTTATAAGTTTCGAATCTTATGAAATGATATCTCGTACAGAAAATCTTAATTGCAAGGTTTATTCAATCGATGATGATCATATGAGATTCGATTATTAGAAAGATTTAACTTGGGACG # Right flank : TCAATTTCAGCAAAAAGGATCCGCCCCAAAACAGGCGAATCCTTTTTAAAATTCTAAACGTTTAGTCCACCAATCGATCTGGCATCTTACCTTCCAAGAAGCTCCAAGTACCGTTAGATATCATCAAGACATCTTGATCAACTCGTGACAAAGTCTTATTGATCAAATCTTCATGACCTGTCATCATTTTTTCTGTCCAATGTGGATCGAGCAACAATGAACGTCCAACCCCAACTAAATCGGTATTTTCCAATATTTCTTCAGCATCAGCTTTTGTTCTGACATCCCCAATTCCAATAATTGGCATACGTCCGGCAACTTGCTCCTTAATATAAGAAAGAATTGGCTTATCTTTGTAATCATCACTTACTGAAACTCGCTTATAGTCGCCCATTGAAATGTGTAGATAATCTAATGGCTTGTCTGCCAATTTATCGACTAAATACATTGTGTCTGACATACGAATCCCAGGATTTTCATATTCCTCTGGTGACAATCGG # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATTTAAGTCATCTCAATTACTTCAGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [30-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //