Array 1 85863-90144 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQK01000001.1 Capnocytophaga canis strain 13235B-2 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 85863 47 100.0 30 ............................................... TTTATTTTCAAATATTTTTGATACTGGATA 85940 47 100.0 30 ............................................... TACTTACGTAAGTGATACAAACCATCAACG 86017 47 100.0 30 ............................................... GTACGACACGGTGGCTGAAACTCGTTTGCA 86094 47 100.0 30 ............................................... TAGAAATTGCGTGTATGTCGGTACTGTTAG 86171 47 100.0 30 ............................................... TATTTTATAGAAATTTAATTGTTTATGTTA 86248 47 100.0 30 ............................................... TATACAGAGATGGAATATTTTCAGGACTTA 86325 47 100.0 30 ............................................... CCGAACGCCAACGACTTGAAAACGCAAGGA 86402 47 100.0 30 ............................................... CACACACATCTCTAAAAGTAGAAGTTGTGA 86479 47 100.0 30 ............................................... TTAGAATTAATTTTTGGAGATAATAATTTG 86556 47 100.0 30 ............................................... TACACCCTTGTCCATCAATTGTTCTAAAAT 86633 47 100.0 30 ............................................... TTACATTTGATTCATACCCTTTCTCCCTAA 86710 47 100.0 30 ............................................... ATTATCATCTTTTTGGTTAGTTACTGTCAT 86787 47 100.0 30 ............................................... AAGATCCTTTAAATGTGTTTTTAATCTTTT 86864 47 100.0 30 ............................................... AGGTTTGCTCGTGAAAGTTCAGTATATTCT 86941 47 100.0 30 ............................................... TACTTCATCTCACAAAAATTACTTCGCAAA 87018 47 100.0 30 ............................................... TATGACGAAAATGCAGACGAAATAGATGCG 87095 47 100.0 30 ............................................... AGTCTTTTTCTTGAAAGAAAACTTTTCCTG 87172 47 100.0 30 ............................................... TTACTTGAAATGGTGCTGTGGCTCATTGCT 87249 47 100.0 30 ............................................... TAATAAAAATATATAAACAACGTAAGCAAT 87326 47 100.0 30 ............................................... TCGATGAGTTAAACATTATTCATAAAAAAG 87403 47 100.0 30 ............................................... ACGAGCCGTATTTAGGCGTCCTCCTGAGTT 87480 47 100.0 30 ............................................... TTGAAAATAATGATAATATAAAATTGTTTA 87557 47 100.0 30 ............................................... GCGGGCGGGGTGTAAAATAAAAGTCAAGTT 87634 47 100.0 30 ............................................... GAACTCTATTACATCTCCTATTTTATACAT 87711 47 100.0 30 ............................................... GAATGCAATAACACATACACTGCGGATGCC 87788 47 100.0 30 ............................................... AGTGTAGGATTTTCATCGTTTTCTATTTCG 87865 47 100.0 30 ............................................... TCGTGTGCTTGCCGTTCATTAATGGTATGC 87942 47 100.0 30 ............................................... TTTAGGTTTATCGAAATCTTGAGTTTCAGG 88019 47 100.0 30 ............................................... TGAATTTGTCAACATTAATGAATTTGTAGA 88096 47 100.0 30 ............................................... AGATATATAATCGTCAAAAGCAGCACACCA 88173 47 100.0 30 ............................................... AATAAAGTGAACCATTTTAGTGGATAAAAA 88250 47 100.0 30 ............................................... TTGATTTCATTGGTTATTTATTTTCAATCT 88327 47 100.0 30 ............................................... AACTGATAATTCCATAACATATTGTTTTCT 88404 47 100.0 30 ............................................... TCGGGAAGTACCATAACATTCTGATTTTAA 88481 47 100.0 30 ............................................... CAGTGCCTGTTTTGGTCTCGTGCTTGTATA 88558 47 100.0 30 ............................................... TCCACCAAAAGGCGTAAATACTCATGCGGT 88635 47 100.0 30 ............................................... TTGGCACAGCCCCTCTAACTCGTGAGGCTA 88712 47 100.0 30 ............................................... CCTGCCCGTAATTTCGCTGATAGCCGTCAG 88789 47 100.0 30 ............................................... TGGATTATCTACATATTACAGCAATGTTTG 88866 47 100.0 30 ............................................... GTACCAAAAGGTGATAAATCACTTAAACAT 88943 47 100.0 30 ............................................... TGAAAGAAAGAATACTTAAAATATTAGAAT 89020 47 100.0 30 ............................................... TAGGGACTTTTTGTTTATTTTAATATATAT 89097 47 100.0 30 ............................................... GGGGCATCTCGCGGATGGTTGAGGAGGACG 89174 47 100.0 30 ............................................... GAGAAAATAAAAACACTATAACCCCGCAAG 89251 47 100.0 30 ............................................... TTAGAATATTTACTTAAATCGTCTAGCGTA 89328 47 100.0 30 ............................................... ACACTGAATTAGATTTGATTTATCAAGATG 89405 47 100.0 30 ............................................... TATACAGACTAAAGCAATATTACATTCACA 89482 47 100.0 30 ............................................... TATGACCCCTGTCGTCAATGTACATATCAT 89559 47 100.0 30 ............................................... TTGCTGAACAGAAGGTAAACGGGTTGCAGA 89636 47 100.0 30 ............................................... ACAACCGAAATTAGCAATTTAATATGAAAA 89713 47 100.0 30 ............................................... TCCAAATCAATTTCAAATTCTTCGTATAAT 89790 47 100.0 30 ............................................... CGAGTTATTGAAGTAAACACCAAAAGATAT 89867 47 100.0 30 ............................................... TGTTCGATAATCTACACACAATAAGAGGTT 89944 47 100.0 30 ............................................... GGGTTTAGATAATCTTCATTGAATCGAGAG 90021 47 100.0 30 ............................................... TTTCCGATGATAAACGTCTCAGTTGGTAAA 90098 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 56 47 100.0 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAAC # Left flank : ACAAATGCTATACGGGCGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAACGCTTATAGAATTATGTGGGTAATGGTTTTATACGATTTGCCAACCGAGACCAAGGCAATGCAAAAAGCAGCCAATCTCTTCCGAAAACGCTTGGAAGATGATGGATTTTCTTTATTTCAGTTTTCTATCTATTTGAGGCACTGTCCGAGTAGAGAAAATGCAGAAGTGCATAAAAAACGAGTAAAAATGATGCTTCCCAAATACGGGAAAGTAGCCGTAATGACGATTACAGATAAGCAGTTTGGTGATATGGAAATATTCCATTCTAAAGTACGCGAAGATCCGCCACCTACTTACCAGCAGCTCGAGTTATTTTAGAAATAGAATGAAAAAAATGGATTTACTCAGCTCGATTTATTCTTTTTTTGCTCAATTTTTTATTTCTAAAAACAAAAATAATCCTCTGACAGACAGAGGATTATTTTTTGAG # Right flank : CTTTTTAGGTACATTACCATTTAATGAATAAGTTGTAACTAATCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAAAGCAATTTGCAACATTTTAATCACACGAGAGTTATTACGAAAGGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACAGGTTGATAGATTTGTTCGAGAAGCACAATGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACATTGGGGAGGAGGAGCAATATGTAGTGGATGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACACGATATAAAGCTGAAACATAGATAACGAAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACCCGTGCAGGTAATAAACCAGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 2 90344-90929 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQK01000001.1 Capnocytophaga canis strain 13235B-2 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 90344 47 100.0 30 ............................................... AGGTTGATAGATTTGTTCGAGAAGCACAAT 90421 47 100.0 30 ............................................... ATTGGGGAGGAGGAGCAATATGTAGTGGAT 90498 47 100.0 30 ............................................... ACGATATAAAGCTGAAACATAGATAACGAA 90575 47 100.0 30 ............................................... CCGTGCAGGTAATAAACCAGCTAAGAACGA 90652 47 100.0 30 ............................................... ACGGCTCCTACCGACGGATTTCTGAAAGCA 90729 47 100.0 30 ............................................... AAAAACTAATGATTTTGATGATTTTGACAG 90806 47 100.0 30 ............................................... TCCCTTATCATTCATAACTACATTCATATC 90883 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 100.0 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAAC # Left flank : TTGAAGTAAACACCAAAAGATATGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACTGTTCGATAATCTACACACAATAAGAGGTTGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACGGGTTTAGATAATCTTCATTGAATCGAGAGGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACTTTCCGATGATAAACGTCTCAGTTGGTAAAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACTTTTTAGGTACATTACCATTTAATGAATAAGTTGTAACTAATCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAAAGCAATTTGCAACATTTTAATCACACGAGAGTTATTACGAAAG # Right flank : CGAACGATGAATATATAAAACAAATAGCGCAGTTGTAACTAATCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAAGCAATTTGCAACACGCGACAAATACGAACTGAGATTGCTAAAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACTCTTAAATCCTCATTGCTTAATTGGGCTTGGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACCGAGTCCGCTTTGGCAACTTCATCACTATAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACTTTCAAAACATCAATAATATTTTTCAAATTGTTGTAACTAATCACAAAGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 3 91177-91685 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQK01000001.1 Capnocytophaga canis strain 13235B-2 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 91177 47 100.0 30 ............................................... TCTTAAATCCTCATTGCTTAATTGGGCTTG 91254 47 100.0 30 ............................................... CGAGTCCGCTTTGGCAACTTCATCACTATA 91331 47 100.0 30 ............................................... TTTCAAAACATCAATAATATTTTTCAAATT 91408 47 100.0 30 ............................................... AAACCCTCTTGCGAATGATTTACACATTAA 91485 47 100.0 30 ............................................... AGAAATCGGCATCGAAATTCAACATATTTT 91562 47 100.0 30 ............................................... GCTTGTTTATTTATATTCAAACCTAATGCA 91639 47 93.6 0 .........C..............A...T.................. | ========== ====== ====== ====== =============================================== ============================== ================== 7 47 99.1 30 GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAAC # Left flank : AAAATTGAAAGCAATTTGCAACACGGCTCCTACCGACGGATTTCTGAAAGCAGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACAAAAACTAATGATTTTGATGATTTTGACAGGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACTCCCTTATCATTCATAACTACATTCATATCGTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAACGAACGATGAATATATAAAACAAATAGCGCAGTTGTAACTAATCACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAAGCAATTTGCAACACGCGACAAATACGAACTGAGATTGCTAAA # Right flank : CGATTTCTCGCATGTTATCCATGTTGATATTGTTGTAACTAATCACAAAGTTACAGACGATTTAATATCCCGCTCTTTGTACGACTTCAAATAATGAAGGTTTAAAGTATCCATTACAAAAGATTTCAAGCAGTAAATTATGTCCTCGTCCTTTTTCTGACGTAAGATGTCGAGAAAGATGATAAAAACCATCCTCTTGCTTTTCGTATTTGATTTTTTTTAGCCAAAATCCTGAACGTGTTATGTATAGCCAATCTTGAAATTGGAAAGGTGCATAGCGACAGTCCCAATCAGGAGGATAACCTTGAAGTAATGTTCTGTACTCTATGCTGGAAAGACGAAAGTCGATGCATTCTTCTGCTTCCCAATGCACACTATCGGGATTTGGGTATTCGACTCCGTAGATGATTATATTATCTTGCTTATTCATTTTATAAAGAATTAAGGTTTTTATTTTCAACGTGTTAACTTTCGTGTTTTGGAATTTAGAACTAAGGTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGGAAAATTGAAAGCAATTTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //