Array 1 373026-375067 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023345.1 Salmonella enterica subsp. diarizonae strain HZS154 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 373026 29 100.0 32 ............................. AGATGAACGCCAAAAAACATGACGAACAGCAG 373087 29 100.0 32 ............................. GGCCATTGTGGGACGTATGAACCATCAACATA 373148 29 100.0 32 ............................. GGGATCTGAGCAATACAGCGGGGAAATCAGCC 373209 29 100.0 32 ............................. CAGCTATTTCCCAACATTGCCCGTGTTATTGG 373270 29 100.0 32 ............................. CTTAACGGCGAGAGCGTGAAGGTGTATCGCTA 373331 29 100.0 32 ............................. CCAGACAAACCCTGCTCGTTTCAGATGCTGCG 373392 29 100.0 32 ............................. TGACTTTAACGCGAGCACCTTTGGTATTAGTT 373453 29 100.0 32 ............................. GCAACTAATGTTAGTAAAAGTTAGCTAATAAG 373514 29 100.0 32 ............................. ACAGCACGTTAAAGATGCTGGCGGTATCTGAA 373575 29 100.0 32 ............................. TGGACGAGCTGATTGCTGCAGGACTTATTATT 373636 29 100.0 32 ............................. GCATACTCACTGAATAAATCGAAATATTTAAA 373697 29 100.0 32 ............................. ACTGTTAGGGTGACAACGCCGACCACAACGTC 373758 29 100.0 32 ............................. GCTTTCAGGGATTCTATAGTATTTATATATTT 373819 29 100.0 32 ............................. ATATTAGTGGGCGCAATCAGTGTCACCGTCCC 373880 29 100.0 32 ............................. GCTATTCAATAAATAAATCAATAACTGCATAT 373941 29 100.0 32 ............................. TGCTGTATCTCGGTTGGTTCGATGGCAATCCG 374002 29 100.0 32 ............................. TCCGTTAACCAGGGAAATGCCAGATGACAGCA 374063 29 100.0 32 ............................. CCCTCAAATCAGACGCCGTTACCATCGCAGTT 374124 29 96.6 32 ..........................A.. TACGCGTACAGGTCTGGCAAAATCAGCTTCAT 374185 29 100.0 32 ............................. ACTGGTCCCGTGATCTTAACGCCAGGATTCAG 374246 29 100.0 32 ............................. GCTACCGCCGATAACACGAAACGCATCGGCCC 374307 29 100.0 32 ............................. CGCCCGGTTATCGCCAAAGAACGCCAGAATCA 374368 29 100.0 32 ............................. CACCACGAGTAACGAAAAAGCACAACACCACA 374429 29 100.0 32 ............................. TACATATCGAACTTGCCCATTACTAACACCTC 374490 29 100.0 32 ............................. CGTACAGCAACGGCGGGTAATGGCGAGCGAGG 374551 29 100.0 32 ............................. CTGTTCCCGCTCGTTCAGGTCGGTAACCGGAC 374612 29 100.0 32 ............................. TATGCACAGCAACCTTTTCTATCGGTGAACAC 374673 29 100.0 32 ............................. CCGGAAAAACCACAGGCCAGCTTAATGCGATG 374734 29 100.0 32 ............................. GGCTGATAATCCGGAAGATGTTGTTGTGGAAA 374795 29 100.0 32 ............................. GAACATCAGACCTTATCACCTGGTGGCAATCG 374856 29 100.0 32 ............................. CAGGAAAAAACCGGGGAAAACGGCAGCCGCGT 374917 29 100.0 32 ............................. TTTGCGCTCGCTGACGTCAACAGCTTCTACGC 374978 29 96.6 32 ............T................ CTGCCGGTCAGGCTGCTGAAGTTACTGTGGTC 375039 29 86.2 0 ............T............G.TA | ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTCGCTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCTGAGCCGGAATCTCTGGGTGACAGCGGACATCGGGGGCATGGTTAATGAGCATGGTGGTGGTGGTGACTGAAAACGTACCGCCGCGCCTGCGAGGGCGGCTTGCCATATGGTTACTGGAGATTCGTGCGGGGGTTTATGTTGGCGATACATCAAAACGCATTCGGGAGATGATCTGGCAACAGATTACACAACTGGGTGGAGTCGGAAACGTAGTAATGGCCTGGGCAACAAATACGGAGTCAGGTTTTGAGTTCCAGACCTGGGGGGAGAACCGCCGTATTCCGGTAGATTTGGATGGACTCAGATTAGTTTCTTTTCTTCCCGTTGAAAATCAATGAGTTGAACGTTCTTTAATAATAAGAAATTGTTATCTTAATGTTGGTGGATTGTTGGGTGGCAAAAAAGGCTTTCTGGAACAAATATATAGATTTAGT # Right flank : ATTTTTACCAGCAGATCAGGATGTCTTTTCCGTCTTCGCCAGCTCTTTTACTAGCGGCAGCATTATCCGTACTACGTCGCGACTACGGCGCTCAATTCGTCCTGGCAGCGCCTTGTCAATATGCTGTTGATTATCAAGCCGTACGTCGTGCCAGCTATTGCCGTTCGGGAAGGAAGCATTTTTCGCGCGTTGCTGGTATCCGTCTTTTTTACCCAGATTCCAGTTTGTCGCCTCAACGGAAAGCACAGAAATTCCCGCTTTATCGAAAACCTCCGCATCATTACAGCAACCCGTTCCTTTGGGGTAGGACGGATTGAGCCCCGGATTGGTGCTGGCGGCGATACCATAACGGCGCGCAATCGCTAATGCTCGATCGCGGGTCAGTGTACGCACCGCTTCCGGCGTATTTTTCCCGCTATTAAAATAGAGCTTGTCGCCAACAATCAGATTATCGAAATTAATGACCAGCAGCGTATTTTTCTTCTCAGCGTCACTCATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //