Array 1 29966-29009 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGLI010000377.1 Actinomadura bangladeshensis strain SID10258 contig-39000011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 29965 30 100.0 33 .............................. ATGCCGCCTGGCTGGCCGATGGGCCTGGTGGCG 29902 30 100.0 37 .............................. TCAGGACCCGGCAGGAACGCACGAAGACGGCCGTGCA 29835 30 100.0 35 .............................. ATGCCGCGGGTCTTGGCCCAGGCGCGGATGGCCTG 29770 30 100.0 38 .............................. CGGGATGGATGCTCGTGTTCATCGTGCTCAGCGCCCTG 29702 30 100.0 34 .............................. TAGGTGGCGGGCCCGGCGATCTCCTCCCACTGGC 29638 30 100.0 37 .............................. CGGCAGGTGCACGTCTCGGCGTCCGCGCTCCACGCGA 29571 30 100.0 36 .............................. GCCGGACCCGGCGGCACCCCCGGCATTTGCCGGTGG 29505 30 100.0 36 .............................. TTCAATCTGCGCGCCGGTCCCGCACGGGCCGGTGCC 29439 30 96.7 34 .............T................ ACGGCGGTGTTGCTGGCGTCGGTCACGTCTAGCA 29375 30 100.0 35 .............................. AGGCCGAGATGGTTGCGGCCGGGCCCACGGCGCCG 29310 30 100.0 37 .............................. TCATTTGTGGTGGGACGCGACGGGACCGGCGTGTCCG 29243 30 100.0 37 .............................. CGCACGTCGTAGGCGACGGGCGGGCACCCGGTTTCGC 29176 30 96.7 39 ......G....................... CCGCCGCCGAGGAGGCCGACACGGCGGGCGCGGAGGCCG 29107 30 100.0 39 .............................. GCTGGGACCATCTCCCACAACTCCTGGCCGAAGCCGGTC 29038 30 80.0 0 ...............A.........CGGTG | ========== ====== ====== ====== ============================== ======================================= ================== 15 30 98.2 36 GTCCTCATCGCCCCTGCGAGGGTTCGCAAC # Left flank : | # Right flank : GCTAGGTAGGCGCCATGCGGGACACGGCGCAACGCAACCATGTGCGTGGCGAACTGTTTGTCGTCCGAGGGCCAAGATCGACGGTGGAAACGTAAACAGGCTATACATCTGCTGCACGTTCAGCAGTCCGCGCCGGGGCCGTGCTGATCGTATGCGCAAGGGCTTCGCTGGGGCGAGGGTGGAGAAGGTCGCCGCCGACCTGGGCCATGTCTGATCCGCCCCGTCCTCGACGTCGGCCAGCTTGCGCCCGACGGCTGAATCTAGCGAATCGGTTTGGACGAGTGAGCGACCCGACGACCGACAGCAAGTCCACCTATTGTCACGCGGAGGCCTCCAGCGGCAGGGGAAGTATCAAGACGTCGAACATGGGAGCGTCGGGCCAGTTGGGACGCAGTTGCGCAACCCGCTCCCAGCCCCAGGACGAGTAGGCGCGATACGCCGTGGCGTTGTCGGCTTCTACCAGGAGGGTCGCCCGTTTCTCCGATCGCCCGCCCAGCAAG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.40,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //