Array 1 46000-47107 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MUYC01000006.1 Moraxella cuniculi strain CCUG 2154 2154T_ctg_0000006, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     46000	    28	 100.0	    32	............................	TGCTGACTTTTTTGGCAGCGTTATTGATTGCA	
     46060	    28	 100.0	    32	............................	CAAGAGCCCTCGAGGTTAGTTTTTTTGCAGAC	
     46120	    28	 100.0	    32	............................	ATGCCACGCTCAACGGCTAAATTACCGCCGTT	
     46180	    28	 100.0	    32	............................	TTAACTGTTAGTTTAACCTTACCTTCTTTTAA	
     46240	    28	 100.0	    32	............................	AAAAGAACCTGCCTTATGGAATACGCTTGTAG	
     46300	    28	 100.0	    32	............................	TGAATGTCCGCTTTAAGTTTAGCTTTACTAGC	
     46360	    28	 100.0	    32	............................	TGTAACGTCTTACCATCAGCTAGGTACTCACT	
     46420	    28	 100.0	    32	............................	TGTCATGAGTGCAAATGACAGCATTATTAACG	
     46480	    28	 100.0	    32	............................	CTATAAAATAAGGGCAAATAAGTTCTGCAATA	
     46540	    28	 100.0	    32	............................	ATGAAAATGTTCAAAAATGCAGACTGCTACGC	
     46600	    28	 100.0	    32	............................	ACAGAGACAGAGAAAATGAGTTACGCACCCCT	
     46660	    28	 100.0	    32	............................	TGTAGCAAGGGCTATCACTTACACGGAGAACG	
     46720	    28	 100.0	    32	............................	TTACCTTCTTTTAATAAAGTTTCAACCAGCTT	
     46780	    28	 100.0	    32	............................	AACGTCATTAACCCTAACCCATGCTATGATGA	
     46840	    28	 100.0	    32	............................	TTTTTGAGCAAGAACATCTGATAACTTAGCTA	
     46900	    28	 100.0	    32	............................	TTTATTACCCGTAGTACCTTGTGCCGCTAATA	
     46960	    28	 100.0	    32	............................	ATATACCCCATATTGCGGCACATCATCGGTGA	
     47020	    28	 100.0	    32	............................	ATCTAGGAGCCCCATTCATGAACTTTATTAAT	
     47080	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
        19	    28	 100.0	    32	CTTCACGACCGCATAGGTCGCTTAGAAA	                                	       

# Left flank :   ACGCATGGCAGCTTGAGTAATCGATGTTCCCGTACCAAGCAAAATACAGGTGGTGTTGGCGATGGGGATATTATAATAATGATTTTCGTATTTGGCTTCGGTCAGATACAAAACGCGGCCATCTTTTTGCATCACTCGGCAATGCTCAAGATAAAAAATATTTGCCCGCTTTGAATGCAAAATCGCTTTGAGATCCTTAGGCTTAAGCGTGTCCATGGCGTCAATTTCCTTGATGATGAATTTAATTTAATCACACTCATTGTAGCCTGTCAAGCGATGATACGACCAAATTATAAGCTTATATTTTCCATCTGCCACATTGGTTATGCTATACTAAATTTGCCGTCAGATGATGATGGAAGTAAAAAACCTTTATTTTTTTAACTATTTAAAAACTTAATAAAATCAATAAGTTATAACTGGTCAAATTTTGATTGGGTAAAAAGGGTCAATTCATCATAAATGGCTGTTATTTCTTAATTTTTTGGCGTATAATTACT
# Right flank :  ATAAATCAACTTGTCAGCAATTTCCATTATAAGGTTTATAATAATACATATTGTTACTGGTTCCACATGGAACATTTATCATTTTGCATCAAAAGTTTGCAATTTGCTGTTTTAATGGTAGTATGATAAAAACAACAAATAAGTCAACCATGTCTAACACTCAGCCATTAACTCTCGATGTCATCATTCCTTGTTACAATGCCACAGCTACCCTTGAGCGTGCCGTACACAGCACGCTAGGCCAGTCTGCTTGTCGGCGGCTGATTTTAATTGATGATGGCTCGCACGATAACACACCTGCCTTAATACGCAAATTTTCCCAAGATTATCCCAATAAAATCTCTGCCTTGGCATTTGCTGACAATCAAGGTGCGGCAGCGGCTCGCAACTTTGCAGCGATGACAAGTACCGCCGATTTGCTTGCTTTTTTAGATGCTGATGATGCTTATGAAGCACACGCTTTGGACATCATGCCCAGCTTATTTAACATGATGCCAATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTCACGACCGCATAGGTCGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.40,-7.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.24,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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