Array 1 17155-16273 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LHDP01000025.1 Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N43452 N43452_contig_25, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     17154	    29	 100.0	    32	.............................	TTGCAGGGCGATATTGTTGTTGGTGAATGGGA	
     17093	    29	 100.0	    32	.............................	CGTCGCGGAAAATTTCGCATTGACGATAAAGA	
     17032	    29	 100.0	    32	.............................	TTACGTGTTTATTCATCTGTTGCATTAGATTC	
     16971	    29	  96.6	    32	............................T	GAGGCGTACAGGCTGTTAGATGAGAAATTACC	
     16910	    29	 100.0	    32	.............................	CCGGCATCAGCGCCGATCCGTTCATAGTGCCC	
     16849	    29	 100.0	    32	.............................	CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT	
     16788	    29	 100.0	    32	.............................	CGGAGGATGGAATATTTCCGAGGCTGGCGATT	
     16727	    29	  96.6	    32	.............T...............	ATGCCGGAACGCTGATGGCGTTTGACATGAGC	
     16666	    29	 100.0	    32	.............................	AATTATTTCTGTGGCTGGGGTTTCGATTCGAT	
     16605	    29	 100.0	    32	.............................	TGACGCTGGTCTATACCGGCAACGAACGCGAC	
     16544	    29	 100.0	    32	.............................	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA	
     16483	    29	 100.0	    32	.............................	CAGGTTATGCGCAAAAATTAATTCATATTATA	
     16422	    29	  96.6	    32	.................A...........	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA	
     16361	    29	 100.0	    32	.............................	CGTTCATCGGCAGCGTCACGCAATATGAAGAT	
     16300	    28	  82.8	     0	...............A.AA.....G-...	|                               	
==========	======	======	======	=============================	================================	==================
        15	    29	  98.2	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CCAGCGGGGATAAACCGCCGCTGACGCACTGGATCAACCTGACGCAAC
# Right flank :  TTGCATAATCATAATCTGTGTACCAGTAATGGCAGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTCCCGGGGAGGCTTTTAGACAGGAGAAGGCCATGGCGTTAAGGATCAGGGTATTGCTCGAAAATCATAAGGGAGCTGGAGCGGATAAATCGTTGAAGGTCCGGCCAGGGTTAAGCCTGTTGGTCGAGGATGAGTCTACGTCTATCTTGTTCGATACCGGCCCTGATGGCAGTTTTATGCAAAACGCGTTGGCGATGGGGATCGACCTGTCCGATGTGTCTGCTGTGGTGCTTTCGCATGGTCATTACGATCATTGCGGCGGCGTGCCGTGGCTTCCTGATAACAGTCGAATCATCTGCCATCCCGATATTGCGCGCGAACGTTATGCGGCAATGACTTTTCTCGGTATTACCCGAAAAATAAAAAAATTGTCGTGTGAGGTAGACTATTCACGCTACCGAATGATGTACACGCGTGACCCCCTGCCGATTGGC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [63.3-30.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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