Array 1 236168-233016 **** Predicted by CRISPRDetect 2.4 *** >NZ_LREE01000006.1 Acinetobacter baumannii strain AB4448 LV47_contig000006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 236167 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 236107 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 236047 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 235987 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 235927 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 235867 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 235807 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 235747 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 235687 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 235627 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 235567 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 235507 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 235447 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 235387 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 235327 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 235267 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 235207 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 235147 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 235087 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 235027 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 234967 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 234907 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 234847 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 234787 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 234727 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 234667 30 100.0 29 .............................. TTTTCTGTTAACTCTAAAATACCCTTCCG 234607 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 234547 30 100.0 29 .............................. GTCTGATCCGACAATTTGGCTGAGTACGT 234487 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 234427 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 234367 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 234307 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 234247 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 234187 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 234127 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 234067 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 234006 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 233946 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 233886 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 233826 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 233766 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 233706 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 233646 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 233586 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 233525 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 233465 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 233405 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 233345 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 233285 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 233225 30 90.0 29 .......A.....C...T............ GGCGTACGGATAACGGAAGAAAGCATAAG 233165 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 233105 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 233045 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //