Array 1 502922-503616 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZPN010000001.1 Streptococcus oralis strain 102 Soralis_102_DanaHsu_Sia_YES_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 502922 36 100.0 29 .................................... TTGTCTTGAATGCCCTTGATATATTCAAG 502987 36 100.0 30 .................................... AGGTAGTCCGGTGAGTGGATAAATTAACCC 503053 36 100.0 30 .................................... TTCTCCTGTCTCTGGGTTTACGTCTTCATA 503119 36 100.0 30 .................................... ATTTGGCTGGGTCTATAAGTATTTTACTGG 503185 36 100.0 30 .................................... CCGCAAGGATTGAACCTTACGAGATTAAGA 503251 36 100.0 30 .................................... GGATTTCCGTGCCAGGCTTTCTCGATTGCA 503317 36 100.0 30 .................................... ACAAGACCTAATCGATTGGGACATGGATCC 503383 36 100.0 30 .................................... ACTATCAAGCTGCCCACCAACTGCGTCACC 503449 36 100.0 30 .................................... ATCAAAAATATTCATTATAACCCTCACATA 503515 36 100.0 30 .................................... AGCTACAAGCGATATGAAGCGCTGTTGCGT 503581 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGACGATTTTCTATCCTATAATGATTTTGTTGAATGTTGTGAGAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTATTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTTATCATTTTTATTCGCTAGAATTTATGTATAATCGCTTTACCAATCAGTATCCAATAAATCAAATACCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCATATTTATTTAGCTCGGACATTCTCCACATGAGTTTATCTGTAGAAGATCAAGTAGCATTAAGAATTTTGAATAATTTGTATCAGTACAAAATGAAAACAAAATTCCGTATTGAATCAGTCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGAGATTTAAGGCTTTATAATGTTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGAG # Right flank : CGGTCTGAATTAGATCTAACTCAGCAATCGGAACGGAAACGCCCTCTTTAGCTTCTTAAGAATAAGCTCACCAGTATGGTATAATGTCATATAGTAGCGATCAGAGAGGAAAGGAGCGGAAACGATGCTAGCTATTGTTATTGATTCTGTAGGTGACAAGTCAGGGACCTATAAGTTGTTAAGAAACCATTCATCCTTGCCTTTTTCTTTAATCCAATCCAGAATCAAAGATCATGACGCGGTGATAGAAGTATACATGTTAGATTTGGATGGATTGAGAAAGGTTCGAGAACTCATCCATGAGTTGAATACCATTGGAACCAAGGTTACGATAAGAGATTCGACTGGTATTATCACCTTAGAAATAGTAAATAATCTTATTTCTACTTTTGAAGAGATTGCGGCAGAGAGAGAAGAACTGGATGCTCTGATGTTTGAAGAGGAAGAGTGAGTGCCACGTTTTTCAGTGGATCACCAAGTTAGTTTTTTAGTAATAGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //