Array 1 44476-50180 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACEXJ010000001.1 Arcanobacterium sp. JY-X174 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 44476 29 100.0 33 ............................. TTCGTGTAGGTGATGATGAGTTTTGCGTCCCCA 44538 29 100.0 32 ............................. GCGACCCAACCGAACTTTTCTCCGCTGTCCAC 44599 29 100.0 32 ............................. ATCCGTTGATTGAGCATGTTCGCATACGCTTC 44660 29 100.0 32 ............................. CTGTACTTCCCGCCGCCTATGTGCCCGAGGTG 44721 29 100.0 32 ............................. AAGGCTTCGGCGTGACTGTCGTTTCGCACTCC 44782 29 100.0 32 ............................. ACCCGCCTAGCGGACATATGCAAGTAATTCAG 44843 29 100.0 32 ............................. TGGTGGATGATCCGTTTCCGCTGGCCACGTCT 44904 29 100.0 32 ............................. ATCCCAGCGCTGATCTTGGGCAAGAATCTGGT 44965 29 96.6 32 ............................A CATCTTGGCGGCGGCCCGTTCTGCACGAATCG 45026 29 100.0 32 ............................. CTATCGCATCTCGCCTTCCCGGCATGAGATGC 45087 29 100.0 32 ............................. CTTGAACCGGCAATCGGACCGGTCGCTATCTT 45148 29 100.0 32 ............................. AGGCTCAAGACGGCGACGCGTGAAGGTCCGGC 45209 29 100.0 32 ............................. ATTCAAAAACGCGTAAACAAGGGTGAGAAGAT 45270 29 100.0 32 ............................. GCTTCCCCCAGAAATGCGGAAACCCCCACATC 45331 29 96.6 32 ............................G GCTCATGCCGCCTCCCCGCCGCCGATCTCTTG 45392 29 100.0 32 ............................. ATGGACGGTGAACCCGAGACTCAATCAGGATG 45453 29 100.0 32 ............................. TGGGAAGATTCCGTCAGTCTGGTTTTGAGCGC 45514 29 100.0 32 ............................. GTGGTTGATCAGGATTTTGGTGCGACGAACTC 45575 29 100.0 32 ............................. CTGTCAGGGAGAAGGTCGCGTCTCCTTCGAAT 45636 29 100.0 32 ............................. ACCATTTCGCGGGCCTCTGTCTCGTTGTTTGC 45697 29 100.0 32 ............................. ACAACCTCAGCGACGGTAAGATGGCGCCACGT 45758 29 100.0 32 ............................. GGATCCGCTTCTCACCAGAAGCCTGGACATCT 45819 29 100.0 32 ............................. AAGCATTCAAGGAGAATTCATGAGCATCAACG 45880 29 100.0 32 ............................. AACGGGAAAGACGGACCGAGCAACCCATATGA 45941 29 100.0 32 ............................. ATGGCGCGCTGCCCCGAATGCAAGGGAGAGGT 46002 29 100.0 32 ............................. CACAGCGCCAATATTTGAAGCAGAGGAATGAG 46063 29 100.0 32 ............................. TGCGGAGCTGCGCAAGATCATGTCACAGCGGC 46124 29 100.0 32 ............................. GATAGATCGGTCGTTGACCCGGCAGTGCGGAT 46185 29 100.0 32 ............................. ACGAAACACTCACCACGGACAATCATTTCGTG 46246 29 100.0 32 ............................. CCCCGGCAGCGTCCGCGTAGATTGTGACGGCG 46307 29 100.0 32 ............................. GAATCCTTGCTGCGAGAGCTCCTCCCGCTCAT 46368 29 100.0 32 ............................. AGGGACCGAACCCGCTGGCTCGGCCCCGCACA 46429 29 100.0 32 ............................. GACACAGACGGGCATCCCGATCATCGACTGTG 46490 29 100.0 32 ............................. ACAATCACCCCAATTCAACACAATCAGCTGAC 46551 29 100.0 32 ............................. AGTAGATGGATACATTAAAGAGCTTGTTGATA 46612 29 100.0 32 ............................. GATCCCCGCCCATGTCCCGCGAGACGCCGACA 46673 29 100.0 32 ............................. CAGTATGTGCCGTTTTAGGAAGGAGGGGCGAA 46734 29 100.0 32 ............................. TGCGCAGTGAGGTTCAGTATTTTTGCGATGGT 46795 29 96.6 31 ............................A AACTTCGTGAGCAGGACGTGCTGCTCACCGC 46855 29 100.0 32 ............................. TCAACTTCTCCAGCCATGTATGGCCTGACTTC 46916 29 100.0 32 ............................. CTGTTGGAGCAGGTGGCGGCATTTTTGTTTTG 46977 29 100.0 32 ............................. CAGAAGGCAAACAGCGGATCATCAACATGATT 47038 29 100.0 32 ............................. ATATCAAGCCCTCTACAGGCTCGGCGGGAAGC 47099 29 100.0 32 ............................. ATTCTTGGCGGCGTCAAGTGTCCTGTCCGGCG 47160 29 100.0 32 ............................. ATGTCGACTTCTTTCGTTTTCTGCGTGGTCAG 47221 29 100.0 32 ............................. GGAGGTGCCGTTCGCTGGCCAATCAACCGCCC 47282 29 100.0 32 ............................. ATCCCGAAATCGATATCATGCCCACCAACTTC 47343 29 100.0 32 ............................. CGTCCCACGGCGCGGAGAGTCCGTCAAGGATC 47404 29 100.0 32 ............................. TACACAAGCCACTCGACGCGCTGAACACGAAC 47465 29 100.0 32 ............................. GACGAGCCACCAACACGAATATTTGAATCATT 47526 29 100.0 32 ............................. ATTCAGGCGCAATACGTGCTGCAAGCCTGTGA 47587 29 100.0 32 ............................. CCATGGTGAAAGCCGCAATCGACGGGCTGGTG 47648 29 100.0 32 ............................. ACCTCACTCTCACGCGACGGATCAGCAAGAAC 47709 29 100.0 32 ............................. CATCGACCTCCACGCCTGCATGTCCACCTTGC 47770 29 100.0 32 ............................. CACCCGGCCGCGTTTGGCAGGGGTGCGGTCAT 47831 29 100.0 32 ............................. CTATGGCGGGGTCCAAGACCTTATCAGGGAAG 47892 29 100.0 32 ............................. TATTACTGTCGCTAAGCATGGACGATGCCAAG 47953 29 100.0 32 ............................. ACCCGCGCCGGCTTCCACGAGGAGGTCATTGC 48014 29 100.0 32 ............................. CTTGCCGCCGAGTGGTATGGCGGTGTTCGTCC 48075 29 100.0 32 ............................. CGCCGCGCATGAGCTGATTCTGCAGGGCGAGC 48136 29 100.0 32 ............................. GTGTGCTCGCTGGTCCGCGTAGACCGTGGCTT 48197 29 100.0 32 ............................. ATAATTTGTTATCCGATCAGGTAGATGCCATT 48258 29 100.0 32 ............................. CGTCGCCGAGGCTATCGAAGCCGCTGCCGTCC 48319 29 100.0 32 ............................. TCCAGACGCGGATCCAAAACGATCTCCAACGT 48380 29 100.0 32 ............................. TGGGCGTGTGATGGTAAAACTGTTGGTTTATG 48441 29 100.0 32 ............................. TTGCTGGTAGCCGCCGAAATATCGACCCCGCC 48502 29 100.0 32 ............................. CGCCCTCGATGCCACTGAGGTGACCGCATGAA 48563 29 100.0 32 ............................. ATGTCGGTCCTCGAGTTCATAGCGAAGACCGA 48624 29 100.0 32 ............................. ACCATCGGTGACTCGGAGTATGCCGAGCGGAT 48685 29 100.0 32 ............................. CTTCGATGCATCTACTCCAGCCATTTGATACC 48746 29 100.0 32 ............................. ACCGGGTAGGTGATCGCGTTACCGGAGACGCC 48807 29 93.1 32 ............T...............A TGGCGTTGGCTGCGTCGTATGGCATTGAGAAG 48868 29 100.0 32 ............................. GCCGGAATGACAATCGCACTCACAAAAGCCGA 48929 29 100.0 32 ............................. GACAGGTTTTGCTTGCGAGGCTGCGATCTGCT 48990 29 100.0 32 ............................. ACGCAGAACGCGAAGGCTCGTTTGCGGCCGTC 49051 29 96.6 32 .............G............... AATGCCAACTGGGTGGGGTTTGAGTAAAACTG 49112 29 96.6 32 ............T................ AATGCCAACTGGGTGGGGTTTGAGTAAAACTG 49173 29 100.0 32 ............................. ATGCGGGGAGAACTGATTCCCAGAATTGTGTC 49234 29 96.6 32 ............T................ TGCAAGAATTACCATGGCGGCCGTAACCGATC 49295 29 96.6 32 ............................T ATTCGTGTGGGCGATCGTATCCGCGTTGAGTG 49356 29 100.0 32 ............................. TGAGCGGTTTCGGCGAGCTGTACCGGCAACTC 49417 29 100.0 32 ............................. GGCACGGCGTCGGCAACAAGAATCCACGCCTT 49478 29 100.0 32 ............................. TTGGGCTCTGATTCTGTCCCAGTCTTGCGGGA 49539 29 100.0 32 ............................. AATGTCGAGGTTGATGCCGAAACTGGCCTGAC 49600 29 100.0 32 ............................. AAGCGTTTGAGTCAAGATCGTTTTCCTTTCAG 49661 29 100.0 32 ............................. TTCCAACGCTCGCATCGCGGTTCGATGCGATT 49722 29 100.0 32 ............................. CACTCCACACGGTGGTTGGAGTTCGGTGTTAT 49783 29 100.0 32 ............................. CCACAGATCGGTGAGGTCTTGGGTGGTGAAGC 49844 29 100.0 32 ............................. GTGAGCTTCTGCGGAGGCATGCCGTTGTTCAT 49905 29 100.0 32 ............................. ATAAGGCAAAGGAGACCAGCTCCGAAGCCCTA 49966 29 100.0 32 ............................. GAGGCCGGCGAGCTGTCTGAGACCCGCTCCGT 50027 29 96.6 32 ................T............ TCGATAATGCCCAGGTCCTCAAGATCCTCGAG 50088 29 100.0 32 ............................. GTAACACCGCTAACCGAGTGGGAGGCGGCCGT 50149 29 96.6 0 ....................C........ | CT,G [50171,50178] ========== ====== ====== ====== ============================= ================================= ================== 94 29 99.6 32 CCGTTCCCCGCGCACGCGGGGGTATTTCC # Left flank : AGCTCAGGCATGCCTTGCATTCAGAACACATGCTTGAAGGAATGCTCACATCCATGATGGAGATTCTGACGCCACACCTTCCGTCGCGCGATGACGACCGCCTAATCGATGATTCAGACGAGGAAGCCGAGGGTCATACTCAGTATGGCGATTCGGAGGAGTAGGGCAGCTTCATGTTCGTAGTCATGGTTTCATCGCTTGTTCCGGATCATCTTCGTGGATACCTTTCAAGATTCGTCGTCGAAGTCGAGGCGGGAACCTTTGTCGGAAAGGTTTCACCCTCTGTGGCCGACCGCTTGTGGGAGCGGGGCGTGGCGGCTATAGGGTCTGGCCGGCTCACTCAGATTCGTAGTGCACCACAGTGCGAGCAGGGGTTCGAGATACGCACATATGGGCAGGGTGCTCCAACGGTCTACGACTTTGACGGCATACAGTTGATTGCGCGCCGGCAAGCTGCACAGAATGGGGAAGTTCTGTAGAGAAAGGCAAGGTCAGTTGGT # Right flank : CGTTATCGACCCCGGGCTCGGCTCCTACACATGTTTCACGGACACGTAAGGCCATCCATGGTTCATTTTCAAGAGGAGCACGCACGTCGCGCTGCGTTCCTCGCATTCGAGTTCGCCTTCGGCCAGTTACAGATCCACTCTCGACCGAGCAAAGCGGATGATCTTGGTCTGTCTAGGACGGGAGTGGCACTCGATCCTCTGACGGACGATCATGGAACGCCATGGCGATAGGTCTTGTCCCGCAGATCAAAGGATGATTTAGGCCCACGGCTGCTTTGGGCCCAATATGGTCCGGGTCTAGATTGACTCTCATACCTGCTGTGTGATCCCGAGATCTGGCTGCGCGCAGCAGCATGCATTGCCTCAGCCCGGCGGTCCCTGCAGTTCTCCGTAAGCGCTTCACACAATCGTCATTCAAACTGCAGCCGGATGAATGTCCTCTGATCCGACTGAACGGCGCTCAAAGAGTAATGCACCGCAGACGCAGCCTGGAGGCTAGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCGCACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //