Array 1 6026-2991 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSLJ01000008.1 Tannerella forsythia strain WW11663 NODE_8_length_118066_cov_11.2212_ID_21139, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 6025 30 100.0 41 .............................. ACTACAAGCTCAAAGACAGCGATGCAGAAATACTCATTTGT 5954 30 100.0 36 .............................. ATCACTCCTTTTTGACGTTGCTCTAATTCTAACTTT 5888 30 100.0 36 .............................. TATATGCCTTTTATGGGCCTCTGTGGATCGTGTTTT 5822 30 100.0 36 .............................. GGTCTAAAAGGGTGTTGTTTTTCAGAAATGCAGACA 5756 30 100.0 34 .............................. TTTTTATGTTCAACTACCAGCTGCCTAAATAAGA 5692 30 100.0 36 .............................. TCGCAATTCCCTCTTCCACGGTGTCCCTATACCCGT 5626 30 100.0 38 .............................. TAAGGTTTTTCATGCCCTTTAGCATGATGAAAAACGAT 5558 30 100.0 37 .............................. ACGATACGTTACTGGTTGATGAAAAATGCACTTCCTT 5491 30 100.0 37 .............................. ATCTCTTCTCATTAGAAATTAATATAGCCCGGCAGTA 5424 30 100.0 35 .............................. TCGGGCTATCCGCACTCACTCTTTTTCCCTAAAAA 5359 30 100.0 37 .............................. AAAGATTATACTAAAATATACTATCTCTGATTTCGCT 5292 30 100.0 37 .............................. TAATTTATTCAGTTCGAAAGTATCTTTATTCTTATTA 5225 30 100.0 36 .............................. TTCTTTGAAGAAACTACAATATTTATCTTTATGACA 5159 30 100.0 36 .............................. ATCAAAACGAATATTTCGGGCGTTATCGGAGCGCCG 5093 30 100.0 39 .............................. TTGATAAGATAACGTCTTCATTGTATCTTCCTCTCCATG 5024 30 100.0 37 .............................. TCGAACGATCGTGTTGTTTTCGATGTTCGAGGACGTT 4957 30 100.0 39 .............................. ATTCAAAATCATATACAAACACATACGGATTGCTATCCC 4888 30 100.0 35 .............................. TGCTTGATTTGTGCAAGTGCCTGGTTGTATGTTTT 4823 30 100.0 37 .............................. CCGCGACGAGCTAATATTTCTCGGACGAGCGGATGAA 4756 30 100.0 37 .............................. GTACGCATGCGCATCGAGTTGCCACAAGCCTACACTG 4689 30 100.0 36 .............................. TCATTATTTTTTGTTTATCAAATTGCCCGTCAAGCC 4623 30 100.0 36 .............................. GTAATCCTTACACTGCCGATTATTGCGCTATGTATC 4557 30 100.0 37 .............................. TATATTCTAACAACCTCGGCTATTGCATTCTGCAACG 4490 30 100.0 34 .............................. TTCGATTGGCCGGTCGAACGCTTTAAGGAAATGC 4426 30 100.0 38 .............................. GTACTGTCCAGAATACTCTGCTCGTATCATTGCTGGAC 4358 30 100.0 35 .............................. CACAAATAGACTTCCGTTGCGTTCGCCGTTAGAGC 4293 30 100.0 36 .............................. CGAAGTGCCCACTCGCATATATCGCGCTGGTGCGGA 4227 30 100.0 40 .............................. TGATTGTACTTTTTTTGAATTAATAATGTTTATGTTTAGA 4157 30 100.0 38 .............................. TGTAGTATTTTGATGGTATTTTATCTGGTACAAAGAAG 4089 30 100.0 36 .............................. CGCTAAAGGTCGCTTGCGACATCCACATCGGCTCGG 4023 30 100.0 37 .............................. CAAGTCTTCTAAGCTCTTCGAGATAGGTGTCATCTGA 3956 30 100.0 37 .............................. TGCATTGCGGGCACGCGTGCGCGGTGTCGTAGTACTG 3889 30 100.0 38 .............................. TAGATGATTTTTCGTATCTGTTTCATATATCTTGTTTT 3821 30 100.0 36 .............................. GAACAGAGAGGCCACCAGGGCCGTTTTTAATTGCTT 3755 30 100.0 37 .............................. ACAAAGAATGTAGAGGAGTTTAAGATGATTGAAACCT 3688 30 100.0 38 .............................. GTTATGACACGATACATTTCAATACCCTCTTCGAAGGT 3620 30 100.0 35 .............................. TTATTTCCTCCGCTCTTTTATCGAAGTAGTATTCG 3555 30 100.0 36 .............................. CACGCACGTCGTCGAAGGTGAATACGACGTCGTGCT 3489 30 100.0 37 .............................. GAAGGGAAGTTATTTATCATGTCTGATTTTGTAAATG 3422 30 100.0 35 .............................. TTATTTCCTCCGCTCTTTTATCGAAGTAGTATTCG 3357 30 100.0 40 .............................. TCTGAACGCAAGTTGTTTATCACCTCCTTTGCCCCTTCGC 3287 30 100.0 37 .............................. TTCGACGGACAGACATACACGGCGCAGGCGCACACTG 3220 30 100.0 36 .............................. ACAGCGATAATCGTCTGGTCAATCGCGAACAGCGAA 3154 30 100.0 38 .............................. GTACACAAGAAGCCGGATAAGCCATTCTATCAGATACC 3086 30 100.0 36 .............................. CAAAATCGTCTTGATTCGCGTAACGAGGCAGAAGAT 3020 30 93.3 0 .........T...................T | ========== ====== ====== ====== ============================== ========================================= ================== 46 30 99.9 37 CTTTTAATCGGACTATCATAGAATTGAAAC # Left flank : TAAACCGTTTAAAATGTACTGGTAATGTATGTGATTCTGGTCTATGACTGCGGCGAGAAACGGGTTGGGAAAATGCTCAAGCTCTGTCGGAAATATCTGAATTGGATACAAAATTCGGTTTTTGAAGGCGAAATTACAGAAGTTAAATTAAAAGAGTTAACTTTGAAGGCTGAGAGAATAATGAACAGCGATGAAGACTCTCTGATTGTTTTTTCAAGTCGACAAGAAAAATGGTTGGATAAGCAAATCTTTGGTAAAGAGCGGAGTAGTATCGATAACTTCTTGTAATAAGTTGTCGGTGAGTATGAATTTCCATAATAGAAATCGAGGCATCGCTATTATGCGTTCTTTGACACATTGAAAATCAAAAGATAAAATTAGTTGTCGAAGTGCGGGGTTTTTCTTACCTTTGTGCTTCGACAACTTTGTTTGTTAATTTGTTGATATAATTGAAGGATAGATTATTGAGAATCAGTAATGTTTTTTGTCGTTTCGAACGG # Right flank : TGTCGTTTCAACTACTGAATGCAACTTTATGTTTCAAATTTAAGAAAAAGATTTCTTCTGGAGAATAGAAATTGAGTTTGTATTTTGGTCTTTCGTTGATTCTGTATTGCATCTGTTTGGTTATATTGTTACTAAATTCATTGCAATTTGATTTTTTAGGGATGTACTGCCTGATCAGTTTGTTTGTATTCTCAATCAATCCTTTTTCCCATGAAGAATAGGGATGAGTGAAATATATCTGTGTATGTAGCTTCTTGGCTAATGATTAATGATCTGCAAACTCGCTACCATTATCTACGGTGATGGAGTGTATATGCTCTTTTTGTATGGCAGCAGTATATCGTAAACGATTTTTGAATGCTCTTTTGCATTTTTCCCTTTGGGCAGTTTTTGCATCATGCAAAAAAACATAGTTCTTTCCACTAAGGTCAGGATATCCCCTTTACCGTTTTTTCCGACAATAGTGTCCATCTCCCAATTTCCAAAGCGTTGTTTGAGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGGACTATCATAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //