Array 1 153859-152061 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAU01000035.1 Stappia sp. TSB10P1A, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 153858 29 100.0 32 ............................. GGGGCACAGAGGGCGCAGGAAGTACCTTTCCC 153797 29 100.0 32 ............................. ATAGAGCTTGCGAGCGAAGCCCGTGGTCGGCA 153736 29 100.0 32 ............................. GCAGCACATTTGCGCAAGGTGCTGGGGCGCGA 153675 29 100.0 32 ............................. GCCCTGGTAGTACTGCTCGTATGAGTGCGACG 153614 29 100.0 32 ............................. AGGGAAGAGGACGACTTTCTCATTCTCTACAA 153553 29 100.0 32 ............................. AAGAGAGTATGGCGCGCGCGGTCATGACGCGG 153492 29 100.0 32 ............................. CGGGGCAGGTATTCAGGAATCCTCTTGACTGC 153431 29 100.0 32 ............................. TGCTGGAGAGCGGCGAGCAGGGTATCGTGCGC 153370 29 100.0 32 ............................. TGGCGGCATTCCAGCTCGACCTGGCGCAGGCG 153309 29 100.0 32 ............................. GCGGCGGCGCTGCAAAAGAAGATCCGCGACAA 153248 29 100.0 32 ............................. GGGTCGATGTCGTAGAGCCGCGCCAGCCGCAG 153187 29 100.0 32 ............................. CCGAGATTGCTGCACATCGAAGCGATCCTGAA 153126 29 100.0 32 ............................. TACTTATCATCGGCGCGCTGCGGAGACATCAA 153065 29 100.0 32 ............................. CACTTCGTACCGCGCCGGGCCGTAGCCAATCG 153004 29 100.0 32 ............................. TGGACCCAAGTGACCCCGTAAAGATATGGATG 152943 29 100.0 32 ............................. GGCGAGGTGCTGTATGGCACGGCAGACGAGCG 152882 29 100.0 32 ............................. ACGGAAAAGAAAGTTGGATTTCCGCCATCCGC 152821 29 100.0 32 ............................. GCCGACCAAGCGGGACAAGAGGCTGGACTCCT 152760 29 96.6 32 ............................T CACGCTGGGCAGGTCCGATCTAAGATCCTTGG 152699 29 100.0 32 ............................. CACGCCCAAGCCGCTAAAGATCCTGCGGGAGA 152638 29 100.0 32 ............................. TATCCAGACCACCATAGGCACTGGCTCAGGGC 152577 29 100.0 32 ............................. ATCGCCCGAGGCGCCCGGGGCGGCCCGCGGCG 152516 29 100.0 32 ............................. GAAGCGTGGCCGGCGGGCAAAGGAAGAAAAGG 152455 29 100.0 32 ............................. GACGTCATCAAGGCGCTCGATCGGCTGGCGAG 152394 29 100.0 32 ............................. CCATTTGGCGCCATTGCAGTCGCTGTAACAGC 152333 29 100.0 32 ............................. CGGAGACTGATCGAAGGTGAAGGACATTGTCA 152272 29 100.0 32 ............................. GATGCAGACCCAGTCCTCATGCGGAGGTGCCT 152211 29 96.6 32 ............................G GCGTATCCGTGGTATACGATCCGGAACACACA 152150 29 100.0 32 ............................. GGCCCGGCGATGATGCTGACCACCTCGCCGAT 152089 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.7 32 GGTTCCCCCACACGCGTGGGGATAGGCCC # Left flank : GTCGAGCGGCTGACCCGGCGGCGTGCGGCGCTGCTGTTTCGCCAGCGCTCGGTCATTCCCTCGATGATCGACCGTATCAAGTCGCTGATCGGCCCCGGCGAGGAGACCGACACGGAGGCGCCCGCCTGATGCCGATGGTGGTTGTGATCACCCGCGATGTCGAGGGGCGCTACCGGGGGTTTCTCGGTTCGGCGATGCTGGAACTGTCGGCCGGTGTCTATGCCCATCCGCGCATGAGCGCGGGGGTGCGCACGCGGATCTGGGATGTGCTGCGCGACTGGCACGGCCAGTTGCGGCGTGGCAGCATCGTCATGACATGGGTGGACAGCTCCGCCAATGGCGGCCTCGGCCTGCTGGCGCTCGGCGAACCGCCGAAGGATATCGTGCCGCACGACGCCATGCTGCTGGTGCGCCGGCCCTTGCCGGAAATGAAGGGTTTTGACTGAACCCTCCATTGTTCTTTGACATTGTCGATAGGAATCAGCATCTTGGGCCCTAGG # Right flank : TGGTCATCGGGGTCGTGTGCCGAGAGTTCGGAAGGCACTTCGAACTCGGAGCCAGAACCACGACCGCGCGACCGGCCGGTCAGCCCCCCGGCTCCGCGCTTGCGCGCGGTCGAGGTCACGGCAAAAGGGATACGAGGCCTACCCTTTGCATTGGCCGTCATCCCGGCCGCGGGCGCAGCCGGAGAGCCGGCGGGGCCAATGCCGGCTCACGGTCTCACAACGACCAGGGGCCCAACGGCCTGCGTCCCGCCAGCATCATGACACAGCCCGGACATACAGGGACCCATTGGCACCCCCGGCAGGTGTTGCCCGCTCTGCCCTCTCCTTGCGTCTTCCCGGACGAGGCCGAAGGCCGACGATCCGGGACCGGGGAGCCACGGCGGTTGCGGTGTCTCTCGCGCGCCGTATGCTCTCGGCTTGCCGGTGCCGGGGCTCGCCGGTGCCGGGGCTCGCGATGCCGCCCGGAAGGACGCAGGGCAAGCGCAAGACTGCCCCCTGTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCACACGCGTGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 163511-162628 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAU01000035.1 Stappia sp. TSB10P1A, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 163510 29 100.0 32 ............................. CAGTCTCCCCCCTCGTCGTCGTCTTCGAAGTC 163449 29 100.0 32 ............................. CCCTATCGTCCTGCCCGATAGCAGCGGCTATG 163388 29 100.0 32 ............................. AGCAGCGACCCGCCGGCCGGCAGCGAGCGCAG 163327 29 100.0 32 ............................. AGAGACCCGATAGTAGTGGCCCTTGTTCCCAT 163266 29 100.0 32 ............................. GGCAAAATGCCCGACGATTCCGAAGAACGTAG 163205 29 100.0 32 ............................. TCGTCCAAGGCCTGCCGCAGCTTGCTCTGGAG 163144 29 100.0 32 ............................. GTGAAGCTTGAGGCGGCGAAAAAGCAGCTTCT 163083 29 100.0 32 ............................. GTCTGATGGGGGACGTGACAGCCGGGAGAGAC 163022 29 100.0 32 ............................. TCTGCGACCATTGGCGGCATCGCATACCTGCA 162961 29 100.0 32 ............................. CTACAAGCTGCGCGAGCCGGAATCGCTGCCGC 162900 29 96.6 32 ............................T CAGTGCGACACGCCCGCGTCCCGCCTTGATCT 162839 29 100.0 32 ............................. CGGCGGGTCCTTCTGCGCCGCCGACCAGCACG 162778 29 100.0 32 ............................. CCGTCCGAGGCAGGTCCCGAGCGCATGTGGGG 162717 29 100.0 32 ............................. GCCGACACGCTTTTCCTGACGGACAGCGCAAC 162656 29 93.1 0 .........................AT.. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.3 32 GGTTCCCCCACACGCGTGGGGATAGGCCC # Left flank : CGGCTGTTCGCCGAAGGCTATATCCGGGGCGTGCGCGCGATGATCGCCCCGGAGAAGGTCGAGCGCGGCTCCTTGGTGCTGGTCGGCGTGGTGCTGGACCGCTCGACGCCGGAGAGCTTCAGCGAATTCGAGGCGGCGGTGCGCAAGCTCGCCTTCGTCCTCGACTGCCATCTGGTCGCCGGCGATTTCGACTACATGCTGAAGATCCGCGTGCGCGACATGGCCGACTTCAACCGCCTGCACGGCGACAAGCTGATCGCCCTGCCCGGCACCCGCCAGACCCGCACCTTCTTCGTGATGAAGGAGGTGATCGACAACGCCCTGCTGGAGTTTTGAGGCGGCGCGGGACGTACCGGCACTGGCACGGCACGCGGCCAGCTTGACCCCGGCCGGAGCCCGCCGATAGACTTGCCGCGCGCGGGGCCTGCCCCTCGCTTTTCAAACCGGCCACCCGGTGTTCTTTGACACTGTCGAGGAAAGTCAACCTCTTGGGCCCTAGG # Right flank : TTGCCCGGTCGGCCGGCGGGCAATCAGGACAGGTCTGCTGTCTTGACGCAAGGGAGAAGACACTTCTACCCTGTCTTCAAAGTTGCACTGATATTTTTTCCATTAGGCGTTTCATGCCAGTAACCGACACTGACCTTGGCGAGCCCTGGGGCAAACTGCAAGACGGGGCTCGCCACCATCTCTTGCACCATTGCGCTGACGTTGCGGCCTGTTTCGACCTGCTGGTCCGCCTGCCGGTGGTGCGGGCGCGGCTGGAGCGCGCCGCGGCGCGAAAACTGACCGAGACCGATCTCAGCCGGCTTGCCGTGCTGGCCTTCCTGCATGACTGCGGCAAGCTGCATCCCGGCTTCCAGGCCAAGGGCTGGCCGCAAGGGATCTGGCATGCTGCCCTGCGCGGCCACTTGCGCGAAGGCGCGTCGATCTTCATGGCAAGGGACCGGCCGTTCCAGGGCCGCATGGCGGAGCACCTTTGCCTGGGCGAGTTGCTGGACTGGGGCGTC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCACACGCGTGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //