Array 1 32248-31763 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHFQ01000029.1 Capsulimonas corticalis strain AX-7 Scaffold29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 32247 38 100.0 37 ...................................... ATCTCATATCGGATTTCTTCCAGTTTTTCCTTGTCTT 32172 38 100.0 35 ...................................... TTCAGGCGATTCTTGATGATACCGAGAGTGACCGT 32099 38 100.0 36 ...................................... CTTGCTCAAGGAATGCTCCTTATACGCAGACGCCGG 32025 38 100.0 37 ...................................... TCTCAAGAGGCTTTTGTTGATCAATCAACCCATAATC 31950 38 100.0 37 ...................................... GCGTAGTGAGACGATCCGGCCATGTAGTCAACGGCTC 31875 38 97.4 37 .....................................T CGGAGAAAACGGTCATCAGTCAGCTTGTAATGCCTAG 31800 38 94.7 0 ..............A..........C............ | ========== ====== ====== ====== ====================================== ===================================== ================== 7 38 98.9 37 GACAGAATGATAGAGGATGCCGTTCTGGCATTGAAACG # Left flank : GCACGTTAAAAGAGGATGTCGTCATGTCCACTAGTGTTCGAAGCCGTTATCTAATCGCTTATGATATTACGGATGACGCAAAGCGCACAAAACTTTCAAAGATGTTGCAGGATTACGGCGATCGAGTGCAGAAAAGCGTGTTCGAAGCGGACCTTACTTCCCAGGATATTCAGGCAGTAATGCGAAAGGCGGCCGTTTATGTCGGCAAGGAAGATAGCCTACGAATCTACCCGATGTGCGCGAACTGCAGAAAGGGCGTCCATTCATTAGGACAGCCCCTATCCAGTCCAACGGCGACTTTCTGTATTGTCTGAGAGGCCGTGAATTAGGAACGTATTACTGGCGCCCTAACCTCAAAAAATCCAAATAAGCTGTTTGGCTAGGGCAGCACCCTTGAGAGTAATAACGGGATGAAAATTATGAAAAAACGGCGAATCAACCTTTCGGCTTCTTTTGATGAATCGGTTAGGGCAATTCAGAAGGAAAAATGAGAAGCAGGG # Right flank : GGCTGAAAGTCGGTCCAATACGATAGTGCGACGCCCAGGACAGAATGATAGAGGATTGATCGTTACTACTCTGTGCATCAGCAGTAACGATTTCCTCGAAAATAATCGCTTAGATTTGTATCGACTGTCCCATCTCTGTGAATCAACAAAGTTGAAGCGGCCATTTTGAATTAATCCTAAGTTGACCTGTGTCTGTATGGACACTTCAGTGTGATTATCATTAGTCTAAGTCTCCAGTTTGTGGTTAGTGCAATGAAGGGTTAAATATGCGAACTTTTCAAACAATTATTATTTTAGTAGGTGAGAATCCTTTGCCCGCATATTATGGCGTGTTAAATTTCGCCACATCTGACGCTCACGTATTGCTCTTGCACTCCGAGAAGACCTTCTCTTTTGCGGATCATATTAAATCGATTATTCATCGGGATAATGATGAACTCAGACTGCAACGTAAACCGGAACTGCTTTCTCCACTCAAGAATCCATTTGATCCTCAAGAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACAGAATGATAGAGGATGCCGTTCTGGCATTGAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.63%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 163657-164498 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHFQ01000006.1 Capsulimonas corticalis strain AX-7 Scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 163657 30 100.0 34 .............................. ACCTCTAAAACGAGGACGATAGCGCACAATAAAA 163721 30 100.0 39 .............................. CGCTTTGGCGCTATAGGAGGTTCTCTTGAAGCACTGGGC 163790 30 100.0 37 .............................. CTCTGCGCCTCGAAGATCAGCGAACGGCGGCGCGAGG 163857 30 100.0 39 .............................. CAGCTCACGCGTTCCGGGAGTTACGAGGTCAATGTTCCG 163926 30 100.0 38 .............................. AAGTGGCTGCACGAGGCTACAGCGGGACAGCCGATCTC 163994 30 100.0 42 .............................. TCTCCCAGTCCGCTGCCGAGGAAATCGTCCATCGCGGACCTC 164066 30 100.0 35 .............................. TATGTAAATAGGCTATGGGCATCAGCCTGGACGGA 164131 30 100.0 37 .............................. AGGAGATTGCCTATGATGCTGATGCATTTCTTGACCG 164198 30 100.0 37 .............................. TCTCGTAGCTCGTCGCTTCCGCCTTGCGCCCGTCCAG 164265 30 100.0 37 .............................. AAGGGCTCCAATGAGGCGGAAATCATCGCGTGGCAAA 164332 30 100.0 38 .............................. TTTGAAGCGCAAATCTCCGGCGGTTCGATAATCGCTAT 164400 30 90.0 39 ........C......C..G........... GTATGACGGCTTCCCGCGTCGCTTTCGCCCTCGGGACTT 164469 30 80.0 0 ..GC...C........T..........G.T | ========== ====== ====== ====== ============================== ========================================== ================== 13 30 97.7 38 CTTTTAATTGAACCGTAGCGGTATTGAAAC # Left flank : TCGTGGCTTCCTATGATCGACAACACTCAAGGTACGGGCATACTGTACCGCACACCATCGCCCGGCGCGAGCCCGTTTGCGCGAAGGCAACGCACGTCCCCTTGAGGGAATCCGCCGTTAGTAATGGCGGCATGAACACCATCGAACAGCGAAGCTGGGACGAGTACAGGCGGGCTCGGCAACGGGAGTGGACCAAGTAGGCGAAGGAAGCCATGCGGCACAAGTCGGAACGCGTGGCATCGTGCTGAACAACTATTTGCCTAACAAGGGCAGGATGGTTGTAAACACGATGATCTCCTGTGACGACATAGGAACTATCTTCCGTCAATACCAATTCGCTTGTGTCGTCGGCCTCCGATAGCCCCTCTCACAGTAAAGGCCGACGACTCTTGAAGGAAATTTCCATCCCCGACGACCCTATCAGATCCCCATGATCGGGGGTACAATATATTCGTCTACTGTATATGGGAGTATGTTTTCCGAGGACGTCAAGATGTGGG # Right flank : TCCAAAACACGCTGAGAGGGAAGACGAATTTCGCCCCCTTGCTTCTGCTCTCGCACATATTGTAAACCACCGGCGTTATGAGTCAACCCGAGCGATTACAGTGGATCGACGCCGCGATCCGAGCTGAGCAGTTTCCGAATGTGAAGGTTGTCCAGCAGCGGTTTGAGGTCTCGCGCCGAACCGTGTTCGGGGATATCCGATACCTACGCGACCGAATGAACGCCCCCATCGTCCACGACCGCGTACGCGGCGGATGGACCTATACGAGTACGTCCTTTGTCTTTCCCACCCTGCTGATTACCACCCAGGAAGCCGGCGCTCTGAGCCGGGCGCTGATCGCCGCCGTGGAGTTCCTGGGGAAAGGCGACGCGGAGCCGCTGCGTCTGCTGCTCCAATCCTGCACACGCTTTCTTCCCGACCTGGATCAGCGTCACCTGGAAACCGTGACCGGCGCCATCCGCCCGTCGCACAACGTGAGCATCCCCGACGCACTGCTGGAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGAACCGTAGCGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 2 174135-174997 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHFQ01000006.1 Capsulimonas corticalis strain AX-7 Scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================== ================== 174135 30 100.0 37 .............................. TGGTTGTTCCCGTGGTGGATCCCGTGGTTGTTCCCGT 174202 30 100.0 43 .............................. CAAGCTGGATCCCAGTTTACTACCTATGACACATTCCCGGCCG 174275 30 100.0 38 .............................. GGTTTCCAGCTCATCACATGCGCCCATTGTTTAGGGCG 174343 30 100.0 40 .............................. AAGGGCGAATAATGGATCTTTCAGAATTCACGATTAACTG 174413 30 100.0 38 .............................. AGATTATCGCTCATCCCGACACCGCCGTACACATTCGT 174481 30 100.0 40 .............................. AAAATTGGGTCGAGAGATAACCCTGCCTCCCGCGCGACCA 174551 30 100.0 47 .............................. ATCTTCGACGTCGTCCGCACATTGTTCGACAAGGGCCGCTTTTAATT 174628 30 100.0 38 .............................. ATGATGTATGCGGTCCCGGATTTCCGCGTACTCTTCCC 174696 30 96.7 37 ................A............. AGGCTTGCGCTCAGCTTTTGCGTATGCCTGCCGCTCT 174763 30 96.7 43 ................A............. CTGGATACACGTTCACGGCCAGCGGCGAACCCGTCGCCCCAGC 174836 30 96.7 37 .....................T........ AGATTGATATAGCTGCGAAGCGCGGAGCGTTTGATTT 174903 30 93.3 35 ................G......C...... CCTTAATAAGCCGCAGCCACTTCCAGGAGAGCGTC 174968 30 90.0 0 .....................C...A...T | ========== ====== ====== ====== ============================== =============================================== ================== 13 30 98.0 40 CTTTTAATTGAACCGTTGCGGAATTGAAAC # Left flank : GATGTCGAACCTTACCGCGCCTTTCGCGCATGGTGGTGACGACGAGGGAAAGGACCGTCATGTATATCATTCTCGTATACGACATCGGGGAGGAGCGGGTGCACAAAGTCTGCAAGTACATGCGCCGCTACCTGCCACGCATCCAGAACTCGGTCTTCGAAGGCGAACTCTCGGACTCCAAGCTCGCCAAGATGAAAGCCGGCCTGGAAAAGATCATCGTCTCCGGCCGCGACTCCGTCCTGCTGTGGGTGATGCGCGACGACCATTTCGTTGACCGCCAGATCATGGGCGTCGAAAAGCTGCCGGTCGACAATTTCTTCTGACCAATCCCCCTTCCGCATCGTCGTCGGCCTCCGGTACCCTCTCTTCACAGTAGAGACCGACGACTCTTGACGGGTATTTTCCCCATCGGCAGCCCTGTCAGAACGCAATGATCGGAGGTACAATATATTTGCCCTCTACATATGGGCGTAGGGCTTCGACGGAAGTCTAAATGTGGC # Right flank : TCTAGCCTCGCCGGGAGATGCCGCCACTCTGTGCTCTGTTACCACGCAGCGCAGGCGGCTCCTCGTAGTCTTCCGCGATGGCGGCGATCAGCAGCCGGGATCTCTCCCGCGCCTTTCGGTACGGCAGCCAGTCCAACTGCCGGCGGATCCGCCCGGCTGGAAACTCATCGAGGATCGCCTCCGCCTGGTCCCCGCCGATGCCGACGCTGAACAGGCGGCGGCGCAACTCGACGCGCTCCCTATCTTCCGCCCCCCCGCCCGTGGACCCGGCGTTCGAACCGCTGCCGCCAGGAAGCTCCCACCCGTAGAACTCGGCGATATCGCGCTCCACCTCGTCCCTCGGCCTCGTGTAGCGCGCGCGAGAGTGGGCGATCGCGGCGTCGCGGGTGCTCCGCTGCGGCTCCTCCCGAAGCCCCTGCCCTGAGTTCGACGGGGGCTCGGGCTCGCGGAGAACGTCCGCCAGGACCCCGCGCCCGGGCGCGAACGCGTCCATGCCGCTC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGAACCGTTGCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //