Array 1 1329325-1327507 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045143.1 Schleiferilactobacillus harbinensis strain M1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1329324 36 100.0 30 .................................... TTTGGTTAGTGCTACTCGCAATTCGTCTGT 1329258 36 100.0 30 .................................... ACAAACAGATAGCACACCAACGCCAACGGC 1329192 36 100.0 30 .................................... CCAACTTTCTTGACCCCGAAGAATCCTAAA 1329126 36 100.0 30 .................................... AGCCAAGTCGGACTTAAAGAATGCGCAGAG 1329060 36 100.0 30 .................................... ATCCAAAGCGTTCAGGCTATCAGTCCGAAA 1328994 36 100.0 30 .................................... AATCTGGGCGTCCGTTCAACGAAAAGACAT 1328928 36 100.0 30 .................................... CAGCGAGACATGGAGTACTGGAACATTGAG 1328862 36 100.0 30 .................................... GCAGCCTAGCGTTGGATCCCCACGAATTAC 1328796 36 100.0 30 .................................... AAACTACATGGCGCATTTTTCCGGGCGCTA 1328730 36 100.0 30 .................................... TTGCGTTTTGGTCGCCGTCAAATTCAAACA 1328664 36 100.0 30 .................................... TCCTGGCTGGGCGTATAGCTCTGATCAGAG 1328598 36 100.0 30 .................................... AAGCCACACCACGTACACATCTTTGGTCGA 1328532 36 100.0 30 .................................... CAATGCAACAATTAACTGTGACACGACAAT 1328466 36 100.0 30 .................................... GGGAAGTAGCTTATCAGAATTACGTAATCT 1328400 36 100.0 30 .................................... GCAGGCGCTGGCGCCCTATAAAAAATACCG 1328334 36 100.0 30 .................................... GGAACGAAAGTTATGGGCTTTGAGCTAGTG 1328268 36 100.0 30 .................................... CGGGGTCAGCCAGTTAGTCAGCGCGATACT 1328202 36 100.0 30 .................................... GCACAATGCCGATTATGTCGAGGTGAGGGG 1328136 36 100.0 30 .................................... ACAGCATGGCAACGCCGTTGTCTGTGACAT 1328070 36 100.0 30 .................................... AACGGCCAGCGAAGGCGTCACCACCGTGTA 1328004 36 100.0 30 .................................... GGTCAGCCCAAGGTGGTTGTTTGGTCTTTT 1327938 36 100.0 30 .................................... AATGACGGCGTACGACAAGGAGGTCAACCA 1327872 36 100.0 30 .................................... GACGATTCTACCCGAGGTGGGGAGGATAAC 1327806 36 100.0 30 .................................... TGGGCAGTCGGTGATGTGAGTGGCGGCGGG 1327740 36 100.0 30 .................................... CAAACAGTCGCTCACTGACAAGATGCTAGG 1327674 36 97.2 30 ....................A............... CAGCCAACGGCTCACCGCCCGAGACAATGC 1327608 36 100.0 30 .................................... CATCAAGATCATGCCCAACGCTAAGGAAAT 1327542 36 94.4 0 .......................G.........G.. | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.7 30 GTCCCATTTTAGCCGATTCTGGAAGGATCCAATAGC # Left flank : CAACTTGCGCAGATAATCCTGGGGAGGTCTCGACACGCACTGTTGCCCGTTTGGTTTCCCTCTGGCGAATTGTGCGGCAGTAATCTCGCAGGATGCTTTGCCCACCTCGGTAGTCGTGTTCTTTGATGAAATGATAGATGGCGGAAGCGGAGCAGCCGGCTTCGACCTTCTCTCGGATGAGCCCTTTGAACGGATCTAATTTACTGGGCCGTTTCAGTTTTTCTGGTGGCTTGGCAGCTGGGTTGAGGCTTTGTTCGTAGTATCGTTTGACCGTTCGTGGGTCGGTATCGAATCGCCGGGCAATCTCGGCAAAGTTAGGCTTAATTTTATTCATCAGGTGCTGGTGGACGCAGTGCTCAACATCTAAACGCATATGGGATTCCTCCAAATTCAGTATGCGTTTAAGTGTACTAAAAAATGCAGGAAATCCGACATTTCTTAATCGGCAATTTCCTACATTTTACCGCCGGCGTTAACATTTAGTGATCCAATACCCGCCG # Right flank : TATTGCTGTGCTGATTTTGAGAATGATTAACGTTGGCGATGAGTGCGGGCAAGGAGCAGCGAGATGACTGCTTGTGCCGCACAGAAAAAGTGGCAGCCGGATCAGCGCGCACGGAAATTTTCGAGGGTTGAAATTTTGCGGCGAGATTTTTGAAATGAAAACGACAAAATTTATTTTCAGAAAGAGCAAATTAATTGCAAGAAACTGATATGCCAGATTTCTGTGACGGTTGCTGCTACTTGCGATGTATCTGATCCAATGACGCCCATGGCACACCATAATTTGCAACGTTGATATTTTCTTGCAAAATTCGATTTGCTTCCGCGTTGCTTTTCTGCTTTTCTGGTGTATTGTTTTCATAATACAAACACTGCGTAACAAACAACAAAAAACCAACCGTTGCTGTAATCGCAATACCTGCCAGCATATAATCATTCATCCAAATCACTCTTTTCCTAGACGCGCGGGCACGCCGCGTATTATTTCAATACTGTATTTCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCATTTTAGCCGATTCTGGAAGGATCCAATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.70,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 1331579-1332801 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045143.1 Schleiferilactobacillus harbinensis strain M1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1331579 36 100.0 30 .................................... ATACAGACAGATTGTATGTGGGACTAAGCA 1331645 36 100.0 30 .................................... GCAGACATCTTCTCGCCACCACGTGCCAAT 1331711 36 100.0 30 .................................... ACCCGCCCAGCCGATGTTCACCGACCGGAC 1331777 36 100.0 30 .................................... CTTTGTAATGTAATGATGCATGATTGTTAC 1331843 36 100.0 30 .................................... TACATAGCCATCCCTTTAAGGTAATGCGTG 1331909 36 100.0 30 .................................... ACTCTTGAAAATCGTTGTGTTACCCGCATC 1331975 36 100.0 30 .................................... TGCGTGGTCGTGCAAGTTCTACGTCGGTAA 1332041 36 100.0 29 .................................... TACAGAATCAAGATGATCAGGGTATTGTT 1332106 36 100.0 30 .................................... ATTGCCCGGAATATAGGCAAAACCTGTTGT 1332172 36 100.0 30 .................................... CAGATGCTCTACCATTGACGCTACGATTGC 1332238 36 100.0 30 .................................... TAAAGCCCACATCATTAAAAAGTACAGTGA 1332304 36 100.0 30 .................................... CCGCCAGTCTTAGCATTGACAATCAGCCGA 1332370 36 100.0 30 .................................... GGCGGAGCATTCTATCACAACCGCCGTCAC 1332436 36 100.0 30 .................................... GTCAGGCTGTTGCGTTTCTTGCCCAAAACA 1332502 36 100.0 30 .................................... GACCTGATTCGTCAGTGGCTTTGCCGTATG 1332568 36 100.0 30 .................................... GGCAGAGTTTTACAACTCATCAGCATGGCG 1332634 36 100.0 30 .................................... GCAATGGCCTGGTCAATGATGCTCGTCAGT 1332700 36 100.0 30 .................................... ATACCATGGGCTAGATCCCTAGCAGCAACA 1332766 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GCTATTGGATCCTTCCAGAATCGGCTAAAATGGGAC # Left flank : TGGGGACCTGGTTGAGCGGCTGCGCATTGCACACGACCAGCAGCGAGGCGAGGCAGCCTTGCGCCGGTATGCTCGGTATCAGGTATTGATCATCGACGAGATCGGGTATCTGCCCATTGATTCCATCGGAGCCAAGATGTTCTTCCAGCTTATCGAGCGCCGTTATGAACGGAAATCAACGATCATCACGACCAACATTGCCCTCTCCAAGTGGGGCGATACATTCGCCGACAAGACTCTGGCTAATGCCATTCTTGATCGACTGGTGCACCACTCCCGCGTGATTCGGATCAACGGCCGGTCATACCGCATGAAGGGCCATATCACAGAGCCCAAAGCGGACAAAGCACCGAATGATACTGGTTAGGCCTCTGGCCTAACTGAAGCATCACCACTAATTGGAAAGGAGAAACGCAGCTCAACTAAACCGGCAAAAAACAACATTTTCTAATCGGCAAAAAATGTCATTTTATCGTCGGCGTTGACACTAAACAACAATG # Right flank : CAGTCACAAGCAAAGAGGGCGTAACCTCGCAGTTTGCGCCCTCTTTGCTTGTCTATAAACTGGTCAGTGAGTCACCTGAGATGTTTGTTTCTTGCGGACTGACGTCTCCAACCAATACTTTCATATGCGCAAATTGCTTTTCTGTCAAAACTAGGGAACGGACTTGTCCTTTCTCTGGCAAGTAGCCCTCAAGTCGTTTTTCGTATTTTGTAGCCATGTCTAGGCCATTAACGATCCGATAATAGACCGAATACTGCATCATGACGAATCCCTCAGCGATAAGGTCATGACGGAATTGATTAGCTGCTTTTCGATCCGCAACTTCTACAACGGGCAAGTCAAACATTACGATCACTCGCATAAATCTAGGCGAATCCATGGGGGACCAAAGGAATCACTTGAGGGAGAATGACTCCAGATACTTTTTCCTGGGTAAAGGCTGTGCCGATACTTTCAATCGTCAAATGAATTGCGTTGCGTACCGTCTGGAACGAGCCGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTATTGGATCCTTCCAGAATCGGCTAAAATGGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.70,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //