Array 1 6200-6361 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQOR01000094.1 Eubacterium ramulus strain MCC545 NODE_100_length_6665_cov_52.525433, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 6200 29 100.0 42 ............................. GTATTCCCTGCATATACATTTAAACCTTTGAAAAAATAAATA 6271 29 100.0 33 ............................. TGACACAATGAAAAATTACTATGAAGAAGCCGC 6333 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================== ================== 3 29 100.0 38 GTGTCAATTCCTCATAGGCAATGTACAAC # Left flank : AATGTCAGAACACCAAACTGCATTTGGCCGTTCTAGATTAAATTGTTCATCAAGGATGTTTTGTAGTTTGCTACTGAAATCGGAGTCTCTTGTGGTGATTGCCCACAGCTTTACCCACTGAGCCTTAATACCCATTTGTTTCATGTACTGCCCAACAGTACGCTCAGAAATAGTTTCTCCTGTTTTGCGCAACACTTTGGAAATACCTGCAGCTCAAAAGAACTCTGTCGATCCTGAGGAACATTAACCTCAAATTCACCATGTTTGCTTCGAACCGTCTTAGGCTTTGTTCCATTGCGATAGTTAGGCTCACCAGATCTTTCATAACGGCCATAACCAAGATGATTATCCATTTCTGTTTCAAGCATATCTTGAATTGTGTCAGACAGAAGATCCTTTAAGGCCTCCTATGATTTTTATATTTTATCATAGAAGACCTTTACATTGTCTAATTTACAGAATTTTTTTCACCTCGAGGAAAAAATAATGTATGTAGAAAA # Right flank : AACAGTATTTATCAACTGTTTTCTTTATCTTACTCCCCATTTTCTTAAAAATCAACCATTTCCTCCCCAAAAAGTACGTCGATCTATTTTATATCAGAGCCGCTACAATCCGCATGTTTACTGGATTTGCAGACATTTTTCTAATTTCTGAAAATCGCTTTCTGAGATCGACGTACTTTTTAAGCCATTTTTGTCTGTTGTTTTTGCTCAATAAACCCCCATTTTTTCTTCCACATGCCTACAGACCTTGATTTTAGCGGGTTAGAGGTCGACGTACTTTTTCATAATCAATTTCAAAACACACAATTTTCTATGCAATAATAAAAAGAGTCAGATGTTTGCAATCAGCAAATCTCTGACTCACACTTTTTGCATTCTAATCAA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCAATTCCTCATAGGCAATGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 33768-34204 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQOR01000012.1 Eubacterium ramulus strain MCC545 NODE_12_length_49883_cov_80.140549, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =========================================== ================== 33768 26 100.0 43 .......................... GCTGTCGTATACCAGTCCTGTGTAGCCGAAGTTTACAGCACCG 33837 26 100.0 43 .......................... GCTGTCATTGTACAGTCCTGTGTAACCAAAGTTAATCTGGCTG 33906 26 96.2 43 .....................T.... ACTGTCATATACCAGTCCTGTGCGTACAAATGTGATGGTGCTG 33975 26 84.6 40 ..T..................T.C.C ATTTGCTGTCAGACCAGTGTATGCAAATGTGATGGTTCCA 34041 26 100.0 43 .......................... CTTGTCATTGTACAGACCTGTGTAACCAAAATTGATATTGCCA 34110 26 96.2 43 .....................T.... GCTGTCATATACCAGACCTGTGTAGCCATAGTCGATGGTTCCG 34179 26 69.2 0 CCAA.C...............T.C.C | ========== ====== ====== ====== ========================== =========================================== ================== 7 26 92.3 43 TTCTCTACATACCACCAGCCACAGTT # Left flank : GTTCTGCCTGATTGGCGGAATCACCTGCATTAATATTTGCATTTCCGATATTCGCCAACTGATCCATGTCCATATCCAGCGTAGAGGAAAGCAGATACATCCGTGATGCATCCGCACGGTTCCTGTCCATGGGATTTTCCGGGGCTGTCTTTCCAAAAGAAATCATCAGCGCCAGAAACAGAGCCACAATTCCGGCTCCCGCCAGTGCTCCTCTTATTTTCTTTTTATTTTTTCTGTTTCTACTTCCCGGTCTGTTCATGAAATTCCCCTGTTTTTTTGACAAAAGCAGGTTTGTTCCGGCTGCAAAGTCCGAAACAAACCTGTTTTTTACTTCCTTGTGTCCATCTAAATGATGTGTATGCAATAATTGTCAGATAATTATTCGCAATCTGCCAACGCTACTTGCTTATTCACGTTAGAATCTGACTGCTCCTCCAACTACATTCCATACACCGTATGCATTTCTTACAGTTCCTGTATACCCAAAGTTGATGGCACCG # Right flank : CACACTCAGCGAGCCCTGTGTAATCAAAATCTACCGCACCGTCTTTGATGTACCACCAGCCGCATACACTGTCATTGTACAGACCTGTGTACTCAGCATCTACTTTGCCGGCTTTGACATAATGCCATCCGTAAACAGCATCGTTGTAAAGTCCGTTGTAAGTAGTATCTACTTCACCGTCTTTTAAGTAATAGAGACCGTCTTCTCTCTCCTGAAGACCTGTAAACTCTCTTGCTTTATCTCTGGTTGTTACATGTGCAGTCAGATCAACCGGAGCTGTGCTCTCATTGCCGTCCGTGAAATACAGACCTTTGATCGCTACTTCTACCGGATCATCTACATATTTTAATACTTTAAATTTTAATGCAAACGTTGCTTCCGAGAAGGTAGTATCTTTTGCAGATGTCAGGTAAGAGAAATTTCCTCCCGCAGTGGATACCATCGCTTTCTCCGGAAGATCTTTTTTCTCAAGTCCCTCAAATTCCAGTACAGTTTCATCG # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCTACATACCACCAGCCACAGTT # Alternate repeat : TTCTCTACATACCACCAGCCATAGTT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //