Array 1 284497-286804 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXCM01000030.1 Moraxella catarrhalis strain 5157102Y 5157102Y_NODE_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 284497 28 100.0 32 ............................ GTCGTTGGACGCTTGCCCACCCCAAAATACAT 284557 28 100.0 32 ............................ TACTATACCTGATTCTTATTCTGTGAATTATG 284617 28 100.0 32 ............................ ATCAATGAGCCAAAGAAAATCAACATCGCTGA 284677 28 100.0 33 ............................ AAGTGATGGCGAAAACTGGACAATCATTGATGT 284738 28 100.0 32 ............................ ATCTCCGCCCATGGTGATGACCTCACTTTTTT 284798 28 100.0 32 ............................ ATTGGGCAGTAAGATACCACAGATAACATAAG 284858 28 100.0 33 ............................ ATGCGAATAAGCGGCGATAAGTCAGCTTCGCAC 284919 28 100.0 32 ............................ TAAACCCAATACGAAAAGATGCCAAATTTTAT 284979 28 100.0 32 ............................ GCCTGCATAGCTTAGGCGAGCTAGTGTACGGT 285039 28 100.0 32 ............................ TAATTGCTCCCCTAAGATTACCGAACAACGAA 285099 28 100.0 32 ............................ GTAAAAAGTCGGTAGGTAGGGCGAGTGGTGAC 285159 28 100.0 32 ............................ AGTTAAAAAAATAAGCAGTTTTAAGACTTGCT 285219 28 100.0 32 ............................ TATATAGCGATACAGCAGATTTTATTGCGATT 285279 28 100.0 32 ............................ AAAACCTTGACACGGTCAGGATTTAGCACATA 285339 28 100.0 32 ............................ AAGTTTTCAGCGATTGAGCCGAATGTCCGCCG 285399 28 100.0 32 ............................ TTTAGATGATGATGACTTTGTCAAAGAAGTGC 285459 28 100.0 32 ............................ AAGATGGTAAGATTATTAGTCTAACCAATCAA 285519 28 100.0 32 ............................ AGAATACAACTGCTTAGTGTATTACCCAAGCT 285579 28 100.0 32 ............................ AAAAGGCGGCCAATACTTTGATGCAGGAAACA 285639 28 100.0 32 ............................ AGGTGGGAAACAAAACAGGGCTTTGTGCAGTA 285699 28 100.0 32 ............................ ATATGGATATAAAGATAAGTATTCTGATAAGT 285759 28 100.0 32 ............................ AAGCAAGACAAAACATTTGCTTTAGGTGAGTT 285819 28 100.0 33 ............................ GGCTTTTTAAAGAATTAAACCGTTGGACGATCA 285880 28 100.0 32 ............................ AGGTGGGAAACAAAACAGGGCTTTGTGCAGTA 285940 28 100.0 32 ............................ ATATGGATATAAAGATAAGTATTCTGATAAGT 286000 28 100.0 27 ............................ GAAGATCAGATCTATTATTGAGCGAGC 286055 28 100.0 32 ............................ AAACTTCGGTCGATTTTGACACGGTTGAACGC 286115 28 100.0 32 ............................ GTGATGATGTTGAAAAATATGGCAAGTTATTT 286175 28 100.0 32 ............................ TTATGACACGCTTGGCACTGATTTTAGTGATA 286235 28 100.0 34 ............................ CTGCGAAACTCGGTCATTCGCAAGTTTTGCAAAC 286297 28 100.0 32 ............................ AAACTGCCAGAGGTGTGCACTGGCAAGCCTTT 286357 28 100.0 32 ............................ ATGACGATGCTAACAGAAGAACAAGCAGATTT 286417 28 100.0 32 ............................ TCCAAAAACTCACACAGATAAAACGTGATTAA 286477 28 100.0 32 ............................ TTAGCAAGTCTTAAAACTGCTTATTTTTTTAA 286537 28 100.0 32 ............................ AACTGCTTATGGCTGGATTATACCAGTACCAC 286597 28 100.0 32 ............................ ACTTGATTTAGTAGCTAAGCTTGATGTGTCAA 286657 28 100.0 32 ............................ GCCCTCAAAACTGGTTTGCAGTAGCTGATGTG 286717 28 100.0 32 ............................ CCGGTTTGGGATTGCGAAAATGGATAGATGTT 286777 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 39 28 100.0 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTACAGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGCGCCAATGCCGAAAGCTATAATGCCCAACGCCGCATGGAACAAGAAACCGATAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAATCTAGAGCGCGCCATTAAAGATACTGAAGAGACAGGTACAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCATCCTTGAGAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //