Array 1 24381-25368 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNEU010000037.1 Vibrio fluvialis strain GCEnv4 NODE_37_length_33708_cov_26.608201, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 24381 28 100.0 32 ............................ GAGAGGATGACCCGATAAGTGAATAAGCCCCG 24441 28 100.0 32 ............................ ATACGCGAAAACTTTCATTACTGCAGCGTGGA 24501 28 100.0 32 ............................ TGACTGGCGGTGAATGCTCCGGTTCTGGCGAA 24561 28 100.0 32 ............................ ATGCAAAAGCCTGAACTGGCTCACCCGGTTCA 24621 28 100.0 32 ............................ TTAAACGTTCCCGTTCGGTCGCTGTCTGCTTT 24681 28 100.0 32 ............................ TCGCTTATCGTAACGATTTAGACCGTGCTCAG 24741 28 100.0 32 ............................ TCGGCAAAAGACTTGAGTCCCCTCAACAAATT 24801 28 100.0 32 ............................ ACTAAATGCTGACAGGCTACCTAGGCTTGCTC 24861 28 100.0 32 ............................ TCAAAAAGAAAAGGCGCTGATTGCGCCCGTTA 24921 28 100.0 32 ............................ AGAATTCGACCACTTCGCGGAAGCTGGAAAGG 24981 28 100.0 32 ............................ ATCGTTTAATAACTCTCATTCGAGCTCTAACT 25041 28 100.0 32 ............................ TGACCAAGAAGCTTGAGCAGGCCGAAGCGGAT 25101 28 100.0 32 ............................ TCTTGGATTTCACTTTTGCAATTCGTTCTTTT 25161 28 100.0 32 ............................ TCAACCGGAACGCCTTCGGCTGAAACTTCAAC 25221 28 100.0 32 ............................ TGTTTGTGATTCAGAAGTTGAGCCACGGGGTT 25281 28 100.0 32 ............................ TCGACGAAGTACTTTACCCCAACTGCCCGCTA 25341 28 71.4 0 .C.......TAC.......AGG.....T | ========== ====== ====== ====== ============================ ================================ ================== 17 28 98.3 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAACGGGATATGCAGCAAAAAGCCGAACTATGGGCAGCAAAATCTGGCAAACCGCTGGTGGAATGTCTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAATAGCAAGTTTCCGCTGTTTATTCAGATGCAGCAGCAAAGTACATCACAAGATGGGGGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGCCAATCAGCATTGGCTACTGTACCGAACTTTTAAATTGAACGAAAAAGGGTATTTTTTACCCTTTATTTTTGCTATTTAAAAATATGCTTTAAATACAAATGGTTGCAAATGGTGGTTTTTAACAGGGCAAAAATGCATTTTTCATCCTAACTACTTGTTGCAGCATTCTTTTATAGAATTATTTTATT # Right flank : TTAAAACGGGATTCATGGCAAACGGTCGTGGAAGTTGTATCTTACATAAAAACCTAACAACGTCGATATCAATAGGTTTTTTGTGTACTTATTGGTATGTGTAGTGTGTTATTCTGAATTGGTTGCAAGAGACCAACATTAAATTTTTCATAATTGTTTATTGATTTAGTTAAATCATACGTTATTTTCGATAACAACAATGACATTTTAGGTTCGAAAGTATCCAATGATGTTTGATTTCCAGCATTACTATTTCTTACATTGCCACAAAGCATCCTTGTTCATATTACCCAACTAGTGACAGTGTCTCCGTCATTACTTGATACCCAATCTTCTCGCTAGGCGGTGTAGGTTTCCACTATCCAGTTCCAATTGTCGAGCCGTCGCTGCCCAGTTGCCTTGGTTATGATTGAGCGTTTGAACAATGATTTTTTTTTGATACCTATCCGTTGCTTCTTTAAGCCCCATACCTGATTCACTAATCGGCGAAATGTTGGTTG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //