Array 1 276995-278020 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ALUC01000029.1 Streptococcus agalactiae GB00874 ctg7180000005448, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    276995	    36	 100.0	    30	....................................	AAAAAATAAATGACTTTAAAGCACTTGGAG	
    277061	    36	 100.0	    30	....................................	TAGTAGCCATTATTATTATGGCTTTTATTT	
    277127	    36	 100.0	    30	....................................	GGATGATTTCGATTATGCGGCGGTGGTTGA	
    277193	    36	 100.0	    30	....................................	AAATGTTAATTTCATATCTACATCTTGTTC	
    277259	    36	 100.0	    30	....................................	ACATAACGTTCAAAAGTTTCCACTAATAGC	
    277325	    36	 100.0	    30	....................................	TCAAACAACATTGGTGATCTTATTGCGGTA	
    277391	    36	 100.0	    30	....................................	TTATTTAAGACGTGATTTAATGTTAAAACT	
    277457	    36	 100.0	    30	....................................	CAAACTATCTTGATTATAAGTGGACTGATA	
    277523	    36	 100.0	    30	....................................	ATTTTTACACGAGTGCTAGAAAACGGGGCA	
    277589	    36	 100.0	    30	....................................	ACATTTGTTAAATTTGAACTTACTGGAAAT	
    277655	    36	 100.0	    30	....................................	TCCAAAACAAATACGAATGCTTGAGCGATA	
    277721	    36	 100.0	    30	....................................	GATTACCTTAGATGATGTTCTAATCGGTAA	
    277787	    36	 100.0	    30	....................................	TCAAACAACATTGGTGATCTTATTGCGGTA	
    277853	    36	 100.0	    30	....................................	TTATTTAAGACGTGATTTAATGTTAAAACT	
    277919	    36	 100.0	    30	....................................	TACTTGACGAATTGAAGATGACGGAATTTA	
    277985	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCATAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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