Array 1 15109-21861 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADYXF010000042.1 Pseudoalteromonas sp. SWXJZ94C WXJ-z94c-3_scaffold42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 15109 28 100.0 32 ............................ GGCAGAGCCAGTTAAACCAGTTTCGCCCTTTT 15169 28 100.0 32 ............................ ATTAGATATATTTCGCAATGCATGAATTACGT 15229 28 100.0 32 ............................ TAAAATAAATTGTTGATACTCGCTAGGCTCTA 15289 28 100.0 32 ............................ GTTAAACCCTCACGTGTGATTATGTCAATGTT 15349 28 100.0 32 ............................ CCATAAAAAAAGCCGCAACTAAGCAGCTTTTA 15409 28 100.0 32 ............................ TTACGAGTTAAACGAAAAGTGTAACCAATACC 15469 28 100.0 32 ............................ TATAAAGTAAGGGGTATAGGGGTATTGTACTA 15529 28 100.0 32 ............................ GTTGAAGTATTACAACCCCATGGATAATATGT 15589 28 100.0 32 ............................ ATTCCCATCAATTCATATGAATCAATACTAAA 15649 28 100.0 32 ............................ TATAACGCTATGTTATGCGCTGATATTTTTGA 15709 28 100.0 32 ............................ TTCAGTAGCCAATAGAATAGGACCATCAGTAT 15769 28 100.0 32 ............................ AGTACAATCCTGAATAGACTGTGCAGTTGCTT 15829 28 100.0 32 ............................ AAGAGCTGCATAATATATACCCCAAATCATAA 15889 28 100.0 32 ............................ GTTAGGTGTGAAGATACGGTTAACCTCGGCGA 15949 28 100.0 32 ............................ ATTGAGCTTTATGCGGGGCAACATCAATCAGC 16009 28 100.0 32 ............................ TTTCCGGTTGCTGCTATCTTTTTTTGCATATG 16069 28 100.0 32 ............................ TTGTCCTTTTGTAACACCTCCGGTAGCTGTCG 16129 28 100.0 32 ............................ ATTATGAGCAACTAGAAAAATTTAAACCTGAA 16189 28 96.4 32 A........................... GTTTAGCGCAGCGTACCGCGACCACATCTAAA 16249 28 100.0 32 ............................ TAACCTCAAAAGTTCATCCCTAGTAAATTTGT 16309 28 100.0 32 ............................ GTTAGATATATTTCGCAATGCATGAATTACGT 16369 28 100.0 32 ............................ TCGCAGTAAATTGTTTTTCGAGTACAGCGATA 16429 28 100.0 32 ............................ GCTTAATTGCGGTTTTTATTGCGTGAAATAAA 16489 28 100.0 32 ............................ ATACGACAAATTAAGGGATATTATTCAAAACA 16549 28 100.0 32 ............................ TCATACGTTATTAAAGAATTATTGTTTTGAAT 16609 28 100.0 32 ............................ TACATCAGATAATCCTGATGCCTTTTTGTGTG 16669 28 100.0 32 ............................ GTTTACTTTGTCAAAGAATTGTATTCCTGACT 16729 28 100.0 32 ............................ TGCAGTTTTAGCCATGCTAGTAGTCCTCATTA 16789 28 100.0 32 ............................ TCCATCAGACTCAACGTAATAACCTAACCTTT 16849 28 100.0 32 ............................ ATAATGACCTTCTTTACGACACGGTTCGGGTA 16909 28 100.0 32 ............................ AAAAGCAGGTAATTATGGCGTTTGGCGGGTTA 16969 28 100.0 32 ............................ AATCCTAATCGGCATCGTAGGTGCTTGTGTCG 17029 28 100.0 32 ............................ TCTATCGTCGTACCGGTGGCAAATATATTCTC 17089 28 100.0 32 ............................ TGGGACGTGCTTGCCAATAACTACCTGTTACC 17149 28 100.0 32 ............................ ATTCATGGTTTAAGTGGCATTTAATCACCTCA 17209 28 100.0 32 ............................ TAAATTCACATTGGGGAATAGTTCGCCGTATT 17269 28 100.0 32 ............................ TAGAGTACAAGACCGCAGCGTCAACAGCTTAC 17329 28 100.0 32 ............................ ATTAACGCCACTCTTAGTGCTCTAGCCGCCGT 17389 28 100.0 32 ............................ TTCTAGGTTTGATTGAGTAACACCTAAGTCGG 17449 28 100.0 32 ............................ TGTATCCATACGTTTAGACGTAATGATAGCGT 17509 28 100.0 32 ............................ ATTTAAGTACGCTCGGTTTAATTCACGCTTAG 17569 28 100.0 32 ............................ AGTTGCTCGGTGTTTGTGTATCAAAGTTAACA 17629 28 100.0 32 ............................ TGCTAATGACGCTGACCCGTACGTTTTTGGTG 17689 28 100.0 32 ............................ ACAAACACTGGCAACAATCGCTCAATTGAATT 17749 28 100.0 32 ............................ TCTAAAGTCGAAGCAACACGCGATTCGTTACA 17809 28 100.0 32 ............................ GTCGAGCGTTGGAGGTGGTATGTTCTTCATTA 17869 28 100.0 32 ............................ ATCGACGTAAACAAGGCAATTAAGCCCGCTGA 17929 28 100.0 32 ............................ GTATGTTTGCGTACGAACTGAACGACGAAAAC 17989 28 100.0 32 ............................ ATTACGACATGGTTTCGACGAGAATCGTTGGT 18049 28 100.0 32 ............................ ACCAGTCTATAACCTCCTGAGAGTGCTTCTCT 18109 28 100.0 32 ............................ TTCTGCAAATACCATTTCAAAAGGAGACCAAC 18169 28 100.0 32 ............................ AAATGCAGGAACTTGCATAAATAAAGCTATAG 18229 28 100.0 32 ............................ TTAATCGCGGTCACTTTACAATTGATTGGAAA 18289 28 100.0 32 ............................ TACAGTTACATCCTGATTTTCAAGGACCATCT 18349 28 100.0 32 ............................ AACAATAGTTTTTGCAAGGTGATAACCCTCAA 18409 28 100.0 32 ............................ GCAAGAGGAACTTGTTTGGGCTATGGCTTGCG 18469 28 100.0 32 ............................ TTATCATCACATGTCTGAGTTCGAGCCAAACT 18529 28 100.0 32 ............................ TTTTAATGCAATGTGACCAAACGCGTTTTGAC 18589 28 100.0 32 ............................ AATCGCGTTAGTAGCGGTTACAACGCATCGCA 18649 28 100.0 32 ............................ TAATGATATTAATGCAGAGCAAGTGTGTGAAG 18709 28 100.0 32 ............................ TGTTTAGCAGGTGCGCTTGTGTCACCTGGATA 18769 28 100.0 32 ............................ AACTAGCAACCATAGCATTCCAATAAGTTAAT 18829 28 100.0 32 ............................ TTGCATGATGATATCACCATCGCTGTCAACAT 18889 28 100.0 32 ............................ GCGCCCTTGGACATACCCGCGCACAAACAATT 18949 28 100.0 32 ............................ ATTGATAAGAAAGTCAATCGACTTACTAACAT 19009 28 100.0 32 ............................ TGTAGCGGTTTTATTGTATCGTCATTTGAAAG 19069 28 100.0 32 ............................ TCAACATCAGGCATTGGAGCTAAGCTTGGCGC 19129 28 100.0 32 ............................ ACCCTCGCCGCCAGTGTCTCTTGTGCCATCTC 19189 28 100.0 32 ............................ ATCTTAAAAGTGTCGAGGTCGTCAACTAACTT 19249 28 100.0 32 ............................ ATAACCCAGATAGCAACTTGACCAAACTTATC 19309 28 100.0 32 ............................ TCTTTGCTTTCGTAGTTTCCGCCCATGTATTC 19369 28 100.0 32 ............................ GCAAAAGCGTTACACGTTTACCGCTTTCTAAG 19429 28 100.0 32 ............................ ATAACGCTATTACGGTTTTGAACAAACTCACG 19489 28 100.0 32 ............................ TAACGCTGTCAACTCTTGTTCATTAATCATAA 19549 28 100.0 32 ............................ TGACACTTCCATTATAGTAACATCATGGCTCA 19609 28 100.0 32 ............................ TGAACAGGGCGGCGTTAACGCTTTTAAATCAA 19669 28 100.0 32 ............................ TCACCGCTAATGCGATTAACTTCAATAGATGC 19729 28 100.0 32 ............................ TATTTGTTTTGCGTAATTGCTTAAGCCTTCAC 19789 28 96.4 32 ........T................... AATCAGCTTGCTTGAACTTAACTTGCTCCTTT 19849 28 100.0 32 ............................ TTTGTAAACCTTAAATTAAGAACGCCGTCACA 19909 28 100.0 32 ............................ CCTTTAATGTAATCAATTAACGCTAACATTTC 19969 28 100.0 32 ............................ ACTGGGGAGTTGATGCTACGAACCTATGAAAC 20029 28 100.0 32 ............................ TTTTGAGCGCACACGAGTTGCGGTAACTTTGT 20089 28 100.0 32 ............................ AGCTTGAAACTGTGAAGCTGCGCTATTTAATT 20149 28 100.0 32 ............................ TGATACAGCGCTTGCAACAGCTTCGGCAGCCT 20209 28 100.0 32 ............................ TTTATATGAATATCAACAACCAGAACATATTT 20269 28 100.0 32 ............................ GAATGCGGTAGTTAGAGAGTATGAGAGTTATT 20329 28 100.0 32 ............................ GACAAGAAATAAAAGCCTAAACTACAAATAGA 20389 28 100.0 32 ............................ ACTAAACCGTGGTCCGTCTGTGTAATGTTAAA 20449 28 100.0 32 ............................ TATACATTCTATTTTGTGCTTTTCACCCGCCC 20509 28 100.0 32 ............................ CTTTTAGACCTTACCCCGATGTAGGTGGTGAG 20569 28 100.0 32 ............................ ATTCTTCGGTTTGTTCAATTGCTTTTTCTTCA 20629 28 100.0 32 ............................ GTCAAAAGCTCAAACAGGTTCTATTAGTATGC 20689 28 100.0 32 ............................ TAACAACACTCTTGTTCTTGGTCATACAGAGT 20749 28 100.0 32 ............................ GTTAGTGACATGATCATGCTTTCAACATTTTT 20809 28 100.0 32 ............................ ACATCGTGCAACTTGAATCGACTTACTATTTT 20869 28 100.0 32 ............................ TTTGTCACTGTCACCAGCTGCGGTTCTGGAAC 20929 28 100.0 32 ............................ TTTAAGGCTGGCTCACCTATTGCACAATCATC 20989 28 100.0 32 ............................ GCTAGGTGAAACAGTGCTAATTGAGACTGATT 21049 28 100.0 33 ............................ GATAAAAAACCGCTGGCTTATTAGCCTTTTAAT 21110 28 100.0 32 ............................ TTATATCAAAGAGGGGATTACTGACACGACAA 21170 28 100.0 32 ............................ CTTTATGCGGAATCTGATTCATTCTACTTGCT 21230 28 100.0 32 ............................ AGCTAAAGGTGATAAACCTGCACGCACTGTTT 21290 28 100.0 33 ............................ TTGAGACTTGGATACACTTGTTTTGCTCTTTTT 21351 28 100.0 33 ............................ TTGAGACTTGGATACACTTGTTTTGCTCTTTTT 21412 28 100.0 33 ............................ TTGAGACTTGGATACACTTGTTTTGCTCTTTTT 21473 28 100.0 33 ............................ TTGAGACTTGGATACACTTGTTTTGCTCTTTTT 21534 28 100.0 32 ............................ TCGGCAATGAGTATGGTAATGTCTCAACTGGT 21594 28 100.0 32 ............................ CATCGGCATAAACCCACTTACTCAGTTCGTTA 21654 28 100.0 32 ............................ ACATACTATAATAGTGGACTCTAGTCCCATTT 21714 28 92.9 32 ................A.......A... TTGAACATCACGCGAAAACCTGACTTGAGCTA 21774 28 100.0 32 ............................ TCGTAGATGCCGTGGCATTTTATGCAAGTGCG 21834 28 92.9 0 ...........T.........C...... | ========== ====== ====== ====== ============================ ================================= ================== 113 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACAGTTTAATAAATGAGATCATAGGAGGTAAATTATGTCACTATCTACTCACATTAAATTAATCAGTTCACTCAAAGAGCGAATAAAGATTTAGAGGTGATTTACTCACATTATATAAACCGATTAAGTAATTAGTTTATTGATAAATTATTTAAAATAGAAGAAGTGGTAAATTTATTGGCGACATGGTCTCTGTTAATGCGAGTACCTAAAAAGCCAGCATCGAGTAATACAGATAGCTCAGTCTTGCTTATCAGATAGGAAATACAAATATTTATATCATGATAATCTTACATCAAAAGCAACGAGTTACAAAAGCCGCTACGGCGCGTTTACTAAAGTATTAGAGAAGGATAAATATATTATATTTGACCTAAAAAACAGCTCTTTAAAATTATGTAATATAAACAACAAGTTAAAAGTGCGTTCAAAATAAAGGTAAAATATTTATTTTTATAGTAACTCATTGTTGTAACTTGTTTTTTTGCTGTTACTCTATT # Right flank : AAGTAGGGGTGTAATTTAACCAATTGTAGAAGAGATAAACATTGATGTATTAAAGTAGGGCAACGGTTAATTATGCGCCTTGCTTAAACTATAGTAATACTATTAGTGACACTAAGTAGGACTCTAATTTTTTAACGTTACCCAAAATTATAGCTCACACAATAATTCAGGTTAACTCGCACAAGAACATGGTTTAAAGCAGCAATGTCATACGACACTGCCGCTCAGTAATAATGATCGTGATAGTATTAAACGAACACTTTTATTTTTTTACCTTACCTTTAAGAACGTAGATTTCACCATCAAAACTGCCTTGAATAGTCAGCCCTTGGCTCGCCAATTCTTGTAAATATTCAATATGATCTGTAGTGATATGCTGACCCGGTACCAAAAGCGGAATGCCTGGTGGATATGGGGTGACTAAACCTGCGCAAATACGGTTGTTGCTTTTGCTGATTGGCACAGATTCGCGATCGCCATAAAAAGCGTCGCTTGGAATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //