Array 1 29493-23877 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDRQ01000002.1 Moraxella osloensis strain DE0456 NODE_2_length_332099_cov_79.395002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 29492 28 100.0 33 ............................ CAGTTGAAATAAAAAATTTAGCTTGGTCTGATT 29431 28 100.0 32 ............................ TTTATGCACTTAGCCGGTATTGATATAGCCAT 29371 28 100.0 32 ............................ AACTTCAAAAGCAGCTAATCTCATTACAAGAG 29311 28 100.0 32 ............................ TAAAAAATTTTGCTATAGCAAGCATGGCTACA 29251 28 100.0 32 ............................ CTAATTTTTACGCGTTTCTTGATGTTCAAAAC 29191 28 100.0 32 ............................ AATAACGCCTCAAGCTTGGCAACTCTTAGCTC 29131 28 100.0 32 ............................ TATGTGGCAACCCTAATTTTTCTTCTAAATTT 29071 28 100.0 32 ............................ TAGGGCAGCGCGTGGCGCGGTGCGTTGGGATG 29011 28 100.0 32 ............................ CTGGATAAACTTATAACTAGCATTTAAAGCAA 28951 28 100.0 32 ............................ TTAAATCATACATACGACAATTAACACCAGCT 28891 28 100.0 32 ............................ ATTGAAGGCAGCAACCCCATAAACTCTATTAT 28831 28 100.0 32 ............................ AAAAAGAAATTATCAACTATCTTTACACCTGA 28771 28 100.0 32 ............................ GGATATCAAAGGCGGTATCATTCAAGTATTTA 28711 28 100.0 32 ............................ TGCCAATTCAGCTATTTGCATAATTTCATAAG 28651 28 100.0 33 ............................ CTTTAAAATCGGCGATTATCAGGGATAGATAAA 28590 28 100.0 32 ............................ TTTTCCATGACCGTTAGCGGCAGTAACTAAAA 28530 28 100.0 32 ............................ ATCGCGGTTTATCTGTGCTTGGCGGTTTATCG 28470 28 100.0 32 ............................ TTTAACCCGTATTGATAAATCGTCACCGAAGG 28410 28 100.0 32 ............................ GCTAACATTTTGGTTGTCATCGTGATTGTCTT 28350 28 100.0 32 ............................ AAAACTGCCAAAATGGCACACATTCCACGTAT 28290 28 100.0 32 ............................ ATCATCTTTGCGGTAAACTTGAGGATAGATAG 28230 28 100.0 32 ............................ ATTCCGGAGTTTGGTTTGAAAAGTCAACATTG 28170 28 100.0 32 ............................ AAAACGACCTTTTTTAGTGCTGTAGGTGATAT 28110 28 100.0 32 ............................ AGTTAAGCCAGTTAATAAGCCATCAATCTAAT 28050 28 100.0 32 ............................ GCAAAGATGATGGTAAGGTTTATTGCTCTACT 27990 28 100.0 32 ............................ CTAATGTGTTAATGAAAGAATTGGTCTAAAAT 27930 28 100.0 32 ............................ TCAAAAATTGCGCCTAAGCGCGTAAAGGAGTT 27870 28 100.0 32 ............................ ATTTTCCATCTGTCGAAAAGTTTACTTTCAAC 27810 28 100.0 32 ............................ ACTTGTTATTGGGGTGGTCAAAATAGCCGTCT 27750 28 100.0 32 ............................ GTTAAATGCGTTTGAGATAGCACTTGCAAAGC 27690 28 100.0 32 ............................ GACCCCGACCACCTTGTCACCAACGCCAGTTA 27630 28 100.0 32 ............................ AGCCGATACAATGCCAAAAACTTAAATTCCTT 27570 28 100.0 32 ............................ TATTGGTAGTTTTCGTGATAATGCTGAATGTA 27510 28 100.0 32 ............................ AACAACACCAACAAAGCCAGAAATAGACACAT 27450 28 100.0 33 ............................ ATTATGCCACCTCCGCTAATTGGGCTTTAAAAC 27389 28 100.0 32 ............................ TTAAAGAAGGCAGAGGCTTGGATATCAACAAA 27329 28 100.0 32 ............................ AACAGGCGCCCAAACAACAACCGAGCAGCTCA 27269 28 100.0 32 ............................ CGTGTTGTTGGTTTTTGTACCACACCCCACCA 27209 28 100.0 32 ............................ CACCACTGAGGATAATATTGCTCAATATTAGC 27149 28 100.0 32 ............................ GTCAAGATTAAAGCCCGCGGTAGTAATGGCAA 27089 28 100.0 32 ............................ AAATTCATGGTCAATCGCTTGACCCTGTTTGT 27029 28 100.0 33 ............................ AGATAATACTTTGATTACAAGCGTCCGCTGCTG 26968 28 100.0 32 ............................ CAAGTCTGCGCGCTGACGACATCATCTATGAT 26908 28 100.0 32 ............................ ATAAGCGGCGACCGTAGTTATCACAGCGGCGA 26848 28 100.0 32 ............................ ATCCGCGCCGTCACAAGCAATGCGGTGATGAT 26788 28 100.0 32 ............................ TTTACGTCCACAAGCCGATATTTTTACCCAGC 26728 28 100.0 32 ............................ TCAAAGTCGACACTGGTCGGTGCCCAGCTACC 26668 28 100.0 32 ............................ CAACCCCCTACCGAACAAGCTAGACCGTGATT 26608 28 100.0 32 ............................ TTATTCACCAACAACGAACAAGGCTTTGCCTT 26548 28 100.0 32 ............................ TGTAATTTTATTGTAAATAAATAAAGTAATCA 26488 28 100.0 32 ............................ GTGATGAATCGTTTTATGATGGCGACCAATTT 26428 28 100.0 32 ............................ TTTAAGCTGTTTGGCTTCATCCCGCACAATCA 26368 28 100.0 32 ............................ AGCACGCGAAAGGCGTTTTTGCGAAATATCGC 26308 28 100.0 32 ............................ AACTGCTTTGCGTATCCCTGAAATGCTTGAAT 26248 28 100.0 32 ............................ TTTATTGTTGAATTCCTTGTTGACGCTCAACC 26188 28 100.0 32 ............................ TTGCTGATAAACACACCAACCAATGCGCCACT 26128 28 100.0 32 ............................ TACAATCTGACGGCTTAGAGCTGCGCGGTGAT 26068 28 100.0 32 ............................ AAAAAAGGCTTGGCTATATATAGATAGCGAAA 26008 28 100.0 32 ............................ AAGTCAATGAGCTGATAATCATCGTCAAAGCG 25948 28 100.0 32 ............................ GCCGCCGTCACGTTCTATCAGACTTCGACGCA 25888 28 100.0 32 ............................ CCAAAAATAAGCCAATGCCTTTTTTTGACCGT 25828 28 100.0 32 ............................ GTCAGCCGCTTGAGCAAAATTAGACATACCCA 25768 28 100.0 32 ............................ GACAAGGCATTATTGTTGACACCACGATTTTC 25708 28 100.0 32 ............................ TATAGCGCGCTGTTCTGCACGGGTGGCAAGTT 25648 28 100.0 32 ............................ TTTAGTGGTCGCACCAGCCACGCCACCTGTTA 25588 28 100.0 32 ............................ AGGATAAATATTATGCAAATGCAATCAGTAAC 25528 28 100.0 32 ............................ AGTTGCCGTTATCTTTGCGCCACTCCACATCA 25468 28 100.0 32 ............................ ATTTGCACGACCTGCAAATACTTCATCACTAA 25408 28 100.0 32 ............................ ATCCGCGTGAGTGTTGCGGCTTGATTGTCGGT 25348 28 100.0 32 ............................ ATAGTGATTTGACGTTTAGTCAAACCACCATT 25288 28 100.0 36 ............................ CGATGCAGACTATAAATTCATGACCATAAACTGGGC 25224 28 100.0 32 ............................ TTAGTCCCTTTGAGTGGTGGAGTACAACCCTT 25164 28 100.0 32 ............................ ATAAAAAAACCGCCTTATTTGGCGGTTAGATG 25104 28 100.0 32 ............................ AAAAACCGCGATCCCAATGCCATGCTCACTGT 25044 28 100.0 32 ............................ TTGAGTGATGAACGATTTAACGGTGCAGTACA 24984 28 100.0 32 ............................ CTACGGCAGCGCGTGGCGCGGCGCGTTGGGAT 24924 28 100.0 32 ............................ AGTGGGCATCACGTCAATAGATAAGCCTTCGC 24864 28 100.0 32 ............................ GTGATGCTCTCTGCTTCGGCTTTGCTTAATTC 24804 28 100.0 32 ............................ GACATTATCACCAATGCTTACGGTAAGCAATC 24744 28 100.0 32 ............................ CATAGCTTCGAGTTATTGGCATGGGTGCTAAA 24684 28 100.0 32 ............................ TAAAAACGCCACTTCATCCACAAACTGTTCAT 24624 28 100.0 32 ............................ TTCAATGGTTGGGTGTTTTTCTTGCGGTTTAT 24564 28 100.0 32 ............................ CTCTGCTGCTCCCTGGTTGGCTCAAGGGGCAT 24504 28 100.0 32 ............................ GACAAGCACAACAGTAAACCACAAAATTTGCG 24444 28 100.0 32 ............................ AACACAACCCAAAGTTTTCATCATTTCTTTAA 24384 28 100.0 32 ............................ TGGCTAATGAATGGATAAATGCTTGTCGTAAA 24324 28 100.0 32 ............................ CTTACCAATCGTCATAATTATGGTGATAATTT 24264 28 100.0 32 ............................ CAATAGACAGTATTATAAAAATCACGTCTGTC 24204 28 100.0 32 ............................ AAAAGAGGACGGTTCATGCGGTGAATGTTGTG 24144 28 100.0 32 ............................ TATCAAAATCGTGCGAATCACTTACAGTTTTT 24084 28 100.0 32 ............................ TACTTGCATGAGTGCCAATCCAATTTGATAAA 24024 28 100.0 32 ............................ GTAACCACGACAGCAAGGGGCGACAATCCGCG 23964 28 100.0 32 ............................ ACTTGGCAATATTAATCTAGGCAACAAAAAAG 23904 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ==================================== ================== 94 28 100.0 32 GTTCGCCATCGCATAGATGGTTTAGAAA # Left flank : TCGCTGGGCAAAGGTATTATATAAAAGCTTGGCGGAAGGCTGTGGCTTTAAATTTACCCGCGAGGAAGGCAAAAATGCCAATGATGATATCGCCGATATCGCCAATAGCTACCTTGACCACGGGAATTATATCGCTTATGGCTATGCGGCAGTTGCATTACATGGGTTAGGTATTAGCTTTGCTCTACCGATGCTACATGGTAAAACCCGCCGTGGTGGTTTGGTGTTTGATGTAGCAGATTTGGTCAAAGATGCGATGGTGATGCCACAAGCATTTATTTCGGCAAAACTGGGGCATAATCAAAAAGAGTTTCGGATGCAACTTATCGAGATTTGCCAAGACCAAGATGTGTTGGATTATATGTTTGGCTTCGTTGTAGACACTTGCCAAAAAATTAAATAAAATCAGCTGCTTATAAAAATCACTTTAAAACGAAGTGTCTTGACTGAATTAAAACGTATATAATTGATATCTGGGGATTTTGTCAGAAAATTCTCCA # Right flank : CATGAGTTTGATTGATATTGTTCATGCACCCTATCAAATTTTTCTAGTATATATCTACTTTGCATTTTTTTCGTCAATATTTCTCATTTTTATACGAGATAGTCCTAATCTAAAGTTAAGGTAAGCAATTTAATATATTGAATTTTTGCTTATGTATTATTTTATTAGTATGTGGATTTAGAGTCGTACCGTGAAAACTCAAAACTTTATATAGTCCGTATAACAACTTTTGTATCTATTTTTCCAATCTCAAGACGGTTAACTAAACTAGTGTGTCAATGTCTTGAAGTTTCTAATAGCCATGTTTTTAATTTGGAGGGAATAACTTTGAAAGGATTTTTTTAGGACATGAAGGTTTTTTAAAATGAGTGATAAAAGCTAAAAGAAATAAATTCAGTTTCATCTCTTTTAAATTTGAGTGGGGGTGAAAACCTACTTGCTCAAAAATTAACCAAGGCACAATTTGGGCACAAAATGGGCACACAAGATTTTTAAGCGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCCATCGCATAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGCCATCGCATAGATGGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //