Array 1 73524-73024 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYZY01000002.1 Clostridium transplantifaecale strain Marseille-P8228, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 73523 32 100.0 36 ................................ AAAGACCAGTACGATGCAGTGCTGAAAGGACCCGAC 73455 32 100.0 36 ................................ AAGGACAAGGTGGAGCTGTCCGGCGGCCTGGACACC 73387 32 100.0 34 ................................ CGTTATGGGAATGTTATTTCAAATTTGTCGGGTA 73321 32 100.0 35 ................................ ATATTTCATGGCCCCTCCTCTAAATCATCATCATT 73254 32 100.0 34 ................................ CACCTTATCCTCTCGACTTGACTAGACCAAATGT 73188 32 96.9 35 .......T........................ GTCTTTGTGCCAAGCTCGATATTTGTCGGAGACTC 73121 32 100.0 34 ................................ CATCTATCGATCTCTGCTATAAGATCGTGATCGA 73055 32 96.9 0 .....................C.......... | ========== ====== ====== ====== ================================ ==================================== ================== 8 32 99.2 35 GTCGTTCCCCTCGCGGGAACGTGGATTGAAAT # Left flank : TTTCCGCGTGGAAGAGCTGGTAACTATACGTGAATAACTGATGGCAGAAGTAATAACTTGTCATTACTGTTAGTCCGATGAAAAGCGGAGTGGAATTGGATTTTGAAATTGTATACAGAGAGCTGGGCGGAGTAGATTCCAAGAGATAGCAGGCCGGTGCAATGGGAAGAGGAACAGTACAGGGGTGCTTTATATTTTCGGCTGGAAGAGTCCCAAATGACTCCGGGTGAGGGAACTGTAAATCAAAACGTCAATACTGCAATCTGGAGTATAAGGGCATTGCTTTTCTTGCCAAAGAAATGGCAAGAAATAATGCTCTTATTTTGTAGTACGAATGTATAGCGCACATGAAAAGCCCAGGGGATTCGCACCAGAAAAAATGCACAAAAAGGGGAGGGGATAGGATGGAGTAGCCTTAATTAATGTGAGTATTTTGTGAAAATATTTAGATGATACAAAAAACAGGGCTGTTTTGTGTTATAATGTTGGATATATTTGCT # Right flank : TATTTGCATCAAAATATCAATACTATGCAGTATAAACAAAACGAAAGCCAGTAACTTTAATTACTGGCTCAGCTTGTCGAAAAACTATATTTTCCTTATATCAGGAGTTTGAGGGTGCAACCCTCATTTTAAATCACGTAGGTGGAATTTAGTTCCGCCGTAGTGTTGAACTGCCGATTTCCAGGGACTTTAGCCCTTGCGCGAGGAAATCGGCAGTTCTTCCTTTGGTGACTAGAATTTATGGCATAATGCCATAAACTCTACAGAGACTTACAGACTCAAAGTAAGTGAATCTAAAAACTCCACCATTTTCTAATAATAATTACATTACTGTTAATTTAATTTTCCCGATCAGACAACAAATCTACATTGCTCCTTATCCCACCCTTCACACAACATCAACCCCATGAAACCCCAAAAAATTCCGTGCTGCCTGCGACAGCGGATATTCTTTATTAACAATAAAAGCACTGGTAATAAAAAGATTTTCATCCGAAAAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCTCGCGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : NA // Array 2 81560-80645 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYZY01000002.1 Clostridium transplantifaecale strain Marseille-P8228, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 81559 33 100.0 36 ................................. GGAAAAAGTAAATGACGCCATCAAAAGGTCATGCCT 81490 33 100.0 37 ................................. ATCTAATTTCCCCCTGACATAAAAAGAACGGTGCAGC 81420 33 100.0 36 ................................. TATCCTTACGAAGTTAGAGACTCTTGGCTCTGGTTC 81351 33 100.0 33 ................................. ACAATTGCGGCCAGTATGTAAATACAAAAATCC 81285 33 100.0 34 ................................. ATCAAAATAGCAATGCAAACGTGTCAAAAAAAAC 81218 33 100.0 36 ................................. CATTTCTTTACGCTTTCGTGAGCTGCGGCCGAACAT 81149 33 100.0 36 ................................. AACCGTTGTATTACCTGAAGCAACGGCCGACGCATG 81080 33 100.0 34 ................................. CAAAGTAGCACCCCCTTTCCGCTGTGCGGTATAG 81013 33 100.0 35 ................................. GAAATTTCCAAGTAGTTGGATATGCGCGCACCAGA 80945 33 100.0 35 ................................. TATTCCTGCTTCAACAGCTTTCCTGAATGAAAATA 80877 33 100.0 35 ................................. CATTCCGTCTTTTCTGGCGCTTACTCCTGCGCATG 80809 33 100.0 33 ................................. TAATGAGTCCATTGCAGAAGGGGTTGACTGTCC 80743 33 100.0 33 ................................. CATTAATCGTATCAATGACCACTGTCTTGAATT 80677 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 14 33 100.0 35 GTCGTTCCCTTCGCGGGGAACGTGGATTGAAAT # Left flank : ACGCGTATCCGCCATTTTTGTGGAAGTGAGGAGAGAATTTGCTGGTATTGATTACATATGACGTGAATACGGAGACAGCCGGAGGAAAAACGAGACTCAGAAAGGTTGCCAAGCAATGTGTGAACTACGGTCGCCGAGTCCAAAATTCCGTGTTTGAGTGTATCTTGGACAATGCGCAGTGTGTGTTGCTGAAGTCGATTTTGACAGAGATTATAGATGAAGAGGTCGACAGCCTGAGGTTCTATTATCTGGGCAATAAGTATAAGACGAAGGTGGAGCATATAGGGGTTGATAAAGGAATTGCGGCGGATGACACTCTGATTTTGTAGTGCGAATGTGAAGCACACATGAAAATCCCGGGGGATTCGCACCGGAAAAAGTGCACAAAAAGGGGAGAGGGAGTAGAGGTTTGGTTAGATTCTTGTGTGGTATTATGCAGGAAATATTCTAATAATACAAAAATGTGGCTGTTTTGTGATATAATATTGGATATATTTGCT # Right flank : CCAATTGTAATTTTGCTCGCGTCAAACAACTGCGCCGTCGTTCCCTTTGCGGAAACATTGATTATGGGTAATCGATGGGTCTCTAGAGCCTGGAGGGAAAAGCCTGTTTAGCAACATTGCGAAAAACATATTTTTAGAAGCATACTGCCATGCGCTGCATCATATGAGGCATCGGAAAGGAATACATGGAAACAGGATGGAGGCTAAGGATAAGGAGTATGATAAGTCAATGGATATGGCGGCAGGGCGGTTGAGCCAGTTAAATGATTGCCTTGCCAGGATTGGTTTTGAGAAAGAGACTGTCAAGACCACGGATTTTAATGTCAAGACAGACTACGACAGCCGCAAGGACAGGCAGAAGAATTATCAGCGGGTATTCAATGGTTTCGTATGTAGTCATCAGCTGAAATTGTCAAATGACTTTGATATGAAAAAACTGTCACGAGCATTGGCGGCCATTGCGGACTGCTGATACACCCTGAGCTGTCTATTAAATATAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCTTCGCGGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : NA //