Array 1 1639-3432 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLO01000023.1 Mycolicibacterium mucogenicum strain 24AIII NODE_23_length_79531_cov_104.106376, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1639 37 100.0 36 ..................................... GGCAGCCACAGCATCTGATGCCAAGCTTGGCGTCCA 1712 37 100.0 36 ..................................... GTGTTGAACATGTGCCACGCCGCCTCAATCAGGTTG 1785 37 100.0 35 ..................................... GCCGACCACGTGGTTGCGAAGTCGTCGTTCATAGG 1857 37 100.0 37 ..................................... TTCAACTGCGAGCAGCAGAACACGGGCACGACCGACC 1931 37 100.0 38 ..................................... AACGACCACGCCCGCCTCGTCGCGGCCTGGCCGTGCCA 2006 37 100.0 38 ..................................... TCATCAGCCGGTCGCCCGTCGCTAAGCGGTTCAAGCGT 2081 37 100.0 36 ..................................... ACGTACAACCTGCCGCCCGGCCAGATGGAATTCTAT 2154 37 100.0 38 ..................................... GCCCAATGTGCCGCTGCCCCACCACAACTGATGCACTG 2229 37 100.0 36 ..................................... GAACCACTCCCAGTCGGTGCGCGTCAGGGCAGCTTT 2302 37 100.0 37 ..................................... AGCGCTGCTGATTGGGGTCTGTACGGTTCCCCAGGTT 2376 37 100.0 40 ..................................... GTGGAAGACCGGTGACGGCACAACGCATTACAACGACCTG 2453 37 100.0 36 ..................................... ACACGACACGCTGGTCATCGCGTTTCATGCATGGTT 2526 37 100.0 36 ..................................... ATGTCCGATGACACAGACTCCCGGCACATGCCGCTG 2599 37 100.0 35 ..................................... TTCGAAATCGACGCCGTCACCGGCGCGATCACCAA 2671 37 100.0 40 ..................................... GGGTTCGAGGCACTGCGGAAACACTAGCGCCGCCGCGTGC 2748 37 100.0 35 ..................................... ACGTACAGGTGCGTGCCGATCACCCAGGCACGGCC 2820 37 100.0 34 ..................................... GATCCGGAGTCTGACGGACCCTACGAGACGAGTA 2891 37 100.0 38 ..................................... ATGTCCATCCTCGGCCTAGTGTCCGACGATGACGACGA 2966 37 100.0 36 ..................................... TCGTAAGCCGCCAGCACGAGGCCGACGGCGGCGTTG 3039 37 100.0 35 ..................................... GAATCGCCGTCGATGACAACCAGACGGTTGGGTGT 3111 33 89.2 35 .......................----.......... GTCGTGACCAGACCGTGGCGATTGCCGTTCGCCAC 3179 37 100.0 36 ..................................... GACCGGCGCGACCAGGTAGGCCCGTACCACCCGGCG 3252 37 100.0 35 ..................................... AGGTATAGACGGTCAGGACGGCCGAACGGTTCCAT 3324 37 100.0 35 ..................................... TTCATGCGGCCGTCCAGCAACACGACGTAGTACAG 3396 37 97.3 0 A.................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 25 37 99.5 36 GCCACCACGGCTTTACGGCCGTGGCCTTCGTTGAGGG # Left flank : CCGTACTCGGAAAGCACAGCGCACATCGACTCGACACCCCACTTGAGACCATCAACGCCCACCCGCATGTGCTGGTGGGCGCTGATGAACTCCACGACTACTGAGAGGGCCGGTCGAGCTCGGCGGCGAAGAAAACCGAGGCCGCCTTCAAGATCGCGTTGGCCCGCTTGAGTTCGGCATTCTCCCGGCGCAGCTTGCGCAGGACCTCGGATTCCTCGCTGGTCTGCCCCGCCCGAGAGCCGGCGTCGATCTCAGCCTGGCGGACCCATTTGCGCACCGTTTCGGCAGTACCGACGCCCAGCAGGTCAGCAACCCGGCCCATCGCCTCCCACTCCGAAACTGTCTCGCTGCGCAGATCGGCCACCATCTGCACCGCCCGCACCTTCAGCTCGTCTGGATACCGCCTCGATGACTTCGATCCCACGTGCCCATCCTTCCCAACGGAAGAACTCTCCAGACACGCCGGGGCGGATCACCGACCGAGCCCTTGCCTGCCTGGT # Right flank : GGATCCGGAGTCTGACGGACCCTACGAGACGAGTAGGGGTCTGCTGCACGATCAGGTGACAGTTTCGGTCACGCGGCCTGACTGGCCGGTGTGGTCATGATTGCTTCGAATTCGATCGGGGTCAACCGCCCGAGGCCGGACTGGCGGCGGCGCCGGTGGTAGGTGCGCTCGATCCAGGTGACGATCGCGATGCGGAGTTGTTCTCGGGTGTCCCAGCGGCGGCGGTCGAGCACGTTCTTCTGCAGCAGGCTAAAGAAGCTCTCCATGGCGGCGTTGTCGCCGGCGGCTCCGACACGGCCCATAGAGCCGACCATCTCGTGTTGATTCAAGGCGTGTACGAATTTCCTTGACCGGAACTGAGATCCGCGATCCGAGTGCAGAATGCACCCCGCGACATCTCCGCGTCGGGCTACCGCGCTGTGTAGTGCCCGGATGGCCAGTTGTGACTTCATTCGGGAGTCGATGCTGTAGCCGACGATCCGGTTGGAGAACACGTCCTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCACCACGGCTTTACGGCCGTGGCCTTCGTTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.40,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 10181-10577 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLO01000023.1 Mycolicibacterium mucogenicum strain 24AIII NODE_23_length_79531_cov_104.106376, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 10181 35 100.0 37 ................................... GGCAGAAGGTCACCGCCACGGCGACCACGCCGACGGC 10253 35 100.0 37 ................................... GGAGCGAATCGGCATACCGGTACCACGACGAGCACAA 10325 35 100.0 38 ................................... GGGCCAACTCGGCTGACTGGGCCGATGTGGAAGCTCAC 10398 35 100.0 38 ................................... GCTCATTGACGGCCGCAACCATCGCGTCCCAGTGTTCC 10471 35 97.1 37 .............................A..... CCGGACCACCGGGCAGTTTCCAGCGCCCGTCGAACTT 10543 35 85.7 0 ...G.........CTT.............A..... | ========== ====== ====== ====== =================================== ====================================== ================== 6 35 97.1 38 GCCACCACGGCTTTACGGCCGTGGCCTTCGTTGAG # Left flank : CGATGCGCCGGTGATCGGATCGATCGCCGACAGATGCGGCACCTGGTGGCGCGCGAGAATCCGTCCGATCGTCGACGGATTCATGTTCAGTTCGGCGGCCAGGACCACCGCACCGCGTTTGCGGCGGGCCCGGGCGGCCAGCACCTTCTTTTCGACCCGGGCGCTGGTGCGCTGAGGCATGTGATGCGGGCGTGATGATCGGTCGGCCAACGCCGCCTCACCCCCTTCGGCATATCGGCGCAGCCACTTGTACACCGTTGACCGGGAAATGCCGAGTTGCTCAGCCACATGCGCGGGTGGCCACCCCGCGGCGACACGCTCAACGATCAGGCGACGAGCGAACAGATTGGTACGGGCGTTAGCGTGAGACACGAGGACCTCCTACGGGTGAATGCCAGACACATCCACTCCGTCAGGAGGTCCTCCCCATTTCAAGCAGGCACGCCGTCAACAACCTCCCGGGTCACGACAGCTAGCCGGCTAGTAGTGAGGGGTTGCGG # Right flank : GGATGGCCGTTGAACCGGGACGGGCTCTTGACCCGCTCCCGCAGCAATTCGGTGGAGTACGAGCCTTGGCGCAGCTTGGAAATCGCCACTTTGATCGTGCCGGCCCAGAGGGTCAAATCGCGGTGCCGGCAGCCGTCAGGCATTCGTACAGTCCGGACTGGGCCGGCCGTGCTCGCCGCATACCGCATCCGCATCAGCGGACAGCAGTTGAGCACCGTGCCCAACAAGTCCGGCGGCCCGTCAGCCAGTCCCGTGCTCCAACAACGCAACGCGGATCACGGTACGGGGAGCGGTCATCGTGGTAGTTCCTCTCGAAACTGCTGTGAAGGATTCACTCGAAGCGTCACGGGGTGGCGGCACTCACGTCCCCAGCGGTGCACCAGGCAACGATCACGCAATCAGCGCTTCAACCATTATCAGGGATACAACTCACAGTGTCGTGGCCTTCTGAGCCATCCCCGCGACGCCGGTCAGAGCTTCACGCACGTCCCCCGTGGCTT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCACCACGGCTTTACGGCCGTGGCCTTCGTTGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.40,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //