Array 1 1990395-1990606 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070356.1 Pseudomonas sp. PDNC002 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1990395 29 100.0 32 ............................. TCGAGATCCCAGGGTTCCTCGACAGCGGTCGA 1990456 29 100.0 32 ............................. CCGCTGGCGAAGGCGTGGTTGCTGTGTGAGAA 1990517 29 100.0 32 ............................. GTCTACGACGCAGCCCAGTCCCTGGCCCACAT 1990578 29 89.7 0 ............CT.......C....... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GTGTTCCCCGCGTATGCGGGGATGAACCG # Left flank : TGGGCGGTGCTGGCTACGTCGAGGACACCATCCTCCCGCGCCTGTACCGCGAAGCGCCGGTCAACTCCACCTGGGAAGGCTCGGGCAACGTGCAGTGCCTGGACGTGCTGCGCGCCCTGTCCAAGGAGCCTGGCGTGCTCGACGCACTGTTCGCCGAACTCGGCGACGGCCACGGCGATGCGCGACTGGCCTCGTTTATCGGCAACCTCAAGGCGTCCTTCGCCGACACCCAGGACATCCAGTACCGCGCCCGCCAACTCACCGAAAACGTCGCCGTCGCCCTGCAGGCCAAGCTGCTGCTGGAGGCGGGCAACTCGGTGGTTTCCGACGCCTTCATCGCCAGCCGCCTGGACGACGGCGGCCGCGTCTACGGCACCCTGCCGCGCGGAGTGGATGTGGAAGCGCTGGTGGCACGGGCGACGCCGCATCTGGCGTAAGGAAATTTCGGTAGAAATTTTCGGGTTGAAAAAAGACCTATGGATCAATAGGTTGCTGGAAGA # Right flank : GCACCCGCCACAACATATTTCTGTCATCAGGTTGATTTAACCCTCCCGCTCGTCCTGCCAGCACGAAATCTGTCATCCCCTTCCGCCACGGAAGCAGGCAAGATGGAGCTGATCGTTCAGACAGGATGCCCACCATGACTCTCTCGACTGGCGATGACTTCTTCGTCGCCCAGACCGCCGAAGAGGCCGTCGATCAACTGGCCGTGCTCCACGAGCGCGCCACCGGCGCCCTGAACCAGGCGCTGAAGCGGTACCTGAAGGACCGCGAAGTCCCCGACGCGCAGCAGCGCGAACAATTCCGCTACCCGCTGCTGCGGGTGACCTACCTGTGCCAGGGCGAAGTGCCATCTACCACCCGCGCCTACGCCAAGGTCCAGGTACCCGGCACTTACGCCGTGACCATCACCCAGCCCAAGGCCTTCCGCAAATACCTGCTCGAGCAGCTGCGTCCGTTGATGGAAGACTTCACCGTGCGGGTGGAAGTCGGCGTCAGCCAGCAG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-14.10,-14.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //