Array 1 77678-80329 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAVB01000025.1 Sinirhodobacter ferrireducens strain CCTCC AB2012026 Scaffold22_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 77678 29 100.0 32 ............................. ATCTAGCGCGTTCGTTGGGGCGTGGTCTGCCG 77739 29 100.0 32 ............................. TCGATCAAGTCGCATCACCCCCACAAGAATGC 77800 29 100.0 32 ............................. ATCTATGGTGACGAAGGCTTCGGTCCTCTTCG 77861 29 100.0 32 ............................. GACCTGCGCGCCGCGGTGCAGGCCGGCGACAT 77922 29 100.0 32 ............................. CTATTCCTCGATCATTGCGGCATGACCGAAGA 77983 29 100.0 32 ............................. GCGACCTGCGCCGGCCAGATCGAGCTGCTCGC 78044 29 100.0 32 ............................. TCCGACCATATAGCTCACCGTCGACCCTGCTC 78105 29 100.0 32 ............................. GTCCATGATTTCTTCGCTGCCAGCAAGGGCCA 78166 29 96.6 32 ............................T TGAGAGGAGATCGAGCGGCAGGCAGGACAAAG 78227 29 96.6 32 .........................C... TCCCCATCACTGGCTGATAAAAAGCTCTCCCG 78288 29 100.0 32 ............................. TTCCAGGGCGGCACCGGCGCGGCCTGGTATCT 78349 29 100.0 32 ............................. CAAATGACCACCGCCATCGCCTATTGCTGGGC 78410 29 100.0 32 ............................. CTAAGATCCAAGAAAGGAACCCCCATGCCGAA 78471 29 100.0 32 ............................. TCCGCTACATCGCGATGACGAGGTTCTCCGGT 78532 29 100.0 32 ............................. CCCCATGGATGACGCCCCGAACATTGCCGAGA 78593 29 100.0 32 ............................. TCGCGCCGGCTCCAGCGAGGCGGATCATAGGC 78654 29 96.6 32 ............................T TCGTGTGCAGCGCGCGCACGAGCATCACCTCG 78715 29 100.0 32 ............................. GAAAAGCTCCTGTTTGGGTGCCCATTTGAACC 78776 29 96.6 32 ............................A TGGCCGGTAGCGCTATCATGCTACATATGGAA 78837 29 96.6 32 ............................A TGGCCGGTAGCGCTATCATGCTACATATGGAA 78898 29 100.0 32 ............................. CAGCTCAAGGCCACCTACGTGCACTACGGTCT 78959 29 100.0 32 ............................. GCCCCGGCGGCACGATCAGCGTTACCGATGAC 79020 29 100.0 32 ............................. CCTGAAAAACTCATAAGCTATTGTTTTTATTG 79081 29 96.6 32 ............................T CAGGGCCATCCCCAATCTCCTCGCGCACCCAA 79142 29 100.0 32 ............................. CGCTGGCGGCGGACCTCAAGCCACGTGGGCAC 79203 29 100.0 32 ............................. AAGGGATCTTGCGCAAAAGAGCAATGTTTTCA 79264 29 100.0 32 ............................. CGCCACCGCCAGAACGACCACCGCGCCCCACC 79325 29 100.0 32 ............................. TGATGCCGCGCGCCGATTCGGGTGGGCAGCAC 79386 29 100.0 32 ............................. AGACGACCCCGGACCGCGCCGACGGTCAGGAA 79447 29 100.0 32 ............................. TGCTCGGCCCCTTCGCGGATCACATCTCGCTG 79508 29 100.0 32 ............................. TTCGCATAGTCGGGCGTCACGAACTTCGGCTT 79569 29 100.0 32 ............................. GCGACATCCGCAGCGTGTCCATCGATCAGGCC 79630 29 100.0 32 ............................. TTCTTCAGTCGGTTAAGTGCCCCACCGATCTC 79691 29 100.0 32 ............................. CGTGGTGGTTTGGTGACAGGGCGAAGAAGGCA 79752 29 100.0 32 ............................. TGGTCCCTGTGGCCTTACGGCTTCGTGACCCT 79813 29 100.0 32 ............................. CCGAAGGCATAGAGCGGCGCATAAGCAAGAAA 79874 29 100.0 32 ............................. CATTCCGGCGGCGAAGGATCTTCTGTTCTTCG 79935 29 96.6 32 .........................C... CTCCATGCGAGAGCTGAAAGGAGATCCGGCGT 79996 29 100.0 32 ............................. TCGATGATCGCGCGGTCGCAGCCGATCGACTG 80057 29 100.0 32 ............................. TGGAGGATGATCTTCGAGGCGCGTGCGGCGGC 80118 29 100.0 32 ............................. GGGGGATTGGCGTGTCAGGCTCCTATCCTCGG 80179 29 100.0 32 ............................. TCGGCCGCGATCCTGCCGCAGGACGCATGGAA 80240 29 100.0 32 ............................. GACTATCAGCCGAGCCAGATGGTCGTGCGCTG 80301 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.5 32 GGCTCCCCCGCACCCGCGGGGATAGACCC # Left flank : GCCGCAAAGCTCGTGACCGAGCGCCCTTCCGAGAACATCGAGAGGGTAACGCGCCGGATGACCGGAGCAGCCCTTGCGAAGCAAGCAGTCATCCCCGAGATGATCGAGCGGATCAAGGCCCTGATCGAAGGCCGCGGTCCCTGATGCCCCTGACCATGATCGTTACCCGCGACGTCGAGATGCGCTATCGCGGCTTCCTGACATCGGTCATGCTGGAAGTCTCGCCCGGCGTCTATGTCGCCCCCGAGATGTCCGCCGCCGTGAGGGGCCGGGTGTGGTCGGTGATGACCGATTGGTGGTCTGCGCTCGGCCGCGGCTCTCTGACGATGGTGTGGCGCGATACCAAGGCGCCCGGAAATCTCCGCATCGAAACTTTGGGCGAGCCGCCAAAGACAATCGTTGACGCCGATGGCATTTTACTCGTTAAACGAAAGTAGTCGGGAAAAAACTCGCCTCCTGCTCTTTGAAATCGTTATGAATTCAGCGCATTAGTCCTGAGA # Right flank : GCGGGTGGCCGGGACGGCGTATCAGAATGAGCACCTCCCCGAAAATTGGACAGTGACGGAAGCTACGATCTGACGTCTGCTGGTCTCCAAGAACGAGGAGATCAGAACATGTCGAAACGCAGAAATCACGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0.41 Confidence: MEDIUM] # Array family : NA //