Array 1 504-7 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAEI01000122.1 Campylobacter coli strain MON324 1010600122, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 503 36 100.0 30 .................................... ATGGACACATTAAACAAGGAAAAGATTTTT 437 36 100.0 30 .................................... TCCAGTTAGTAGACTTGCTCCGATGAATCA 371 36 100.0 30 .................................... AAAAGCAATGAAAATAATCTCACTAAGCTT 305 36 100.0 29 .................................... AGCTCATCGGTTGCACCAGAATAAACAGG 240 36 97.2 30 ............................A....... AAAGATATAGCTATTAAGCAAGAGCCTAAG 174 36 100.0 30 .................................... AGACTTAAGTAAGGCTATTCTAATCAAAGA 108 36 100.0 30 .................................... TCAAAATTAAGAGAACATGGAGTATTAATG 42 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.7 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Left flank : | # Right flank : TAGACTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [6.7-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //