Array 1 49377-50270 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FBKO01000012.1 Campylobacter coli isolate H072620566, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     49377	    36	  83.3	    30	AACCG.T.............................	GGAAAAGAGTTAAAAGAGCAATTGGAATTG 	
     49443	    36	 100.0	    30	....................................	CTTAACCACAAATTCGCTCACATAATCAAT 	
     49509	    36	 100.0	    30	....................................	TCAGCTTTAACTAATATTTCATTTTCTAAT 	
     49575	    36	 100.0	    30	....................................	AGCCATTTTGCAGATATATATTCATTTTTA 	
     49641	    36	 100.0	    30	....................................	AAATTAGTATTTTTTAACTCGACTGTGCCA 	
     49707	    36	 100.0	    31	....................................	TATACTTAGCGGTGCTACAAAACAAGATTTT	
     49774	    36	 100.0	    30	....................................	GGGACAGGCGGTAATTTTGAAGACTTACAA 	
     49840	    36	 100.0	    30	....................................	ACCTATGGCATTAAACAATTTTTCACATTA 	
     49906	    36	 100.0	    29	....................................	TCTTTAATATCATCAACAGAACCTTTAAA  	
     49971	    36	 100.0	    30	....................................	TAAAAAAGCATCAGGGCTAGCTCCATTTTC 	
     50037	    36	 100.0	    30	....................................	TGCAGTTGATAAGCTGAAATTATCGTGTAT 	
     50103	    36	 100.0	    30	....................................	GGAAAAGAGTTAAAAGAGCAATTAGAGTTG 	
     50169	    36	 100.0	    30	....................................	AGCTTCACTCATAGGAAATATTTTATCGCT 	
     50235	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        14	    36	  98.8	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT	                               	       

# Left flank :   TTATATCCTGCTCATCTTTCACTTGCTAAGTCTTAATCATAAGCTTAAAAATGATTATTTTGCTAGAGTTGCCATAAACTGCGTGGCATTATTTATTTTTATTTATGCGGGGGTTAATATTTCGATGACTATAGGTTTTGCACCGGTTGTCGGTATACCACTGCCTTTTTTTAGTTATGGTGGAAGTTCTTTTACAATTTTTATGATTTTCTTTGGAATTTTACAACATTTAATCACTTTTAGATATTTTTGGACAGATAATAAAAATAAATAAAATAACTTTAAGCAAAGATAAGATATAATTCTATCTTCACAAATCAAAGGCGGATTTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTGGTCGCAGGTTCGAGTCCTGCTAAATCCACCACTACTTTAGTTGTAGATATCTAATCCCAAAAAATGAATTAAATTAACTTTAACTACAAATAATCTATACCGTTTACTATCACCTTAAATTGAAATAGA
# Right flank :  TAGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTGCTTGATTGGATATCAATATACTTTTAAAAGCTTCATCATAGGCCATGTTTTTTGCTCGTCTTTAAGGCGATATCTTCCCTTGGTTTAAAATCAGCCTTGATTTTTTCTCCAAGCGGGGTTATAATGTATTTTTCAAAAATTCTCAATCCCTGAATTCCTAATTTTTCAGCCTTTACACTTCCTTCTTTTGCATTTACAAACAATAGCTTTTGATTGTCTGTTAAGTTTTCAAATTTATTATCATGTTTTTCAACACAAATACTTGAGTTACTGATATCAAAACTATTATAATAAGCAAATTCGGG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.56%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.41   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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