Array 1 25745-25517 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JHZK01000039.1 Afifella pfennigii DSM 17143 Q331DRAFT_scaffold00039.39_C, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	================================	=================================	==================
     25744	    32	 100.0	    33	................................	ATGCTCGACCAGCTTCGCCTCCGCCGCGGCGAT	
     25679	    32	 100.0	    33	................................	TTCTACAACTGGACGAGCGCCATTCAGCAATCG	
     25614	    32	  96.9	    32	......A.........................	CCGTGTGTCGCCCGGCCGCGTGCCGCCGCACC 	
     25550	    32	 100.0	     0	................................	|                                	C,G [25519,25531]
==========	======	======	======	================================	=================================	==================
         4	    32	  99.2	    33	GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC	                                 	       

# Left flank :   T
# Right flank :  CCGATAGCGCCCAGATCCCTCACCGGCAGCGCGTTGTCTGGCCCTTCCTGCGATCAACGCGTTTCGCCGCTGGCTGACAGCAGACGAGTGTGCGTCGGGCACCACCCGACCGGCTTGGATCCTGTCTCACGGAAGTGTATGCTCCGCGCAGAGCATCGGACGGGAATTTATTGTATTTTAATAGGTTACCGGCTTCTCTTGGAATCCAGGTTCCCCAGCCATCGCGCCCTAGGCGATTGATTTTTCAAGGTGTGATTCTGAGCCAACAGGCCGATTCGACGAATCGCCCCGCCCTCCGGCGCGATGCAACGCGGGGCGTGGCGCGTCTCAAGCAGGGCTTTGGTATCGCTCGCCATCCGACGGCCGGGAAAGCAGCGCCCCGGTGACCCACCTCATCCGCTTCGACCACGGCCCCTTGCGCGGCGGCACGCTGTTCAGCGAGCCGATCACGGTGATCCGTGCCGACAATGCCGCGGAGGTCGCGCCCGCGCTAACAGCCC

# Questionable array : NO	 Score: 5.82
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-10.20,-9.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [33.3-1.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.64,4.91   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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