Array 1 48155-50624 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSQM01000006.1 Dorea formicigenerans strain TF12-1 TF12-1.Scaf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 48155 36 100.0 30 .................................... AGACAAAAGCAAAAGCAGGACGGCATTATG 48221 36 100.0 30 .................................... TGTAGAAAAGGGTGAACGTCTTGTGACGGG 48287 36 100.0 30 .................................... AAAGCAACAGATGCAGGAAACAGCGAGGTA 48353 36 100.0 30 .................................... GATACTGTTTCCGCTGTGTCTACATAACAC 48419 36 100.0 31 .................................... ACTGAGCTTTGAAGTTGTAGGCGAAGAGTAC 48486 36 100.0 30 .................................... AGGTACTTTAAAAGAAGAAGTTTCAAGCGT 48552 36 100.0 30 .................................... CGCTGATATCGAAAGAACTTTAAAAGACAC 48618 36 100.0 30 .................................... GTTATTAAAGTGCAACTCCGCAAGTTGATT 48684 36 100.0 30 .................................... ACAGAGCAAATAGAGAAGCTGAACGAAGCA 48750 36 100.0 30 .................................... AATAGCGTCACCGTGTTCCTCCACGTCTGC 48816 36 100.0 30 .................................... AAAAAATAGAGTGCGTGGTATTATAATTAT 48882 36 100.0 29 .................................... GGTCTGCAAAATCCACAAACCCCCTATCA 48947 36 100.0 30 .................................... TGCATTTTCCATTTCCATTTATATGACAAC 49013 36 100.0 30 .................................... CAATGACTTCACCATCTTTATAAGCAACCT 49079 36 100.0 29 .................................... CGACCAAGTAAGCATTAATTCTCATGTGT 49144 36 100.0 30 .................................... CAGAAAACTTATGCAGAGCATATAGTTGAA 49210 36 100.0 30 .................................... AAATCCTTTTCCGTATTCAGTAGCCTTCCA 49276 36 100.0 30 .................................... GGATAGAGGATGGCTTGGTGATCGTGCAGC 49342 36 100.0 30 .................................... GTTGTAAATTTACTTAATATGTATGTTAGA 49408 36 100.0 30 .................................... CCGACCAAGTAAGCATTAACTCTCATACCA 49474 36 100.0 30 .................................... TTGGAGCGGAGCTGATGTGGCTTTATATGA 49540 36 100.0 30 .................................... AACACAAATATCTATAGATATGAATACAGT 49606 36 100.0 30 .................................... AAAGAAAGACATTATACTGTGATGCGTGTT 49672 36 100.0 29 .................................... TGACCTTCTGCTTGAATTACGATAGGTCG 49737 36 100.0 30 .................................... TATTGCGAACGAAGAAACATCTCCAACATT 49803 36 100.0 29 .................................... TAAATATATTCTGATGACGCAGAATACAA 49868 36 100.0 31 .................................... TCATGGCTCCATTATAACCGACCACTCTTCC 49935 36 100.0 30 .................................... CAATGTTGTGTGTAGATGTAAAGTAATAAG 50001 36 100.0 30 .................................... GCAGGACGTAGAGTTTGCGCAACAGCTAGG 50067 36 100.0 30 .................................... AAATGTATATGATTGTGCTTGTGGTGCTGG 50133 36 100.0 29 .................................... AAGAAATAATCTGCAAAACCATGGTAATT 50198 36 100.0 30 .................................... GAGAAGATTGCACAGGCAATGGAAGCAGCG 50264 35 97.2 30 ...................-................ AAACTTTGGCTGGAAATAAACTTCACAACC 50329 36 100.0 30 .................................... GAAATGCAAGACCATTGAGCAGACTGCCAT 50395 36 97.2 30 .........................A.......... GGTATGTTAAGCAATGAGACACTTTAACCT 50461 36 100.0 30 .................................... ACCGTGTAATTGATTGCAGCAATCATATTT 50527 32 88.9 30 ..........----...................... CGAAGTGGCAAAGCAGCTTTTAGACTATCT 50589 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 38 36 99.6 30 GTTTGAGAATGATGTAAAAATGTATGGTATTCAAAC # Left flank : AAGAATATTAAATAAACTATATTCAGAAATGAATGAGTTGGCAAAATCTGAAGAATTTTTTGTAAAAACGCAGGAAGTGATACAAGGAATTCAAAAATATCTGTTAGATTTAGAATATGCAACAGATTATATACTCACATTTGAGCAAGAGATTGAATTACCAGCATTGTTCAAGGCGGCTGGCTTAAGACATGAAGAAATTGAAGAAAATTATTTTGAACGGATAATACGATATGTAAAAATAGTAGTAAGCATACTGCATATTAGGGTATTAGTATTTGTGAATTTACGAAGCTATTTGACCGATGAACAGATACAGGAATTAATGGAAGAAGCACTTCGACAGCAAATATACGTAGTACTTGTGGAAAATTCTCAAAAAAATTGTATTGAAGGGGGAAAAAGGTATATTATAGATAAAGATATGTGTGAAATTTTATAAAAAGAGTTTGAATACCAATATTTTGCGCTAGTGATGGCGGTTCATTTTTAAATTTGAG # Right flank : CTTATGAGTTAAAAAGTACTTTGCACAATGAAATGATAAGACGAGGTATTTCCATGGACTTGAAGTATTGTAAATTAGAAATCTTTCTTCCGCCATCTCACCTGGAAGTCTTACAGAAAGCTCTCCAGGAGGTTGATGCGGGACACATCGGCAATTATGATTCCTGTATGTCGGTGAGCCCGGTAACTGGTTACTGGCGTCCGCTTGACGGCTGTAATCCATATATAGGGACGAACGGAGAAATCAGTTGTGAGCCGGAGCTGAAAGTAGAGGTCACAGTATACACAGAAAATGTTGATAAGACAATCGAAGTGGTAAAAGCAGTTCACCCGTATGAAGAGCCTGTTATTAATGTGATTCCACTTTGGAGGACAAGCTTTTAGTTATGGATATCATTGAACGGGATATTTATGCCCTGATTGTATCTGGTGATGGAATTAAAGCACGGGAGATTGCTAAGAAACTGAATAAAGACAGAAGCACAGTGAATCATTATCTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAAAATGTATGGTATTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //