Array 1 277086-278045 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MAVY01000022.1 Streptococcus agalactiae strain AB-55 NODE_2_length_321821_cov_62.7935_ID_3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    277086	    36	 100.0	    30	....................................	TTTTGGAAATCCATATAATCAAATGATTTC	
    277152	    36	 100.0	    30	....................................	ACGATGTTTGTGAAAGACAAAATCTTCGCT	
    277218	    36	 100.0	    30	....................................	TAACTTTAATTCGATTATGTTTTGGTTATC	
    277284	    36	 100.0	    30	....................................	GTAAGTATTTTAAACGTGACTATTCCTGAA	
    277350	    36	 100.0	    30	....................................	TTTTTATTATGGAAAGTAATCATTATTTTT	
    277416	    36	 100.0	    30	....................................	TTCTTTAATACCTGAAATCATTGCGTTGTA	
    277482	    36	 100.0	    30	....................................	TTGTAATATTTGGTAACTCTTCTTTTGTTA	
    277548	    36	 100.0	    30	....................................	TCCGACCATGTCAGTCCAACGGTATTTTGT	
    277614	    36	 100.0	    30	....................................	TTCTTTAATACCTGAAATCATTGCGTTGTA	
    277680	    36	 100.0	    30	....................................	AGGGAGGAGAGAATCAATGCCGAATGCTGA	
    277746	    36	 100.0	    30	....................................	TGGCGAAAAATGGTATTATCTCAAAGGCAA	
    277812	    36	 100.0	    30	....................................	TTTTTACCAATGCTTCCATATCGCTTATAT	
    277878	    36	 100.0	    30	....................................	TACTTGACGAATTGAAGATGACGGAATTTA	
    277944	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT	
    278010	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//