Array 1 167326-167918 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JMMX01000007.1 Enterococcus faecium strain UCN72 Contig6, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                                         	Insertion/Deletion
==========	======	======	======	====================================	========================================================	==================
    167326	    36	 100.0	    30	....................................	TATCACACACCTTCACGCTAACTGTGTATA                          	
    167392	    36	 100.0	    30	....................................	TGGATTTACTTTTATCGCTATGGGGTTTAC                          	
    167458	    36	 100.0	    30	....................................	AAAAACAAACGATGAGGTTGTTGATTCTAC                          	
    167524	    36	 100.0	    29	....................................	GAAGTTGAAGGATTGAAAAACTTCAAAGA                           	
    167589	    36	  52.8	    56	...................NNNNNNNNNNNNNNNNN	NNNNNNNNTTTGAATGCTTCCAAAACCTTTGAACCGACAGGACAGATGAATTTATT	
    167681	    36	 100.0	    30	....................................	AACGCTCTGATGAAGCATTGAATACACTCG                          	
    167747	    36	 100.0	    30	....................................	CTTATCTATTAGTGAATTAGCTCGTCGAGT                          	
    167813	    36	 100.0	    31	....................................	GTCACACCTATTTTGTGCTTCTCTGTGTGAG                         	
    167880	    36	  91.7	     0	.........................A....T....A	|                                                       	AC,G [167908,167914]
==========	======	======	======	====================================	========================================================	==================
         9	    36	  93.8	    33	GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC	                                                        	       

# Left flank :   GCCAGCTCAATGAAAAAGTAGAAGTGAAATCAATGATTGATAAACTGACAGCGACAATCAGTGAGCTGATCGGGTACGAGTTGTTGGATCACGAACTCGATTTAGAAGGAGACGAGATCACGGTCTTGGAATTATTCAAAGCATTGGGTATCAAGATCGAGACAAGAAGTGATACTATTTTTGAGAAATTACTTGAGTTGCTTCAGGTTTATAAATACTTGTCTAAGAAAAAATTATTGGTTTTGATCAATGTGTGTTCCTATCTCACGGAAGAAGAAATGAGCGAAGTGCAAGATTATATTTCGTTATATCATATGGAAGTGCTATTTGTAGAGCCGCGTTCGATCAAAGGGATAAAACAATTTGTCTTGGATAAAGACTATTTCTTGAACTTGGAAAACATGGTATAATGGTAAAAAAGAGAAGCGTTCAAAGCTGAAGTTTTGCTATGAACGAGTAGCGTGATTACGAAACATTGACGGAAAAATTTTTTCTGCGAG
# Right flank :  AACAGCCTTGCACTTATCGAAAGAGGATTAGTGTCAAGGCTGTTTTTCATATGAGTGGACGGAAATATCTGTTTTCTTTTACAATTGATAATAGATACTTTGCTGTATAGTCAGTAGCTGATATAAAAGTATCGGCTCTTAAATGGAAAAAAGATAGGTGGCGACGCAATGTTTAACACACAATTGATCGGTTATTTAGAATGGATCATTGCTATTTTAAATATTTGTTCTATCGGTATCTTAATTGCTGGGATCGTTCTTGTTCTATTCAAACTTTTTGATTGGTCTCATGTCAAGAAAAACTATGCAGAACGTAATGCTCGTAATGCAGATACAAGAAAACTGTTAGCAAGTTATATTTTGTTAAGCTTGGAAGTACTAGTCGTTGCTGATATCATCGAGTCAGTTATCAAGCCGACTTGGACAGATATTTTGAAGCTTGCACTTATTATTATCATTCGAACAGTCATTTCTTATTTCTTGAATCAGGAAATAGAAGA

# Questionable array : NO	 Score: 5.84
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.20,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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