Array 1 6749-7509 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYH01000100.1 Weizmannia coagulans strain B4100 NODE_190, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 6749 32 100.0 33 ................................ ATTGTACTTTTTGTTTATCACCTCCAGCCGGAT 6814 32 96.9 35 ....T........................... TCGATAATGTGCTTGTCCAATTCCGCCTGTGCTTC 6881 32 100.0 34 ................................ CTCGAGTAACCGAGTCTGATCATGAATCAATCTT 6947 32 100.0 35 ................................ CAGCACAGAATTGGACGAACAAGAAAAGAAGCGGC 7014 32 100.0 34 ................................ GGCCGGGCCTATACATTAATTTTGTTGAGGCGGC 7080 32 100.0 34 ................................ CAGGCTTTTACGGATTCGGCGTGGAGACCACCGA 7146 32 100.0 34 ................................ AATTTGAAAAAGAGTGGATTTAGAGATTTGGAAG 7212 32 100.0 34 ................................ GGAGCCGATAGGCGGAGAAAATACTACCCGGCCC 7278 32 100.0 35 ................................ GCATATTTTCCGACATAGGCCAGCACCGCCGGGAT 7345 32 100.0 35 ................................ CAAAAGGGGACATTAACGAACTGGCTTTTGCAAAG 7412 32 100.0 34 ................................ TAATCGGATGAAAACCATCTATGACTTTACGGAT 7478 32 96.9 0 ..................C............. | ========== ====== ====== ====== ================================ =================================== ================== 12 32 99.5 34 GTCACACTCCTTGCGAGTGTGTGGATTGAAAT # Left flank : ACAGGTCTTTACTTCAGTGCCACTCTTTGGTTTGGGTCAGACGCTTACCAGATACTTAAAACCTAACAGTGGAGAAGGTCCTTAGAATGATTAATTAGTTTTAATAGGATATTCAACATCTGTCGAATTAGACGTCGATGCTGAAATTAATCGTAGTAGTACTGATGACTTTTTGCAGCAGGAAACAGAGTAACACGATTTAGTTCATTTTATATAGCAGAAAAACAAAAATTAACTAGGCCAATTTATCTCGTAAGAACGATTAGTTATAAAAGTGGTTTTTTAACGTGCTGCTTTTTACAACATAGCAGTCTGTAATAAGAATGCTTTTTGGTGAAACTGTGCGAATGAATAGTGTACTTGAATTTCCCATGGGATTCGCACCAAAAATCCAATAGGTTTTTCCCTATTAAGGAATTTTTTGTAGCAAAATTTGGGATAATATGGGGTAATTTGTAGATATTCGTCAAAATCTATTAAATTTCTACACGATAATAGCT # Right flank : TTGAAGTAAGGGACGTAACAGAAGCGGAATTGGGGAAAGTGTTGGAAGAACAGCAGCAGCGAAAAGAACAGCGGAAAAAAGAGGAACTGCTAAAAATTGAGCAAGAGCAGGCGTTGCGTGAACAACAGGAAGCAGAAGCCCGCTTGGCGGCGATGTCGAAGGAAGAAAGATTGCTCTTTGCTATACAATCATTAACAGAATCACAAGCAGACCTGGAAAAAAGCAAATCGGAGTTATATGAGGAGGTAATCGCACAGCAAAATCAGGAAGCTGCTTTAGCCCTCCGACAATATTGGGAAAAAACAGGCCAGTGGAGAGTCAATAAGAAAAAGAAAAAACAGTATGATAAAGTCCTATCCATTAAAAAACTGTTAAATATAGAGTAAAGGCACAGGATCTCTGTAAACAGCTTTTTTTGATGTAAATAGCGAAAGGAAGAAAACTCTTATTCAAGATTTCTTCCTTTTTTCTATGGAAAATATTCAGCTGCTTCAAATTTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACTCCTTGCGAGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 1 47006-44853 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYH01000099.1 Weizmannia coagulans strain B4100 NODE_185, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 47005 32 100.0 35 ................................ TGTCTCCCAGTCGTACAGTGGATAAAAATTATAAA 46938 32 100.0 34 ................................ GTTTTGTTTGCGGCGGCTGGCGCTGGCTTAACCC 46872 32 100.0 33 ................................ CATCCGTATACCAACTATTTTCTGTTGTGTTAC 46807 32 100.0 35 ................................ ACTTCGGTTAATTCAAAGGAAATATTATTAGTGGC 46740 32 100.0 34 ................................ ATCGATTTGGTCCTGTAAATCTTGGATTTGCTGC 46674 32 100.0 35 ................................ TTTTGCTGTCTCTCATGTTTTAACCTCCCAAACAA 46607 32 100.0 35 ................................ GTATATGATGGCGAAGTTAGCACAGCACAGCTTTC 46540 32 100.0 34 ................................ CATCGGACTGCGGCGCAAAATGTCCGCCTGTTCT 46474 32 100.0 35 ................................ ACCTCGCCAGCTACGCCAACTTGGTCATCAGCAAG 46407 32 100.0 34 ................................ ACGACAACGCCCTGCACGCCGCTAGCCTTGACGG 46341 32 100.0 34 ................................ CGCTTTAATCATCAATTACTTGAGCTGCATCCGG 46275 32 100.0 35 ................................ CTTCCGTCCCTTGTTATATTTGTTGATTAAGTCTT 46208 32 100.0 34 ................................ CCCTTGGATTTTAGGTAATCGACCAGACTTAAGG 46142 32 100.0 33 ................................ AAGCAGGTCAATCCGTTTTTCGATTGTGAGCTT 46077 32 100.0 33 ................................ GTAGACTGATTCAGAAAAGATCCGGAATGAGAT 46012 32 100.0 33 ................................ ATTTAATTAAAATTCTATTTTAATAATCTTAGC 45947 32 100.0 35 ................................ TATTGTTTGTATTGACTCATCATTGAGCCACTTTT 45880 32 100.0 34 ................................ ACCAGCAAGTTATTAAAGAAACATCATTCCGCAA 45814 32 100.0 34 ................................ CTTTCAGGCGTGCTAGAATGTTTTGAAACATGGC 45748 32 100.0 35 ................................ TGACCTCGACTTCCGGCGGCTTTTCTTCGATTGAC 45681 32 100.0 34 ................................ TTATCAACCGGTAAATCAAGGCTTGCCGCGACCA 45615 32 100.0 35 ................................ TGACCTCGACTTCCGGCGGCTTTTCTTCGATTGAC 45548 32 100.0 33 ................................ ATCTCTGGGTTGTCATTTTCACCACCGATAAAA 45483 32 100.0 34 ................................ CTCCTAATTTTTTGATTTAATGGGGGAGGGTTGC 45417 32 100.0 34 ................................ CCCTCTTATACACTAGAAAATTTCAAGTAATTAA 45351 32 100.0 34 ................................ TGGATTGCAATAATAATTAAAGTGAATCAGCTGT 45285 32 100.0 34 ................................ CTGATCGTCGTAATAAGTCATGTTTAAATTCCTC 45219 32 100.0 33 ................................ TATAAATCGGTCCATTGGGATATTAGTTTCTAC 45154 32 100.0 35 ................................ ATTTGTCACCATCTTGTACTCTTGCAAATACCTTT 45087 32 100.0 36 ................................ CTGCCCATAAATGCCGTTTGTTTCTGTTGCCATAAC 45019 32 100.0 36 ................................ CTATCTCAACGATTCGGCTCATAAAAATTTTCGCCC 44951 32 100.0 35 ................................ ATTTTGTCGAAACAGGAACAATGCGGACCGGCGGC 44884 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 33 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : AAATGCCGGATTTGTCGGATGCGGATTGGTATTTTGAGTCGCTCCCTACATGGGGGCGTGGATTGAAATAAATTGGTCTTTAGACAAATAAAACTCATTACCGTCGCTCCCTACATGGGGGCGTGGATTGAAATTAAAAATTTTTTAATCAAAAATCTGATGTTTGAAGTCGCTCCCTACATGGGGGCGTGGATTGAAATACGAATTTGAAAGTGACTTGAAGCCAGTCCACAAGGTCGCTCCCTACATGGGGGCGTGGATTGAAATCGCTCATCCATCCCATTTCTAACAGCCCTAAAGTCGTCGCTCCCTACATGGGGGCGTGGATTGAAATTCAACTTTTTCATCCACGGTCAATCCTTCCAATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATCAATATAGTATTGAACCACATTTGA # Right flank : CGCTATTTCCACCATTTATGATTTGCCATACAGNNNNNNNNNNTCGAAACAGGAACAATGCGGACCGGCGGCGTCGCTCCCTACATGGGGGCGTGGATTGAAATCTGTAGCCTTACCAGCTTTGCCAATAGCCGACAAGTCGCTCCCTACATGGGGGCGTGGATTGAAATTTCTCCAGCTCTTCAAGCTCAATCCAGCCGCCCCAGTCGCTCCCTACATGGGGGCGTGGATTGAAATCAAATAGGCATTGAAATCTTTTGGAAGAACGATCGTCGCTCCCTACATGGGGGCGTGGATTGAAATTGGTCATGACACTTATCCCGATTATTGCCGCGTTGTCGCTCCCTACATGGGGGCGTGGATTGAAATACAACCGGGTTAGCCGTGTCTTCTTGGATGTCGTGTCGCTCCCTACATGGGGGCGTGGATTGAAATATCCACAATAACCAGCCGGTAACTGACAGTTTGAGTCGCTCCCTACATGGGGGCGTGGATTGAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 50559-47172 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYH01000099.1 Weizmannia coagulans strain B4100 NODE_185, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 50558 32 100.0 36 ................................ CTGTTAAAGCACCTGCGCCTGCAATCCAATATGATA 50490 32 100.0 34 ................................ TCCAACCGTTATTGCTCGCAAGGGGGACGAAATT 50424 32 100.0 35 ................................ ATCTGCTGCCCCGGTTGTTTACTTAAATGGCAACC 50357 32 100.0 34 ................................ TTGATATTCCTTTTTTACTTTGCTTGCAGATGCT 50291 32 100.0 34 ................................ AGTTAAGCGCACAATTCAGCGTGAAATACAGAAA 50225 32 100.0 33 ................................ TAAATGATCTTTGTCGTTTGATACAAGACTAAA 50160 32 100.0 33 ................................ ATTCGTGGTCAAAAGAGTCAGCGTGGGTATATG 50095 32 100.0 33 ................................ GGTTTAACTTTTATATTAAACAACAGGTGTTAG 50030 32 100.0 33 ................................ GTCCGGGTAGGGTACCCCGGCTTACGCCACCCC 49965 32 100.0 33 ................................ ATACTCCCGGCAACCCTGGCCAGTAATTTCTAG 49900 32 100.0 33 ................................ TATACTTGATTAGTGTGCTTTTTTTGGGTTTTG 49835 32 100.0 33 ................................ GACACGAACACACTTTGCAGTAATCCGTTTGAG 49770 32 100.0 33 ................................ AAATATGGAAATGTTTAAATACTGTTGGTATTG 49705 32 100.0 34 ................................ ATCTGCGCGTTTGATGCTCCAGTGAGCGCCTGAA 49639 32 100.0 35 ................................ AAGTCAAAAACGCCGGCGTTTGTGCCGTCATGTGA 49572 32 100.0 34 ................................ CGATATGATGGACGTATTGCAACTCGCCAAAAAG 49506 32 100.0 34 ................................ TTAACAGCGTAATATTTCGTCACCTTATCCGCCC 49440 32 100.0 34 ................................ CGCACTTATCTGCAATCACTCGGCATGCTAACGG 49374 32 100.0 34 ................................ TTGGTAGTTAATCGCTAAATAAACGGTATCCCCA 49308 32 100.0 34 ................................ ACGAGCTGGACGCGGGTGGCAAAAATGTTGGAGG 49242 32 100.0 34 ................................ CGCGAGGCATGGTGCCGTTCTTCTTGGCCCACAG 49176 32 100.0 33 ................................ TTCCTTTTTTATTTTTTTATATTAAAGCCTTAC 49111 32 100.0 34 ................................ AAACCCTGCTTGGAATAAACCTTTGGTATATACC 49045 32 100.0 34 ................................ TTTACAGTAGACTTATGGGATGGGGACGGAAACA 48979 32 100.0 35 ................................ ACTCCTTCCCTTTGTGGTTAAAAAAATCTTTCAAC 48912 32 100.0 34 ................................ CCGATTGGTGATGAGAAATTCCATTGTGATTCTC 48846 32 100.0 34 ................................ AGCTTACTTGCATCTATGGAGCCGGCGGCAATAC 48780 32 100.0 34 ................................ AGAGACGGTAGACGCATCAATTGCCGTATCCGCT 48714 32 100.0 34 ................................ TTTTCCATTATCTAATCCATCTATTTGTCTAAAA 48648 32 100.0 33 ................................ TTACCAGTAACCACCGTTTGTACATTTGAAATC 48583 32 100.0 34 ................................ CCATAGTCATATGTTTGCCCACTTGCCGGTGCAG 48517 32 100.0 33 ................................ TCCTTTTCCTTGGCTCGTAAAGTCGGCAGATAC 48452 32 100.0 34 ................................ TCGGATATTCGCACCCAAATATCCACCCTTAATT 48386 32 100.0 33 ................................ ATAACAATCAACCGGTAACTGACAGCTTGACTG 48321 32 100.0 34 ................................ CAAATTGTGGATTTCGAGATGCAGCCGGAGCTTA 48255 32 100.0 34 ................................ CTGGCCGACTGCCGCGGCGTTGTCTGCGGCTGCT 48189 32 100.0 33 ................................ GCAAGTGACGGACCGATACGAGTACCTGGCCGA 48124 32 100.0 33 ................................ CAACGTTTCTAGGTACGCCTTAATAGCACTGAT 48059 32 100.0 35 ................................ AGCGGATGTCATAACGAAGTTTGACGAGTTGACAA 47992 32 100.0 35 ................................ TGCTCATCTCCATCCACAAGATCGCCACCATGAAC 47925 32 100.0 32 ................................ GGCCAGCCTTATCGTTATCGCCACCAAGCCAT 47861 32 100.0 34 ................................ ATCGACGTTGCCGCCGCATCACCGCCGGCTGTTT 47795 32 100.0 33 ................................ ATCGCCATCTACAAGGTCGCCGCCGTGGACGAC 47730 32 100.0 33 ................................ GTGCCGTCGGATTGCGTAATATACGGGTTATCA 47665 32 100.0 34 ................................ CGACTCGTCGACTTGTATAGCGCGGGCGCTTATT 47599 32 100.0 34 ................................ GATTCGTGTCTCCGGCTCGATGTCAGGATAGAGA 47533 32 100.0 33 ................................ GCCGGATTTGTCGGATGCGGATTGGTATTTTGA 47468 32 100.0 33 ................................ AAATTGGTCTTTAGACAAATAAAACTCATTACC 47403 32 100.0 34 ................................ TAAAAATTTTTTAATCAAAAATCTGATGTTTGAA 47337 32 100.0 35 ................................ ACGAATTTGAAAGTGACTTGAAGCCAGTCCACAAG 47270 32 100.0 35 ................................ CGCTCATCCATCCCATTTCTAACAGCCCTAAAGTC 47203 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 52 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : AGATGAGTATCCTCCTTTTCTGTGGAAGTAGGTGGAAAATTTTGCTTGTTGTCATTACTTATGATGTGAGTACTTTGACCGGAGCAGGGCAGAAGAGGTTAAGAAAAGTAGCGAAAGTTTGTCAAAACTATGGCCAGCGTGTCCAGAATTCCGTTTTTGAGTGTTTCGTTGATGCAACACAATTTGCCTCTTTGAAGATTGAACTGTCTAATATTATTGACCCAGATGAAGATAGCCTGAGATTTTATCAGTTGGGAAACAACTATAAAAATAAAGTAATGCATATCGGGGCAAAACCATCTTTGGATTTAGAAGACCCCTTGATCTTTTAGTGCGAAGGTGTAGTGCACACGATTTTCCCGTGTGTTCGCACCAATATGCTAACCAATATTTTACATATATTGGTTAAATGTGGAAAAATAGTCCTTTGTTTATCAGAGGAAATGGCGAAATTTGGTTGTTTTAAAAACGTACATTCGCCTTTTTGACCAAATTCCGCT # Right flank : TCAACTTTTTCATCCACGGTCAATCCTTCCAATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATCAATATAGTATTGAACCACATTTGAGTCGCTCCCTACATGGGGGCGTGGATTGAAATTGTCTCCCAGTCGTACAGTGGATAAAAATTATAAAGTCGCTCCCTACATGGGGGCGTGGATTGAAATGTTTTGTTTGCGGCGGCTGGCGCTGGCTTAACCCGTCGCTCCCTACATGGGGGCGTGGATTGAAATCATCCGTATACCAACTATTTTCTGTTGTGTTACGTCGCTCCCTACATGGGGGCGTGGATTGAAATACTTCGGTTAATTCAAAGGAAATATTATTAGTGGCGTCGCTCCCTACATGGGGGCGTGGATTGAAATATCGATTTGGTCCTGTAAATCTTGGATTTGCTGCGTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //