Array 1 86655-85433 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHKV010000022.1 Sphingomonas pseudosanguinis strain DSM 19512 sequence22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 86654 36 100.0 30 .................................... GCGCATCCTTCATCAAAGCACCAAACGTAT 86588 36 100.0 29 .................................... CTGTCCGCCAAGAGCCGTGATCTGACCCT 86523 36 100.0 30 .................................... ACCGATTGCCCGGCTGACGATACGCAGCGA 86457 36 100.0 30 .................................... TGGTCGCAAGGTCGCCCTGTATCTGGAGCA 86391 36 100.0 30 .................................... CGCCGAAAGCGCCGACAGATAGTCGACACC 86325 36 100.0 30 .................................... CTCGACATGGAGGCGACCGGCCTCGATCCC 86259 36 100.0 30 .................................... CCGACGCGCACCTTGACGTTGTGCTAGAGA 86193 36 100.0 30 .................................... ACCGTCCACGGACTTGACCTGTGGCTGATC 86127 36 100.0 30 .................................... GAATTGTTCGACCGCGACCTCGCCAGACCA 86061 36 100.0 30 .................................... CCGGGTGTCGTGTCGTGGGAGACGGAGGTC 85995 36 100.0 30 .................................... CATCTCGGCGACGGTGGCGGCGGGAACGTC 85929 36 100.0 30 .................................... GCCGGCGGCGTTCGCTACGTCCTGGCGTTC 85863 36 100.0 29 .................................... CGGGGAGCTGCGACCAATCCGACCGCTCG 85798 36 100.0 30 .................................... TGATCGGGGAAACCTATTATGGCGGCAGCC 85732 36 100.0 30 .................................... GCGCTGGGTGACCTGAACAAGATGAAGTCG 85666 36 100.0 30 .................................... TTGTAGTGGTCCAGGAACGCCTTGAGTTGC 85600 36 100.0 30 .................................... AGCGTCACCCGCGCCGCCGTCGTGTCCGTC 85534 36 100.0 30 .................................... GATGGTCGAGAAGGCCGAGCGCCAGCCATG 85468 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GTTGTCGCTGGACCGCAATCTCTGAGCGGCTATGCT # Left flank : CCTGATCGAAAACGCATTCTGCCGTCTCAAAGACTTCCGCCGTGTCGCAACCCGCTACGACAAACTCGCCGTCAACTTCCTCTCAGGCGTCGCCATCGCAACCGCGCTCGCATTCTGGCTCTGATTGAGTCTCGACCATAA # Right flank : TGATGGTGGGGTATCGCGTTGATCCGCAACGACGAAATCCCCCATCCAGCATAGTCAAAACGGTCGCGAATCATCAGAATAGGGCCAATTGATCGGGGTTTTTGCGCGGCTGCCGGCGAGATTGGCCGGCGAAGCGGATGATATTCTCATATTGGCGGTCGGTGAAGCTCAATATGTGGATCTCGCCCTTGTCGGGCAGGTTCGCCTCGATCCGGCGTAAGTATGCCTCCATCTGCTCCTTGCCGCTGCAGAAGCGGGCATAGACCGAGAACTGGCTCTTCTCGAACCCTTCGTCGAGCAGATATTGGCGGAATTTGGTGGCGGCGCGCGATTCGGACTTGGTGGTGACGGGCAGGTCGAACATCACGAAAATCCACATCAGCCGATATCCCGACAGTTGCGTCGCGCCGCTCGCGGGGATGGGCGTGGTGGCGAGACGACGGCTCACCGCGCGATCAATCCGTCCAGGGCGGCCAATTCCAGCGCGGAGGGCGGCGCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCGCTGGACCGCAATCTCTGAGCGGCTATGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATGAT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.50,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 55-288 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHKV010000080.1 Sphingomonas pseudosanguinis strain DSM 19512 sequence80, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 55 36 100.0 30 .................................... CCCGCTCCTATCAGGAAGAGAACGACATCC 121 36 100.0 30 .................................... CAGCTCGGCGAACGAGGCGGAGATCTCGAC 187 36 91.7 30 ................T....G.........T.... GGCGTCGGCTTTCGCTCCGTCCTGGCGTTA 253 36 97.2 0 ......................G............. | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.2 30 GTTGTCGCTGGACCGCAATCTCTGAGCGGCTATGCT # Left flank : CCGCAATCTCTGAGCGGCTATGCTCTCGACATGGAGGCGACCGGCCTCGATCCCG # Right flank : CGGGGAGCTGCGACCAATCCGACCGCTCGGTTGTCGCTGGACCGCA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCGCTGGACCGCAATCTCTGAGCGGCTATGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATGAT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //