Array 1 337186-338939 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFU010000003.1 Leuconostoc gelidum subsp. gelidum strain Ebr1-8 NODE_40_length_1151073_cov_45.742676, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 337186 36 100.0 30 .................................... TCTTTTTTGGGTCTACATTTTCTTGTTCTG 337252 36 100.0 30 .................................... ATAATCATCATCAAAATAGTCAAATCCGAT 337318 36 97.2 30 ...........T........................ TACTTAGATCAGTTTCAAGCAATCCGTCGT 337384 36 100.0 30 .................................... CGCGCTATCGCTCTGACGATTGATTACATG 337450 36 100.0 30 .................................... TGAACGGTTAGTTCGCACAGAAAGTACATA 337516 36 100.0 30 .................................... TGCATGGTCGATTAATAATGCAGTTGATGA 337582 36 100.0 30 .................................... TGCCCCAGCGGAAGCATTGTCTTTGACTGC 337648 36 100.0 30 .................................... CTTGGAATTACCCAGGACGTGTTTATATGG 337714 36 100.0 30 .................................... TTGTGTGAAATCGGTTGTCACACGTCTGTC 337780 36 100.0 30 .................................... CCTTCCATGATGATTTAGATCAGAATTTAA 337846 36 100.0 30 .................................... ATAATCCAGAGTTGTTAAAGCGTTTGAATG 337912 36 100.0 30 .................................... TATTCAACAAGTTGCTAATTTGGGAACAAG 337978 36 100.0 32 .................................... AAGTGACCAGTTCGAGATGTCGCGGAATAATG 338046 36 100.0 30 .................................... AAATAAAAAGTATGATGATATGCTGATAGA 338112 36 100.0 30 .................................... TATCAGTATGCAATGACTTCTCTTCCCACT 338178 36 100.0 30 .................................... GCCGCCGCGCACAATTAACAAGAAGGCTGG 338244 36 100.0 30 .................................... CCTGACTACTAATACCTTGAACAGCTGCAT 338310 36 100.0 30 .................................... TTAGGATACTGCACAATTACAGCACACCCA 338376 36 100.0 30 .................................... CACTAAAAGGTTAAGGGGAGAAGTTCCATG 338442 36 100.0 30 .................................... ACAGTAACAGGAATTTGGAACGTGTTTGTT 338508 36 100.0 30 .................................... TTGCGTGAAATCAGTCGTCACACGCCGGTC 338574 36 100.0 30 .................................... GCTGGTGTGATAAGAATGATGCAAAATCAC 338640 36 100.0 30 .................................... CACTTACTAACATAATAGTTTCCTCTTTTC 338706 36 100.0 30 .................................... CGGCATCGAAGAGTTAAACATGTTGTTTGA 338772 36 100.0 30 .................................... ATCGATATAGCTAACTCCACTTAATCCAGT 338838 36 100.0 30 .................................... AGTGAACTAAAGAAGGCTTATTCTAATTCT 338904 36 94.4 0 ..........................A.......A. | ========== ====== ====== ====== ==================================== ================================ ================== 27 36 99.7 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTCAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCTGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAATAATTTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAATTTAAGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACAAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAATCCTGTTATGACTAAACAGGGTTTGCCTCCGGAAGTCTTTATTGATGAGGATTTCGTTCAATTTGGCGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : CTTATGTACATGGCAATTTATATTGAAATTAAATACCATATTAATAAAGTGAAAGCGCTTAGGCGCTTTTTATATGCCATATATGTCAAAAAAGAAGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCGAGTGAAAGAACTACTTGTTTCAACAATAATTATTGGTGGCGTTCTGGGCACCATGTCTACGGTTAATGCTGCTGAAAATACAGCGCATGTATCGACACAAGTGCCAAGTACAATAACATCAGGTTCGAGTGGTACATCACAAGCGCCAAGCACTAAGACATCAAGTTCAACCATAAATGAGTCGAGACAAAATGATAATTATAATGTGACGCCGTCAACAAGGTCTATTCAAGTACATCAAGCTAAATTTAAAACCGGTTCTGTAATCGCATTGACTAATTCAGCAAAAACGTCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTCAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //