Array 1 1306176-1304434 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021964.1 Limosilactobacillus fermentum strain CBA7106 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 1306175 29 96.6 32 ............................C TGGTGGTTGGCCCGGCTGTGGCGGTTGTGGTT 1306114 29 100.0 36 ............................. GTTCTGGTTGTGACATTGATAAATTTCTCCTGTATT 1306049 29 96.6 32 ............................C GAATGTCAATTCCTTGCAGGGAACTGTGACCA 1305988 29 100.0 32 ............................. TAAGGTCAGAGATCATTTGCTTAGTCGTGCCC 1305927 29 96.6 32 ............................C ACAATTGAACCAGATCAGACTGCTACTGTGGT 1305866 29 100.0 32 ............................. AGGAGGAAAAATCATGGAAGTAAATTCAATCG 1305805 29 96.6 32 ............................C CAGAGAATTGAATAAAGCCCATACCTTGCTTG 1305744 29 100.0 32 ............................. GAAATTGCTACGTTTACAGTTGAAACTACTTG 1305683 29 96.6 32 ............................C ATTCCACGAGGCCCTAAAGGCGACAAAGGTGA 1305622 29 96.6 32 ............C................ ATTGAATGCGTTCAAAATTAAGTTGGGAGTGC 1305561 29 100.0 32 ............................. TCCCTTCTCAAGACCCCAGACCACGTCTGTGA 1305500 29 100.0 32 ............................. GTTACAGGATCAAATGTCGATGCTACAGGATC 1305439 29 100.0 32 ............................. CAGTTCTTCCTCATCGGTCTTGACGATCGTCT 1305378 29 100.0 32 ............................. CAGTTCTTCCTCATCGGTCTTGACGATCGTCT 1305317 29 96.6 32 ............................G ACGGTCGTCTTGGCGTCAAGAACTAACTTGTT 1305256 29 96.6 32 ............................C CAGTCACGGAGGCAACTACGATTGACCACGTC 1305195 29 96.6 32 ............................G GCAAACCAGGAACTAAAGGAACTTAAAGACAA 1305134 29 100.0 32 ............................. GAAATGGCGACCCGGATCACGATTGATACAGT 1305073 29 96.6 32 ............................C AACGTCAATCCAACAACGGCAACAGCTACTTG 1305012 29 96.6 32 ............................C GGCACACCGATATCGAAGAACGTGATGGATTT 1304951 29 100.0 32 ............................. TAACGCGGAAAATGAGAAGCACCGTATAACTG 1304890 29 100.0 32 ............................. GACACAGTTGGGAAGCTGTTAATCGTGTCCGT 1304829 29 100.0 32 ............................. GCTAATTCGTCACGATCATTAGCTGACGTACC 1304768 29 96.6 32 ............................C CACTCTCATTCTTAATTGAGATAGTGATGTCC 1304707 29 100.0 32 ............................. TATCTCCCCATGTTTTAGAAGCTAAACGGATA 1304646 29 100.0 33 ............................. CACTACGCTTCTAAGATCGGTGTCTTGGAAGCA 1304584 29 100.0 32 ............................. TGTAATCCGGCAATCGTCTGATCTTGTGAATT 1304523 29 100.0 32 ............................. CTAGGCCGGCTGTTTTCGACCGCTAACGTCAA 1304462 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ==================================== ================== 29 29 98.6 32 GTGCTCCCCATGTATATGGGGGTGATCCT # Left flank : GCGACTGACGAAATAATATCGATAGGGGCAGTTAAGTCAACCAAGGGGAGAGGGCTTGAACGATTTTATCGGATCGTCAGAACTAGCAAGCAAATTCCTCCTAAAATTGTTAAATTAACGGGACTTAACCAACGAAAGGTTAATCAAGAAGGAATTAGCTTAGAAGCTGCCCTTACGGATTTCAAAGATTTTATTGGGCACGCAATAGTGGTTGGTTATAATGTTGCATTTGACTGGGAATTTATCGAACGAGGGTATGATAAAATAGGACAAGATCGCTTAAGTAATCGAATTATTGATTTACTTAAAGTGGTTAGGCAAAAGGAAGTTTTTTTGGATAATTTTCGCTTTGAAACGGTTCTAAAATACTACCAAATTGAGAATCAGGATCAACATAATTCACTAGCGGACGCCGAGGCATCGATCAAGCTCATGACCAAACTGATTGAAAAAGGGTTTTTGAAGATTTGAAAATCGCTTGGTTACAGGGATCTTTTAAT # Right flank : TCGTTGCCGATAAGTTGAACATGTCGCAGGCGGTACTGTACCCTGTCAAGTTGACACATTAAATAATAAAAACTAGTTGGCCTTGCCGAAGCGGTATTCTGCTGCGGTAAGGTCATTTCTTTTGCCTGAAATAAAGGAATGCGTAAAGTAATCGATACCTTCTGTCACCAGCTGTTCTAAGTCTTCAAACGTTTGTGGTTGTGGTGAGTGTGCTAACCAGATAGATTTAAAATCAGCCCATCAGTGCTCCATTACCGCATTATCAGCTGGTGTTCCTGGGGCTGAGTAACTATGTTGGCTGTTATTACTAGCCAAGTAGTGGTTGAATGCTTTGGAAGTATATGCTGCTCCGCGATCAGTGTGGATTAGCGGTGCCAGACCTCCGGCTTTCTGCTTGGCCATTTGAAATACTTTAATAGCCCCAGTACTCGTTTCTGTAGGCGTAATAATCCAGCTAAGTGGGTATTGACCGTATAGATCCAGGACAACGTGTAGACGGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCATGTATATGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //