Array 1 3581-123 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJGC01000113.1 Desertifilum sp. IPPAS B-1220 NODE_82_length_14348_cov_31.7184, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 3580 37 100.0 33 ..................................... GCAAAAAAAGGATTGAATGGGAAGAAATTCGCT 3510 37 100.0 44 ..................................... GTGGGACGAACCTATGCCGAACGCAACGCGGGACAGGGATTAGG 3429 37 100.0 34 ..................................... CGACCGATGCGAAGCGTTCCGAGTTCAAGCCAAG 3358 37 100.0 35 ..................................... TGATACCTATCAGTGGCTTTCTAGGGTTGAGAAAA 3286 37 100.0 34 ..................................... TCGGCTAGTTGAACGTAGTGCTGTTTATCGCTGT 3215 37 100.0 37 ..................................... CTCTTCCTTATAATCTGTCCGGCTTCAGCATCTGCCA 3141 37 100.0 43 ..................................... ATTGCCCAAATTTCTTCAATTGCAGAAAGCATCCCACCGGATG 3061 37 100.0 34 ..................................... TTTCGAGATTACTGCGATCTGATGAAAATCGATG 2990 37 100.0 36 ..................................... GCGATCGCTGCTGATGCTCGAAACGGCTGACCTGGG 2917 37 100.0 35 ..................................... TCTGCCTTACACTTACTACCCTGGTGATGAGTATT 2845 37 100.0 35 ..................................... TAGCTTTTCCTTCTCGGCATCCTCGCGTTTTTTGA 2773 37 100.0 37 ..................................... AGGCAACTCCTCTAGGGAGCAGCCCAGCGTTTGGCAA 2699 37 100.0 37 ..................................... AAGAGAATGTTGTACTGCCAAGGATCTTGTCCGGCAG 2625 37 100.0 34 ..................................... CGGTATATTGAGCATTTACAGACCGCGATCGCGC 2554 37 100.0 34 ..................................... GAATGACGGCTCGCATTATTAAGCCTCAGTGCGA 2483 37 100.0 34 ..................................... TGGCCCCTCTCAAGATTCTAAGCTCTGCGCTCAA 2412 37 100.0 33 ..................................... GGGAGTGAATACTAATGGAATTAATCTGGAATC 2342 37 100.0 35 ..................................... TACACAATTAATAATACCGAAACCTATTCTTTTAC 2270 37 100.0 34 ..................................... ATCTTCCTTTTCTATTCCAATTTCAGCCGACCTA 2199 37 100.0 34 ..................................... ACCTACCCTCTATCTAGCTATAGTTTTCTATTCC 2128 37 100.0 35 ..................................... ATTACAGGTTGATTTGGAAGTAGAGAAGGTATATC 2056 37 100.0 34 ..................................... TCAGTAACTTGATTTTACTCACCTCTAACATTCT 1985 37 100.0 35 ..................................... AATACTTGATTGATAAACTATTTGATCTTAAACCA 1913 37 100.0 34 ..................................... ATCAAATCAGAAGAATTAAAATTAGTCGAACCTG 1842 37 100.0 35 ..................................... CGCTGCTCGATCGAATCGAGTGCGATCGCCTAGCC 1770 37 100.0 38 ..................................... ACTACCCTATCCGTGTAACCAGACTTTAACTAAATATT 1695 37 100.0 35 ..................................... GGCTCAACCACAAAGGGAAAATTAACCGATTTAAG 1623 37 100.0 36 ..................................... TTGTCGAGGATGCGGCGCTGCACATCAACAGGTAAT 1550 37 100.0 41 ..................................... AGAAACCGGCGAGACAACCTGAAAAAATCCCAATGGTGGAA 1472 37 100.0 41 ..................................... AATAAACAGAAACAGGCTATCCCCTGGTAGAATCCTTGAGG 1394 37 100.0 34 ..................................... AAAAATGCAGATTCAGGTTGGTTCGATTGTCCGA 1323 37 100.0 39 ..................................... TTAGAAAATAATGTTGACCTTGATATCGAAAATTACCGG 1247 37 100.0 35 ..................................... CCCGCTGATATCAAGCATCAAGCCGATCAATTGAT 1175 37 100.0 34 ..................................... CTATAGTAAATTTTACTCTCCCTTCGTACTTCAT 1104 37 100.0 35 ..................................... TTGACTGGTTAAAGGGACTCCCTCAACGCGATAGA 1032 37 100.0 35 ..................................... ACAATTTACGATATTTTCTACGATGAGATTCATTT 960 37 100.0 35 ..................................... ATGATAAGAAGCCAACTGTAAGTTAGTTGTAATGA 888 37 97.3 37 ............T........................ ATAACTAGAGTTACCACTCCCCAGAAGGATCGGACAA 814 37 100.0 37 ..................................... TCTGGGTGCTGTGTTGTGCTGGTGAATCTGCGGCCGG 740 37 100.0 34 ..................................... CGGAAAACTTGCATCACCAGATTAGTGAACTGTC 669 37 100.0 36 ..................................... TGCTATACTCAAATTTGTAACCAAGGATAAAGAGAC 596 37 100.0 41 ..................................... GTTGACAATTTGACCGATAAACTCGCCGTTCTCATCAACAG 518 37 100.0 37 ..................................... ACGCCGAAAATGTGGATTCGCCTAATCCCGGCCTCAG 444 37 100.0 35 ..................................... CTCGATTTATGCGGCTAACTGGCAACGATTACAGA 372 37 100.0 34 ..................................... AGGAATTGGGGGAGGTGTAGGAGTTCCCCCACCT 301 37 100.0 34 ..................................... TTGAGCATAATTTAAGTTTTCTTCCATGACTAAA 230 37 100.0 35 ..................................... GGTCAGACCACAAAGGGAAAATTAACCGATTTAAG 158 36 94.6 0 ................................-.G.. | ========== ====== ====== ====== ===================================== ============================================ ================== 48 37 99.8 36 GTGGAAATTACTCCTAATCCCTATTAGGGATTGAAAC # Left flank : GCGGGAGTTGGTTGAGGAGATTGGCTACTGTCCGCCTCAGTTAGCTTTGTTTGGTGAATATGCCGATGCGCGGGTGGTGCGCTATGTCTTTCAAGGCGCGTTAGAGGTGGGGTTGGAGGCGCTGGTTTTGGGGGAAGGCTGGGATTTTGCCTTGCTGACGGTTGAAGAGATCCAAAAGGGCGATCGTTTTTCTCCAAAAGCAGGAGTCCGCCCCCTGGGTACGCCTCATCAGCGCATTCTGTTAGATTTTATCGCCCAAAATCGCTCTGAGTTGGCGCGGGGGGGTGGGTGTGGATTTTAAGTGTTTCTCCCAAATCGCCGAAGCCCTCTCTGGGTCTGGCTTGGCGCTGTTTTTATCGGGGTTGAGCCTCGCGCCCCTTACGCCACAAGGTTTTTAGCGTTTTCGACTATCTTTTTATTCCCCAAGATGCTATACTTCTTCTTGTGCCGCGCAAGCGAACCTCGAAAACTAAATATATCAAGCCTTCTGGGTGGCTGCC # Right flank : CCTCCTGCATGAATCATGAGACATGGGTCAGTTCATAGTTGAGCAAACCAGCAATCAAGTTCAAGCGCAAGCCAAATCGCCTTCTACGGTTACGATAACGTCCTGAAAAGATCCGAAAAATTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAAATTACTCCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 71493-68000 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJGC01000042.1 Desertifilum sp. IPPAS B-1220 NODE_20_length_106246_cov_33.0746, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================== ================== 71492 37 100.0 35 ..................................... AGGAACATATGCGACTAAATGAAAAATGGTATAGC 71420 37 100.0 34 ..................................... TATAGAAAATAATGTTCCTTTAGACCTCGGCTCT 71349 37 100.0 39 ..................................... ACCACAACTTCGTAGACGAACACCTGAAGAACCCAAGAA 71273 37 100.0 36 ..................................... CACGCGAGAAATTTCCGAAAGAGATTTTAGATAGTC 71200 37 100.0 36 ..................................... GAGGCTATCAGCCAAGATTTTGACTTTCTCAATACC 71127 37 100.0 38 ..................................... ATCAATGAGAATGGTACATCCATCGCCAACATCATATT 71052 37 100.0 37 ..................................... TGGACGCCCAAGGACGGCTTCACGGACAAGGAAACCG 70978 37 100.0 35 ..................................... TCGCGAGGAATATCGCGCTAACTACGATCGCTCGG 70906 37 100.0 36 ..................................... GCCGCTGACCTCCTTCTGTAGCTCGTTGAGCTTGAA 70833 37 100.0 36 ..................................... CGAGAAATCCCCAAATCGCTTCGCGCCCGGTCTAGC 70760 37 100.0 35 ..................................... CTGGCAAACCTTCAGCTTGCTCGAAAAATCGCCCA 70688 37 100.0 35 ..................................... TTTACAAGCGGGTTTCTCACTTAGAATCAGAGTTT 70616 37 100.0 39 ..................................... AAAAAAGCGGCCATTGACCGCTTCATTTTTTCTAATCTT 70540 37 100.0 35 ..................................... AGACTTTCCGGCTCCGGCTATCCCTCCAAAAAATA 70468 37 100.0 38 ..................................... TTTGCTGCCCTTGAGCGAGTGGCAAGTGGTGAAGAGTC 70393 37 100.0 38 ..................................... TTCGGGGAAGAATATTTAACCCCAGACGATTTCGTGAA 70318 37 100.0 35 ..................................... AGAAGGTTTAACTCGAATAGTTGTCCCTGAGCAGT 70246 37 100.0 34 ..................................... TTTTGGGGCTTATGTAGTCCTGCATTCGCTGATA 70175 37 100.0 36 ..................................... TTTAGGATTTATTATGGCTGCTAAAAAATCTTGCTC 70102 37 100.0 37 ..................................... AGGATGGTATCGAGCATTCTTGGGCGGGTAGTCGGAT 70028 37 100.0 50 ..................................... CTGAATTGAGGTAATGAAGCGATCTTCTCACCTCATAAGAGGTTGGTCGA 69941 37 100.0 35 ..................................... AAGATGGCCGCTTTTTTAACGCCAAACTGACACAC 69869 37 100.0 38 ..................................... GGCGATCGCTTTTTGTTGGGGCATCGTTGGGAGGCGGC 69794 37 100.0 35 ..................................... AAAAAACTGGTTAAGAAATTCCTTGTCCGCATTGT 69722 37 100.0 38 ..................................... GTAGCCCAAAACCGCAACGGTTGCGGTTTTACCGTATT 69647 37 100.0 35 ..................................... GGCGGGCTTCTGTGCAAAGGATACTGCTTGAAGTT 69575 37 100.0 33 ..................................... GGCAGGGTGGGGAAGCGGTGATGACGCTGATTG 69505 37 100.0 35 ..................................... GACGCTTTCATTCCACTCGCTCTCAACATCTGGAA 69433 37 100.0 34 ..................................... GAGAAGGGCTTCAAGTCTTTGGAGTCCGCAATCT 69362 37 100.0 36 ..................................... GTTTTTCTGCAACAACTCCTAATCCAATGATTTGAA 69289 37 100.0 44 ..................................... ACAGCAATCCGAATTAGTGCGCCTCCAAGCAGCAAATCAGGCAG 69208 37 100.0 35 ..................................... AGCATTGCCGAACTTTCAACGTACCCAATTCGTTT 69136 37 100.0 37 ..................................... CAGTCTTTGCCCTGAAAGCTCCGTGCAATGGCACAAA 69062 37 100.0 39 ..................................... AAGTACCATCCCGCCCCAGTAGGAAAACGCTGCCGCCAT 68986 37 100.0 38 ..................................... TGCAACCTGTTAACCAGCAGAAGTAAGCGTACGCCCAA 68911 37 100.0 33 ..................................... GAGCAGATCCGAAAACTTGCTTTCAAGCTCTCG 68841 37 100.0 34 ..................................... ATAACTTGCGCCAGACTGACATATAAAAGGATGG 68770 37 100.0 34 ..................................... CATCAAGCCCAGTAAGATTAAGCTGAAGTATCCA 68699 37 100.0 37 ..................................... AAATAGAAAGCCATGACTACTGAAAACTTTAAGCTTG 68625 37 100.0 35 ..................................... ACAAGCGTTGGTAACTCTGTGGTGGCGTCCGTTGT 68553 37 100.0 44 ..................................... AGCGCTTGGCACCACCTTGGGGAACGTGATCTGCGGTGGAAATT 68472 37 100.0 43 ..................................... AATTGCCGGAACTGTTTGGCGACCTGGTTGTCATGCTGCGCTG 68392 37 100.0 33 ..................................... GGCAGCCGTGCCAGGACTTCCACCTAAGTACAT 68322 37 100.0 37 ..................................... TTAAATCGCGCATGATTCACCTAAAATTTTGCACCGC 68248 37 100.0 33 ..................................... CTGAGCCATTGCCCTATCACCTCCTCTACCCAT 68178 37 100.0 35 ..................................... AGGTTCAGAGAAATGCGAACCCTGCGGATCTTAGA 68106 37 100.0 33 ..................................... TTGCCTGTCGCCTTTGGATAATCTCCAGGCTGA 68036 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================== ================== 48 37 100.0 37 ATTGCAATTTCCTCTAATCCCTTTTAGGGATTGAAAC # Left flank : GTGGTGAACCCTGCGGCGAAGAGTAATAAAAGCAGTCCGATCTACGGAATGCCAATTTTAGAGGTAGACAAGGCAAAACATACGATTGTTGTGAAGCGCAGCATGAGTACCGGGTTTGCTGGGGTTGATAATGACTTGTTCTACAAGGATAAGACGATGATGCTGTTTGGTAATGCCAAGGATGTGATTGCCAAGCTCGTTTCGGAAGTGAAGCAACTCTAAGCCCAGAGTCGTTTGCGGAGGAAGGGAAGAGGGTTATCCCTTCCTCTGTTGGGCGCGAGGGGGTGGGTGTAGATTTCAGCGATTGTGAGGTAGCCGCTAGAAGCCCCCAGGCGCAAGGTTTTGAGTTGACTTGGCTATTCTTGAGCCTCGCGCACCTGATCTCACAAGGGTTTTAGCGATTTGGACTATCTTTTGTCTGGGCAATATGCTACATTAAGTTCAGCCTCGCGCAAATGCACCTGGAAAACTAAATATACCAAGGCTTTCGGGCGTCCGCG # Right flank : AGCAAAGACTTTTAGAAACACGATCGAACAAGCGATCGCCCTCAAGCAACCCCCTATAATCCCTAGAAGAGAGAGAACCCAAGAAGCTCAGAGAACCTCTCAAGCGCGCTGTCGCAAAAGCTGCTGCCATCTAACCTTCAGCGCCACATAGAGAGGAAATTGAAAATGCTCCAAAACCAGCCAACTCACAAAACTCAAATGAGAGAAAAACGTGAGAACCGTCCACACAACAGGGAACCAGTAAGCCGAACAGATCCCGCCACTTTGGAGCAAATCCCAAGGCGAGAGAGTCGTGCAATAGCTGTTTGGCATTGGGGGGAACGTGTGATACGCCAACCCAATTAACGTAGGGGGTAAGAAAACGAGCGCAATACCCACTAGCCAAATTTCCCAGGTTAAATCTAAATCTTCGCGACGATGGGTGGCTTTCCAGGTTTTCCCCGTCCATCGCCAAGAAAGCGGTTGGGAACCATCCACCACCTGAACTCTTTGTTTATCGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCCTCTAATCCCTTTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 119792-128321 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJGC01000032.1 Desertifilum sp. IPPAS B-1220 NODE_14_length_129473_cov_31.6637, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 119792 37 100.0 34 ..................................... AATTCTGATCTGCTTCTGCTTATGTAGTTGGTAG 119863 37 100.0 34 ..................................... GTACCGCCTGCAAAATTGATATCTGCATTGGGTG 119934 37 100.0 35 ..................................... CACACTCCGCCCAACATTTTGAGCAATGCCAATTC 120006 37 100.0 38 ..................................... CCTACTAATGAAGAGCTTATTTATCCTCATCTCCAGGA 120081 37 100.0 36 ..................................... TTACCTTGCTGCTCGGAGTAGGTGCGATCGCACTTA 120154 37 100.0 35 ..................................... GAGCTTGCTCAAGTGGATCGCGGGGGGCGGCTTGT 120226 37 100.0 35 ..................................... CCGCAAGCCTTCAGGGTCTTTCGTATCCTTCTCAA 120298 37 100.0 34 ..................................... CAATTTGCCGATTACCGCTCTGGTGATTGCGATG 120369 37 100.0 34 ..................................... CGGCATCTTGTAGAGCCTACCGCCGCGATGTCGC 120440 37 100.0 34 ..................................... TTGCTGACGTGCCTTTAGGGGAACCAATTCCAGG 120511 37 100.0 36 ..................................... GGTTCCATTGCCGTTGTCTGTGAACAACTCAGCAAC 120584 37 100.0 34 ..................................... CAACGCTTCCCCCCAAATGGCGAAAGCGCTAGCC 120655 37 100.0 35 ..................................... CAGCAGCGTAGCCTTTGCGAACAGCAGACGAAAAC 120727 37 100.0 34 ..................................... GAAGTCCACACCGCAACCGAACGCTACGAACGGT 120798 37 100.0 36 ..................................... TGATGACCGGGGTGGGATCATCTCCCTGGACAACTG 120871 37 100.0 36 ..................................... TTCCTCATTGCTTAAAAAAGCAATGAAATATGTTTG 120944 37 100.0 39 ..................................... GCGCGAGAGGCTTTGATATCTGGGATGAGCCAGCCTGAC 121020 37 100.0 35 ..................................... AAATTCTGCAAGAAAATGGAATCCAATACACAGCT 121092 37 100.0 37 ..................................... AGTTTAACTTGGGAATTCGATAACAAGAAAGAATCGA 121166 37 100.0 35 ..................................... CAATCAACTCCTCTTCAGTGGGTTCCAATTCAAAT 121238 37 100.0 35 ..................................... CAATTCCTAAAGCTTTAAGTCTTCTATTTGCTAAA 121310 37 100.0 34 ..................................... GGCTGATGAAATTCAATTTATTTCCGCAATTCGG 121381 37 100.0 35 ..................................... TTCTGAAGCCTGAGCAACCAAGCTGCTCAGTAGAT 121453 37 100.0 38 ..................................... CTCTTATCCTTAATGCTGGACGCGATCGCACTTTTAAC 121528 37 100.0 31 ..................................... GCCGCAATTCCGTCAATGGTTTCGGGAGACG 121596 37 100.0 36 ..................................... AAGCCCTATACCAATTTCCTGCTTACTCTCCCAGGA 121669 37 100.0 38 ..................................... CGGGAAGCCCGCGCCAATCAAGCAATTGAGGAATTGGA 121744 37 100.0 40 ..................................... GCTTGGTATTGACCCCCTTGAACGAATTCATTATTTTCTG 121821 37 100.0 35 ..................................... AAAAATTACGGCAGCAAGAATACCGCCATTGGGGA 121893 37 100.0 32 ..................................... AAATAGACATAGCGCCCTCAAGACGTGCGGAA 121962 37 100.0 33 ..................................... GATATTCCGGCTGATATCAAGCATCAAGCCGAT 122032 37 100.0 40 ..................................... TTGTATTTGCCACCACTGATTGGATTGGCATCTTTCAGAA 122109 37 100.0 36 ..................................... TACCATCGCTGGAAAGCAGTGCTAAAATTAGATTGG 122182 37 100.0 34 ..................................... TGCTTTACTGCTTGAGTAAAACTTGAAGGTTGTA 122253 37 100.0 41 ..................................... CGGCTGGCGTATTCTATTCCTCTGGCGCGAACGGCTCCGGT 122331 37 100.0 35 ..................................... CCTGACCTTCCCCAAAACTGGAACCCACAAGACTA 122403 37 100.0 35 ..................................... GCCCTCGTATTCCCATCCGCATTGATCGCAGCAGT 122475 37 100.0 39 ..................................... GGCTAAATTTCGATTCTACCGCTCCGAAGGAATCATAGA 122551 37 100.0 32 ..................................... CAGTGAATCACAAATCTGGACTAGGCGATCTC 122620 37 100.0 34 ..................................... CTTATTTTAGAACCAATCTTAAATACCCAAGATT 122691 37 100.0 34 ..................................... TTATAGGTGCCATAAGTAGCGATATATACTCCAG 122762 37 100.0 35 ..................................... TCCGTGAGAGAGATTAAAATTAGCAACCCCTTATC 122834 37 100.0 34 ..................................... CTGGTAAATGTTTGCAATATACTTATTACGTTCT 122905 37 100.0 35 ..................................... TTCTAAATCTTCAAGAGACCAATCTATTAAAGTAA 122977 37 100.0 38 ..................................... GGCTCGACGAACATTAACGGACGCGATCGCAGATTATA 123052 37 100.0 34 ..................................... GCAAAGATAAAAGCTGTTTGCAAGGTAACAAAAG 123123 37 100.0 37 ..................................... CAGATTATGAGCAGCACTAGGAAGTGCGCCGGATAGA 123197 37 100.0 37 ..................................... TACGCTCCCCGCCGTCACCCTCCACCCGTGGTGCGTG 123271 37 100.0 35 ..................................... ACCGCTACCCGGATTTTCCTTTCGGTATCTAGCTA 123343 37 100.0 30 ..................................... AAAGTAGGCGATCGCCCGGTTTATTTGAGA 123410 37 100.0 34 ..................................... CTGGCTCTTTTGCCTTTGAGGTTGCTTCCTTAGC 123481 37 100.0 39 ..................................... CAATTTTACACTACGCCACAAGAACAAGACAGCAATAAT 123557 37 100.0 36 ..................................... CATCGGCTCATAGATTCGGAAACAATCCGCAATACT 123630 37 100.0 37 ..................................... TCGCTTTGCAATTGGGAGACACATGAGATGGAATTGA 123704 37 100.0 38 ..................................... ATCGGCTTTGCAATCAAAATCTTTATGGAGTTATAAAA 123779 37 100.0 34 ..................................... ACCTCCGATAAAGACGGGAATGTTTCCGGTTACT 123850 37 100.0 41 ..................................... TGTATCAAGACTAACCACATTCTCTATTTGTCGTGCAACGT 123928 37 100.0 35 ..................................... TCAAATTCTACGGGGTAAGTTTCCTCAGTTTCATC 124000 37 100.0 37 ..................................... GGCAGCGATAGATAGCGCTACGCTCAACCAGCCGAAA 124074 37 100.0 36 ..................................... CAATCCGCCCCGACGCACCCCAGGGAATAGTTCAGC 124147 37 100.0 37 ..................................... GCCGCTAGTATCGAATGATACTAGCCACCTAAGTACG 124221 37 100.0 34 ..................................... TGGATGTGTCTACTGTCAATCAGATGGGCATTCC 124292 37 100.0 36 ..................................... AATCAGGTGGGGGTTGATGTCGGAGGCGAGGACTTG 124365 37 100.0 34 ..................................... AAATGGGTGTTCTCTTGTCCCTCATTTATCTGGG 124436 37 100.0 32 ..................................... CGAGCCACTGGCAGTACCAGATAGCTTTGCGT 124505 37 100.0 36 ..................................... ACGCCTACTTTTCTTGGTAGCGATCGCCTAACCCAA 124578 37 100.0 33 ..................................... CACCGCATTAAGTGCAACAACAGGAGCGATCGC 124648 37 100.0 36 ..................................... TCTATCTTTGGGGGAGAAGCCATTCCTTTCTTGATT 124721 37 100.0 35 ..................................... GAACAAGGCGAATATAGCGCCGCAGAAATCCAGAT 124793 37 100.0 34 ..................................... GAGACAAACTCACCCCCCGGATATTGCTGACCCC 124864 37 100.0 35 ..................................... TAATTTGACTTTGCGCCTCGGCTCCCACCCTTGCT 124936 37 100.0 35 ..................................... AACATTTCTAAGATCAGGATTTCTCATAGCGACTT 125008 37 100.0 35 ..................................... CTTGTTGGGGCTGTTCGATGGGCTTGACGCGCTTC 125080 37 100.0 35 ..................................... AGCATCTCAGCAGCAATTGATTAGCCAGTTGGTAG 125152 37 100.0 35 ..................................... TGGCGGATAAGATTTTAGGGCGATCGCTCTCACCA 125224 37 100.0 40 ..................................... GTTTGCCAGCTAGAAGAATCGGGTTGGGCAGTCGTCGGCC 125301 37 100.0 41 ..................................... TCTGAATGTTGAACTTCTAGTAAGTATAGAAGTCCTCAAAC 125379 37 100.0 41 ..................................... CTGTCGATAGAGTTGTTACAGGATTCCCGATTCGTTCAATT 125457 37 100.0 36 ..................................... GGGGGATGGTAACGGCGGCGGCGTGCTTTACAATAT 125530 37 100.0 35 ..................................... GAATTTCTCCAGCACGATCTAGAACTGGCACAACT 125602 37 100.0 35 ..................................... ACCTGCCCACAGGAATCAGCCGTTCTGGTAACAGC 125674 37 100.0 38 ..................................... CTCACATACCTAGCTCTAATAGTTTGACCTCCATACTG 125749 37 100.0 43 ..................................... TGAATTGATCGATCACCTAGAAGTCGGCAAGGGAGTCGTCATC 125829 37 100.0 34 ..................................... ACCGCGCTGCCTTGATTCGTTCGGTTTGGCGCTC 125900 37 100.0 33 ..................................... TTATCTTCGTTCTTAATAGGAGAAAAATCGATG 125970 37 100.0 35 ..................................... AAGAGGCAGCAAAAAGCCCCGACCGGAGCCGAGGC 126042 37 100.0 35 ..................................... AACAAAGACCTGAAGAACCCAAGAGCATCGTTTTT 126114 37 100.0 35 ..................................... TTACCGCCGGTTATGTGAGCTTCTGGGAAACTCGA 126186 37 100.0 33 ..................................... TGATATCTCCATCCTCAATGCTGCATTTGAGGA 126256 37 100.0 36 ..................................... AGACTCAACCGACTTGTTATAAAACAACACCTCCTT 126329 37 100.0 36 ..................................... TAACGCCCGAATCAGCTCACAGAGAAAGTAAACAGC 126402 37 100.0 33 ..................................... TGCGGTCTCATCGGCTTTATCAAAATATATAAA 126472 37 100.0 34 ..................................... GTTTGCCTCAACTTTCCGGGGCAATTGTCCAGCG 126543 37 100.0 33 ..................................... GAGAGGGATAAAAGCCGAGAGGCTAAGTTCAAG 126613 37 100.0 32 ..................................... GTTGGGGCGATCGCATTAAATCTCCGCCAACC 126682 37 100.0 35 ..................................... CAGTACAGCCAGCGACCGCGATATCCGCGTTCGCC 126754 37 100.0 43 ..................................... AAATATTAGTGAACCACTACCTTTTAGCTTAATAGCTGCACTT 126834 37 100.0 34 ..................................... TATGCATTCGGATGCTATACTGATGATACTGCTG 126905 37 97.3 41 ...................T................. TTGAAACAAAGTAAATTGCAATCCCAAGTCTCTGCTGAAGC 126983 37 100.0 35 ..................................... TTGAAACCGCAATTGAAGGAATCCAACTCTATGTC 127055 37 100.0 32 ..................................... ATGGGATACCACTGGCTAGGCCACATTATCGA 127124 37 100.0 38 ..................................... GCGGCGCTGGGGGCTGGGGTTCTGGCAGCGGAGGCGGC 127199 37 100.0 39 ..................................... ACAAGAATTTACAACTCTAATAGGAGTCAATGATTTCAA 127275 37 100.0 35 ..................................... CGGACAATCGCTCATACCAAAAAATCGTGCAACGC 127347 37 100.0 34 ..................................... GGCCGGAAGAATGCCTTCGACAACAAGGGCTGTG 127418 37 100.0 33 ..................................... TTCTCCTTTTATCTTCGGCGGGTGCGATCGCAC 127488 37 100.0 34 ..................................... ACGCTTGGGCGATCGCTTTATAAAAACTACCGAA 127559 37 100.0 38 ..................................... GAGGCGATCGCAACCGTTGCCATTGAAGAGGGCGAATT 127634 37 100.0 34 ..................................... ACATCGCCGGGAAATTTAGGTCAGGCAGAGAAAT 127705 37 100.0 35 ..................................... ATTTTGAAGAGTTCGTTCATGTTTATTAAATATTG 127777 37 100.0 33 ..................................... ATGCAGCAGCGAGAACTCAGACAGCTTGACCTC 127847 37 100.0 32 ..................................... CCTAGGATTCCAGCCTGCCACTGGATTTATGA 127916 37 100.0 41 ..................................... TCGCTAGATTCCCTCGCGATTCCAACAACTGACGGGACAGG 127994 37 100.0 37 ..................................... ACTGTGCAATCCCATAAAGGTAAATCCTTTTATGCCG 128068 37 100.0 35 ..................................... GTATTTTGCCGACTACTTTGATGATCTGTTACAGA 128140 37 100.0 36 ..................................... TGGCTTAGATCGCTTGACGGCTTGTTGGATGCTCTG 128213 37 97.3 35 ....................................A GGGGTAGTTCATAGCAGTTTGTTCTGGGAGCTAAT 128285 37 91.9 0 .............T.........A............G | ========== ====== ====== ====== ===================================== =========================================== ================== 118 37 99.9 36 ATTGCAATCAAAACTAATCCCTATTAGGGATTGAAAC # Left flank : ATGTTTGGGCAAGTATGGGCCAGGAGTCGGAAGCTGATAACCGCATTCCCCTATTTCAACCCTATCAACTCAATACGGAGTTATTAGGCCATGCGGACAAAGATGCGATCGTTCTCCATTGTCTCCCAGCCCATCGCGGCGAGGAAATTACCCATGAGGTGATGGAGGGTTCGCACTCGCGCATTTGGGATCAAGCAGAAAACCGGATGCACGCTCAAAAGGCTTTGCTGGCAAGTTTGCTAGGCTGCGACTAGGCGCGTTTCTTCTGGGCGTTGCGCGAGGGGTTGGGTGTGGATTTTCTAAGGTTGCTAAATATCGCTGGAAGGCTGATGGCTGACAGGTTTGGGGGCATTTGCAAATCATGAAGGCTCGCGCACCTTATCTATCAAGCTTTTCAGCGATTTGCTCTTGTGTTCCCTTGGGTTCTATGCTACCTTTAGGTCAGCCTCGCGCAAGCGTACCTGGAAAACTAAATATACCAAGGGTTCTGGTCGCCCGCG # Right flank : GCTGTAATTGAGCGAAAATAGATAAATCGAATTGCCGAGAGAAGAGAACGAGGACAAATCGAAACCATGTACAAATTTTACTTACCAAACCTGGGCGTCACAGTTTCGCTAGAGGTTGAAGACCCCAATGCTAGTGCGGAGATGAAATTTGAGGGAGAGAAACCGCAAGTTCGGCTAACCCGCGCCGAACTACATGGAGCGTATGGAGCCTTTGGTCATACCATTGATACATGGGCAACCCCCATTGACCTTCATTGTGCATTAGTGACCGCAGCCCAGAGCGATCGCAGATTTGAATTTGAGATGACTGAAGGCCAAATTGATAGCTACGATCCGGGCATCCCACCCGATGCAATCACCTAACAGCAATATAGCGTTACCTTCCACCCTCGCCATCCCTAATTTTAGGAATTGGGTTGCAGGCGATCGCACTTCCACTGCCCATACCCCTTGTAATAAAACTGTAAAGATTCCATAAACCAGGCATAAAACTTAATTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATCAAAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 39751-45413 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJGC01000061.1 Desertifilum sp. IPPAS B-1220 NODE_35_length_63014_cov_34.2498, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================== ================== 39751 37 100.0 34 ..................................... TTACTCCGGGCTAATTTAGTCGGGCATTGCTGGC 39822 37 100.0 35 ..................................... TCCGGTAATCTCTTTAATGATGCGGATGTCTACGC 39894 37 100.0 33 ..................................... TCGGAATAGCACAGCGTAAAATGACCTTTGGTG 39964 37 100.0 34 ..................................... TGTATACAAGGGGAGTTTTGCAGCGTTAGCGTGT 40035 37 100.0 34 ..................................... AACTAGCACCCCAACTTCATCGATAAAGTAGAGA 40106 37 100.0 38 ..................................... CCTATTTCAGGAGGGGACAGCCTGCATATACAACGCAG 40181 37 100.0 35 ..................................... TGTAGATGTTGGCGCTCATGCAATCATTAGTTCCG 40253 37 100.0 33 ..................................... TCCTTGAATCGATGCGACTACTCACCCTATGAA 40323 37 100.0 36 ..................................... CGCGGTAGCTGCGCTCCAAGGCGGCAGCTTGTTCGG 40396 37 100.0 35 ..................................... AGGAAGACTTGGAAGTTCTTGGGGAAAAAACTAAA 40468 37 100.0 36 ..................................... ACCGCTCAATTGCCTGAATTGCTTGGCAACCTGATT 40541 37 100.0 35 ..................................... CGCGACTTGGCAGAACAAGAACGAGCGATCGCATC 40613 37 100.0 35 ..................................... CAAAGGGACATAGATCTCGCTAGACCACTCCGAGG 40685 37 100.0 34 ..................................... ATCATATCGGTATTTAAGAAATCAAAATCTTGAT 40756 37 100.0 33 ..................................... TCTCCAACGAGCGATCAGCAACCTTTAGCACTT 40826 37 100.0 35 ..................................... ATCTAGCGCTTCTTTAATTTCGCATTTGCAATTGT 40898 37 100.0 33 ..................................... GCGAGTAACCTGATTGCAAGCAAATTCTAAATC 40968 37 100.0 36 ..................................... ACCGCTCAATTGCCTGAATTGCTTGGCAACCTGATT 41041 37 100.0 35 ..................................... CGCGACTTGGCAGAACAAGAACGAGCGATCGCATC 41113 37 100.0 35 ..................................... CAAAGGGACATAGATCTCGCTAGACCACTCCGAGG 41185 37 100.0 34 ..................................... ATCATATCGGTATTTAAGAAATCAAAATCTTGAT 41256 37 100.0 33 ..................................... TCTCCAACGAGCGATCAGCAACCTTTAGCACTT 41326 37 100.0 35 ..................................... ATCTAGCGCTTCTTTAATTTCGCATTTGCAATTGT 41398 37 100.0 33 ..................................... GCGAGTAACCTGATTGCAAGCAAATTCTAAATC 41468 37 100.0 39 ..................................... TGATGTAGAACTCCCACTTAACCACCTTTGGCTCAACAT 41544 37 100.0 43 ..................................... GCATCTTTTTCCTGGAAAGGCGTTTGACCCGCAATGCCTGCAA 41624 37 100.0 37 ..................................... GGAAAATGTTAGAAATTGGATTTCCGGAATAATAGCT 41698 37 100.0 52 ..................................... GATGTAATGGCACGCCTAAAAGTCAATATGCAGGCGATTGAACGCCTCACCA 41787 37 100.0 35 ..................................... CACTAGGGTGGTTTTTCCGCTCCGAGTTTTGGCAA 41859 37 100.0 35 ..................................... CAGACTTGGGAAACCGAAACCGCCCGCGCATTAAA 41931 37 100.0 39 ..................................... TCGTTCAAAATGGAAGATTTAGTCGATCGCGAGTTGTAT 42007 37 100.0 34 ..................................... GATACCCATTGCTCTTGCTACTGTTGCCGCATCG 42078 37 100.0 38 ..................................... GAATCAGGCTGGCGATATATTTGGCTAGGTTGTCAGGT 42153 37 100.0 41 ..................................... TCAGCGGAACGAGCCAGCAGGCGATCCGCGCAAGCAACTTC 42231 37 100.0 36 ..................................... CCTCTAGGTGGTTTCGAGGGTTAGACATTGCGCTCC 42304 37 100.0 44 ..................................... GTCCGCATTGCAGAGCGCTCCTATGTGGAAGCAGAGATCGGCAA 42385 37 100.0 35 ..................................... GGGAATGCCCTAATTGCAAAACCAAGCACGATAGA 42457 37 100.0 37 ..................................... CATCGCCAACGGCGAAACCTTCATCTTAAAGCTAGAG 42531 37 100.0 34 ..................................... CAGCCCTAAAAATTTAGCAATCACATCGGGACTC 42602 37 100.0 35 ..................................... AAGGCAATATCATCTTCGTTGCGGGTGGGTCGAAG 42674 37 100.0 36 ..................................... TTAGAAAAGGTTGTTTTGCATGTTGCACCAACCTTG 42747 37 100.0 35 ..................................... TTGAAAGCGTTGTCAATTTCGTGGCAAGAGTATAT 42819 37 100.0 41 ..................................... ATGCGATGCTCTGCCTTTGACCCACCGTGCAATATCGGCAG 42897 37 100.0 37 ..................................... GCGACGTGAAACTAGCATTTTCTTCGTACTGCTTGAA 42971 37 100.0 44 ..................................... ATGAAGTTGGCGTAGAGAATCGGTTCAAAGGGAAACGGGATAGC 43052 37 100.0 34 ..................................... AAAATGTCGGCGGGGATGTCGGCATACTTCAAAC 43123 37 100.0 40 ..................................... TGTTTCTGATCGGTGCAGCGATCGTAATTGGCTCATCGCG 43200 37 100.0 38 ..................................... AGGATATCGCTAGGAATTTCCTGGTAACGAAGCGCATT 43275 37 100.0 35 ..................................... GGGATAAAGCTTCTCTTTTATCTTCTAGGTTTCTT 43347 37 100.0 37 ..................................... GCGATCGCCGCGACCTGGTTGAGGATTATTTTTGCGG 43421 37 100.0 45 ..................................... GAGCGCTTGACTGCTGATTCAGCCAATTTTCTACTGCGAACTGGC 43503 37 100.0 35 ..................................... GAGCGCTTGAGGATTGTATCTTGTTTGATTTTGAG 43575 37 100.0 35 ..................................... CATTGATTCCCAAGAGATGAATCTCTCAATACTTT 43647 37 100.0 35 ..................................... CGAGAATAGCGATCGCCGTATCGCCTACGACCTCG 43719 37 100.0 34 ..................................... AGCCATCGCTAGCAGTGTGGAGCGCATATCATCC 43790 37 100.0 34 ..................................... CTGCTGCTTGACGGCATTCCAAGCGGCCAACAAG 43861 37 100.0 35 ..................................... AGAAGGAATCATCACCGTTCCGCTGCTATTGGCGG 43933 37 100.0 33 ..................................... CTGGTAGATCGAATCGTTATGCAACGCGATCAG 44003 37 100.0 34 ..................................... TCCTCGTCAAGGGCGCGATCGCTGCTGAACACCA 44074 37 100.0 34 ..................................... CTATTGATAGCTTTGCTTTAGAGGTTCCCTCTGA 44145 37 100.0 34 ..................................... GCCGAAAACGTAGACAAGAAAACCCTATATTCGG 44216 37 100.0 34 ..................................... ACTAGATTCCAAGGTAGGTGTAGACTCAACTTTT 44287 37 100.0 38 ..................................... TCCTACTGGTGAACTTAGGGCTAACTCACCCAACACCA 44362 37 100.0 36 ..................................... TCATCCGAGATTCTACTTATCTTTATATTGAGCAAG 44435 37 100.0 34 ..................................... GGTGACGGCGCTCATTAAGTTGCCGAGCTTGATT 44506 37 100.0 37 ..................................... TCAAGAATTTCTCATAATATTATTAAGCCCGATATTA 44580 37 100.0 35 ..................................... TCCGCAGTTCGGGCAATTCATAATCTTTCCTCATT 44652 37 100.0 37 ..................................... TAAAATTTGCCGATTTTTTTCACTAGATAGCCAGTTA 44726 37 100.0 35 ..................................... TTTATTTGTGAGTCTATCGTATCACATCGTCAAAC 44798 37 100.0 34 ..................................... GCGATCGCTCTTTTGTTGGCGCTCGACTTTAGCG 44869 37 100.0 34 ..................................... AAGGCTTCAGTGGATTTGCTATACTTCTGCTTTT 44940 37 100.0 37 ..................................... CAGAGCAGAAAAGCGCCAATGAATCCGAGCTTGGTTC 45014 37 100.0 37 ..................................... CCTATCTAATCCGCTTTTGAATCTTAAGAAATTGCAA 45088 37 100.0 37 ..................................... TAATCAGAGATGGGCGAATGGCTCATTTGAGATTTGG 45162 37 100.0 36 ..................................... TTGTTCTACCCCTTTTTTGGAAAGATGAACAATTGC 45235 37 100.0 33 ..................................... AATACTATTATTGATATTATTATCTTATTATTC 45305 37 100.0 35 ..................................... AGCTCGGCGGGTTGATGTTTCCTTCCGATCTATTG 45377 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ==================================================== ================== 78 37 100.0 36 ATTGCAATCAAATCTAATCCCTTTCAGGGATTGAAAC # Left flank : GGCGATCGCACAATTCACCGTTCGCCGCCAAGCGGATGCTGAGGCGCTGTTGGAGTTATCTAATTATGCGTTTCCTCACCAGAAGCGCTTGCTGATTGAGTTTTTTGCGCGACAAGCGATCGCCAAGTGGCTTCACCCATTCTGGGGAGGGGGTTTCCCGCCGCCGATGTTTCAGTTGCTTTCAGATCCGATGACTCCCTATTCTGAGATTCTGGAACGCTATCGGGGTTGGATCGATCGGGTGAAGCGGGTACAGGTTTCTGGGGGATAGGTGGCGCGAGGGGGTGGGTGTGGTTTTGCTGGCAATAGCGCGATCGCTTGTAGCTCTTGCTGGGCTTGGTCGGGAGTGCGATCGCGGCTCTCAGGGGGTCGCGCTCTATACGGGGTAAGGTTTTCAACGATTTTGGCTTTTGATTTCTGGAAAACTATGGTACATTTAGAGCAGCCTCGCGCAAACGCACCTGGAAAACTAAATAACTCAAGGGTTCTAGCCTCCCGCG # Right flank : ACAGTAGGAAAAACGGAGCGAAATCGAACAGAGAACAGACTCAAGAGAGGATCGGAGAAACAACCGTTGGGGAGGGAGGGAGTTTTTTGAGGGCTTGTAGGGCATCCGCCGCCGTTTGAAAGCGATCGCTAAAATGATAGGCTACCATTCGGTCAATCACCTCAGCCAACTCCGGGCCAACCGCAGCCAAATTGCGCCAAACCACGCCCCCCGTCTCTTGATCCTGGCGTAACTGGTGGGGGGCAATACCCGTCAGCGCCTGAATGCCAATCATCCCCAGCGCATAGAGATCGCTACTTAACCGGGGTTGTCCCACCAACTGTTCGGGCGGCGCATATCCCTTGGTCCCAATTGCCACGGTAATATTCTCAGTTTCCGGTTCCCACTGGGGTTGAATTTGCTTAACTGCACCAAAATCAATTAAACACAACCGTTGGTCAGACTCGCGGCGAATAATATTACTGGGCTTAATATCGCGATGAATCACCCGATGTTCGTGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATCAAATCTAATCCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 127032-124024 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJGC01000066.1 Desertifilum sp. IPPAS B-1220 NODE_3_length_228677_cov_34.2432, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 127031 37 97.3 34 ....................................T ATTTTTGCGATGACTGTGGCGCTGAATACGAAGG 126960 37 100.0 45 ..................................... TTGACAGTCACGTCGTCCCGGTGCGGGTCGCCCCAAGGAAAAAAA 126878 37 100.0 38 ..................................... TTGACAGTCACAGTGACTTCAATGAAACGCCTCCTAGT 126803 37 100.0 42 ..................................... TTGCAGATGTCCCGGTAGGTGAGCCGATTCCGGGGCGGACCC 126724 37 100.0 40 ..................................... GCTGCCAGTGGCCCTGGCAAAATTTTTCAACCTATTGGAG 126647 37 100.0 33 ..................................... GCTCCTGAGAAGAAGAATAAAATAGATTGCTAT 126577 37 100.0 36 ..................................... TGAATTAGTGGCCGCCGCCGATTTATTCAACCAATC 126504 37 100.0 35 ..................................... GATGGACCTTTTAGCCTTCCCTACGAGGTTTCTAG 126432 37 100.0 34 ..................................... CTCGTTCTGCTGCGGCGGCCTCAGCCCTCGGCTC 126361 37 100.0 34 ..................................... TGTTGCCAGCATCCCTCCTGTGAGGAATCGGGCT 126290 37 100.0 34 ..................................... CTTTTGTGGAGACCCACTGCGGTTTAGTCATAAT 126219 37 100.0 35 ..................................... TTGTGTTGCATGAATCCAGAATGCCCAGTAAGAGT 126147 37 100.0 33 ..................................... GCGGTATACCTGCCAGGGAGTGCGCCGCCCCTT 126077 37 100.0 34 ..................................... GGAACGCTATCGAAGAGTTCTGTCATATTTGCAA 126006 37 100.0 37 ..................................... ACGAAAAATTCATAGCAAGATTTTAATTAATGGACTT 125932 37 100.0 36 ..................................... TCACAAACTCGCCTCGATGAGCGATCGCGTAAACTG 125859 37 100.0 34 ..................................... AATTGGAAATTTCTGAGGATTCCATTATAGAAAT 125788 37 100.0 37 ..................................... ACAACCGAAAACCACGATTCTCTGAACAGACAATCGG 125714 37 100.0 35 ..................................... TATCCGATCGGATACCCTGAGCAGGTGATAGGCGG 125642 37 100.0 34 ..................................... TGAATTGTCTTCAGAATCCCCTCTGGTAACACTC 125571 37 100.0 32 ..................................... CCAGACGTGCGAGCTAACCAACCACCATCCTG 125502 37 100.0 34 ..................................... GCCGTAAATCCGATGCATATCTGCGCGTCTACGA 125431 37 100.0 39 ..................................... ATCCAAGTTGGCTTCTTCTTTAAGAGTAAAACATTGCAA 125355 37 100.0 37 ..................................... CTTTTTTACCTGCAAGTCTATATTTGTACCATTCACG 125281 37 100.0 34 ..................................... CATATCCATAACGATATGCACCTTAATTTCAGGG 125210 37 100.0 34 ..................................... TGCCAAACTTCATCAAAGGATGCCCGATCATCTC 125139 37 97.3 36 .........................A........... GCAGCGCGATAAGGAGATTCGGAATTTTTCTTATAA 125066 37 100.0 36 ..................................... TCTTACAACTACGCTATCACTGTGAATAAATCACAA 124993 37 100.0 35 ..................................... CCGCCTGGGCGAGGAAGTTAACCTGAAGAAAGGGC 124921 37 100.0 37 ..................................... AAATCCAGAGCTTCAAGCGGTGTCATTCGCACAGAAG 124847 37 100.0 35 ..................................... CGGGTATGCCGCTACCGTCACCAACCGATTGACAT 124775 37 97.3 35 ....................................T GCAACAGCAATCGCCCCTACAGCCAACGTCAACAA 124703 37 97.3 40 ....................................T ACCCAGCAATCCCAAGACAACTGTGGTGTCAGTTAAGGAC 124626 37 97.3 36 ....................................T CTCATAATTCCAGCTTGGATCGCCGGGATACTCCAA 124553 37 100.0 34 ..................................... ATCGAATCAATTCCTAAAAAGAAGGGGGGCTGCT 124482 37 100.0 34 ..................................... AAGTCTCGCAAGAATTCACAGTATCTAATTTACC 124411 37 100.0 34 ..................................... GCAAGAGGATATCGCTCACTCACTGCGCCAAACT 124340 37 97.3 34 ....................................T GAGTTGGGCGGCATAGGGGCGCGGATCGGCTTGA 124269 37 97.3 34 ....................................T TTGGAGTGCATCCGGGCTGCACTTCTGATCGAGC 124198 37 97.3 33 ....................................T TCCTTTTGAAAAAATGGCAGGTGCATCTGCCCC 124128 37 100.0 31 ..................................... GTACTACACTCACAAGGTGTAGCCCATTGAA 124060 37 91.9 0 .CAT................................. | ========== ====== ====== ====== ===================================== ============================================= ================== 42 37 99.3 35 GTTATACTACATCGTTAAGGTGTAGCCCCATTGAAGC # Left flank : GCAGTTGGGTTTTCCCCAAGAGGCGATAGAGAAGGTGGAGGAACTTTCGGACGAACAGGGGCGAAAGTTAAGTCAGTTTGATGCGTTCCAATTTCAACGGCGTCGCACTCAAGGACAAGGTTCTAAAAGTTCGGATCGGGGATACTGGTTTCGGTTAACTTTTAAAGAACCCCAAAAAGGACCGATTGCTTTGGGCTATGCGGCTCATTTTGGTTTAGGGACGTTTATCCCAATCCGATAAATCGCTCTTGCTGCGCGGAGGGGTGGGTGTAGAATGAATGCTGCTCGACAATATGCCCCAAACCCTGGAATAATAAGGCTGTGGGCGATTTTACAGAAATTTTGCCTCGCGCAAATGCCAAAATGCTTATCTGATAAGCGTTTCGTCGTTTCTGTATTTTCTATTTTCGGGCGATTATTTCCCAAAATGGACTTCTCCCCCCCTCGCCGCGCAACCGTACCTGGAAAACTCCATATCATCAGGCTTTCAGGTTGCCGCA # Right flank : AAGCAAGCAAGGAAGCCAGGAGCGAACCCCCTAGATAGAGATATCCTAAAAAAGGCAGAGGTCAAACTTTGCCTTTTTCCGTTTGGGGATAGACTTGTGCAACCCGTAGACTTTACCACCCTCACCGCCGTTTACACAGACTTGCAGGCGAACTGGCTGCCCGCCCGTCTCGAACAAGTTTATCAGCGCGATCGCCATACCATCTGCCTTGCCCTGCGAACCTTTAAACAGCGCGGCTGGCTGACCATTTCGCGCCATCCCCAAGCCGCCCATCTGTGCATCGGCGATCCGCCCCCCAAAGCGCCCGACACCTTCACCTTTAGCGATCAACTGCGCCACCAACTCAACGGGTTAGCCCTGGTTGCCATTACCCCCGTTGCTCCGTGGGAACGCGCCCTAGACCTGCAATTTGCCAAACGCCCCGGAGACGCCATCCTCTGGCATTTGTACGTTGAAATTATGGGCAAATATAGTAATATCATCTTGGCAAATGCCGATAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATACTACATCGTTAAGGTGTAGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 107919-110376 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJGC01000077.1 Desertifilum sp. IPPAS B-1220 NODE_4_length_194086_cov_34.7704, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 107919 37 100.0 39 ..................................... ACCTTGCTGATTTAGAAGTAGAGCAAGGCAAATCCGCTA 107995 37 100.0 36 ..................................... TATAGCGGCAGATGCTGAAGCCGGACAGATTATAAG 108068 37 100.0 35 ..................................... CATTGCTCAGTACGATACCCAATGCCATCCTTACT 108140 37 100.0 36 ..................................... GCATCAATGGCTGCTGAAGGAAGCCTTGGGTATAAC 108213 37 100.0 38 ..................................... GTTGCTAGGGATTCAGTGGACCGCTTGTCCAACCACTC 108288 37 100.0 33 ..................................... AAAAGTGATGTGCCAATCTCAAGCAACATTAGC 108358 37 100.0 35 ..................................... AGGCAACTGCTATGGCAACACGCAGCACCAACAAT 108430 37 100.0 38 ..................................... GCTAGAGCCTCTAAGCAGCTCAGCCGTAGAAGAATTTT 108505 37 100.0 35 ..................................... GGAATAGATCCGATCGCGCTTCCTATTTTGGTGAA 108577 37 100.0 39 ..................................... TATCAATATCATCAACAAAGCCAAACTCAAGCTTGGAAG 108653 37 100.0 36 ..................................... CGCCAAGTGCGATCGCTCCGTCATTAACATCCTCAA 108726 37 100.0 35 ..................................... GCTGCACAATCTGATGGCGTAGAGGCAGTATTGAG 108798 37 100.0 33 ..................................... AATTTCAAACAATTGGGAGTTAGACGTTGGTGT 108868 37 100.0 35 ..................................... GAAAAAAAATAGCCTCCATGAGATTTCAGGAAAGC 108940 37 100.0 35 ..................................... CCGGGCTTCAAAATGATATCTTCCACTCCATTGCA 109012 37 100.0 42 ..................................... AGGAGGAATTTATCGATAAAAATAATCCTTCGGCTGAGAAAA 109091 37 100.0 36 ..................................... ACAACACTGTGATGAAGATAAAGCTTTTGCTTAGAG 109164 37 100.0 47 ..................................... ATGAGTGCAGCCGACTTTTCCGTCCCGGAGATTGAGCGGAACCGGGC 109248 37 100.0 39 ..................................... AATACTATCTTGCAGAAGGTCGTCCAGTCCCTCCACAAT 109324 37 100.0 36 ..................................... TCAAGACTCCAAGAATTAATTTATAGAAGATTAGCA 109397 37 100.0 42 ..................................... TATGTGATGCCCGACCGGGGGAGGGTTAAAGATGCTCCTGTT 109476 37 100.0 34 ..................................... CTGATGGGAAAGATACCCCTATACATCCGATCGC 109547 37 100.0 34 ..................................... AACCCCAGGGATAGTTATCCCTATGCTATTTAGT 109618 37 100.0 33 ..................................... CGTGGATTTGGAATTTAATCTCAATAACAAAAT 109688 37 100.0 35 ..................................... CCTGAATTACAAGAACTCACTGGTGTTCGGAAAGG 109760 37 100.0 39 ..................................... TGAGTCACCCCCCGACGCGCCCCCGATGCCCAACGTTGG 109836 37 100.0 34 ..................................... ATAGATTGCCGTTGTCCCTCTGGACTGCCCAGAT 109907 37 100.0 35 ..................................... GGATTAACACCAACAACAGCACTTGCAGACATTAA 109979 37 100.0 35 ..................................... GACCCCAACGGAACCACAACGGCAGCAACACAATT 110051 37 100.0 35 ..................................... AGATGCTTCTTGAGATTCAAAGATTTGCTCAGGAA 110123 37 97.3 35 ....................T................ GCGTTGCTTTCCCGATATTTGCTTACAGCTTGGTT 110195 37 100.0 36 ..................................... AGCCATTACAGTGGGCCAGATAAAGCCCATCACATT 110268 37 100.0 35 ..................................... GCCGAAACTGAACTAATCCAGCGCGAGAAGTTTGA 110340 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== =============================================== ================== 34 37 99.8 36 ATTGCAATTTCATCTAATCCCTAATAGGGATTGAAAC # Left flank : TGTTTGTTGTGGTGTCCTACGATATCTCTGAGGATAAGCGCCGAACCAAGATTCACAAGATTCTCAAGTCTTATGGACAATGGGTGCAATATAGTATCTTTGAGTGTTCGCTGGAGCCGACGGACTATGCTAGATTGCGATCGCGCCTACAAAAACTGATCCAAGCCGACACCGATAGCATCCGTTTCTATTTCCTCTGTGGCTGCTGTCAGGGAAAGGTGGAACGTATCGGCGGCGAAATGCCTCGCGATGAGGTGGCTTTCTTCGCCTAAGTGCGCGAGGGGGAGGGTGTAGATTTTGCGGTTATCCCCAAGTTCTTCTATACCCTCTCTGGCTAAGGTTTTCAGCGTTTGTTCTCTCAAAGATGCCCGCGCCCTTTACAGGGTAAGGCTTTCAGGCTCTGAGGCTTGTCTGTTCCCCCAGGGTATGCTATCTTTGACTCATCGCTCGCGCATCGGTACCTGGAAAACTAAATACACCAAGGCTTCTGGGTTGCCGCT # Right flank : AAGAGAAAAGCATTAATCAGGGAGAAAGAAAACCTTCTCAAAACTTCCGGAGGCTGGGGCTTGACAGTGAAACAGGGAGCATGAACAATAAAATAGCTGGATTCTCTCCCTACACACCCAAGCCCGAACCTTGTTGATTGGTTTACATGAAAACTGAAGAAATCGAGATTCCCCATTCTCTGATCGTGGGATGCTGGCAACTGGACGATCGCAGTTGGACAAGCATCAGCGAACCCGAAATTGAACGCGCAATTGATACCTACTTAGCATTAGGGTTGCGCTGCTTTGATACCGCCGATATTTATGGACGTAGTGAAAGCTTAATTGGGCGGTTATTGAAAGGGCGAGACTGCACGATTTTTACCAAAGCCGTCTTTTTTGGAGAAGTCCCCACCCCTAGCCAAGTCCGTAACAAAATTGAAACCTCTTTACGCTATCTCAAGCAGAGTAGCCTAGATTGCGTGCAGGTTCACTGGCATAATCCCCAACTCGATTTTAGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCATCTAATCCCTAATAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 135976-140116 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJGC01000088.1 Desertifilum sp. IPPAS B-1220 NODE_5_length_178902_cov_33.8927, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================== ================== 135976 37 100.0 35 ..................................... ACTGTTGGCTCAGGCGGAAAACGAAGATGAAGTGA 136048 37 100.0 34 ..................................... AAACGATCGCCTCAAGCGAGAGTTGCAGGCTTAC 136119 37 100.0 36 ..................................... CTTCTCCGGACTGGTAGCCACCAACCAAAGCAATGA 136192 37 100.0 36 ..................................... TGAACGTCGGTTTTACCTTGCTGCTCGGAGTAGGTG 136265 37 100.0 35 ..................................... TGGAGAAAACTTCAGACCTTAAATCATACCTGGGG 136337 37 100.0 37 ..................................... TCTTCATCGTTCCAAAGCGTAATTCTAGAACCCCATC 136411 37 86.5 34 .GG.G.T..T........................... TCTTCATCGTTTCACGCAAAACGGCCCCGCTTTG 136482 37 100.0 41 ..................................... CAGGGAGAAGAGGCTACCCCAGACATCAGGGTACAACTGTG 136560 37 100.0 35 ..................................... TTCCCCACTTTTGCTTGTATATTTTTAATCAGCGC 136632 37 100.0 35 ..................................... CCTTGTCGCTGGCAGGATACCCCTAGAGGGCATAC 136704 37 100.0 50 ..................................... CTGGAGTGTATTCGATTTTTGAAAGAGACGAGCAAGTTGTAGCATTGCAA 136791 37 100.0 34 ..................................... AAAGCCGCCGGGGGGGGAGATCCGGAGATGAAAA 136862 37 100.0 35 ..................................... CGATCTATCTTGATGGCTTCTAGTTGATTTTTAAG 136934 37 100.0 34 ..................................... TTTTAGCCTGATTGCGGCTTGGGCCTCTTTCAAC 137005 37 100.0 35 ..................................... GGCTTGCTTAAATATCCGATTGTCCTTAGCTTTGT 137077 37 100.0 38 ..................................... TTCGATTTAAGCTGCGGTTAAAAGCTCCCATTCATCGG 137152 37 100.0 36 ..................................... TTGCCGCTAAGAGCTTGCCATGCAGTGGTAGCCTTC 137225 37 100.0 34 ..................................... CCGACATAGCGCATGGATTCGCCCAAGCTGCCGA 137296 37 100.0 35 ..................................... GCCGCCGCGACTGTGGTATTGCCTTGCTTCATCCG 137368 37 100.0 35 ..................................... CGGAAACTCTGAGAACCTGAATCCCGGAATCTTAG 137440 37 100.0 41 ..................................... GAATCCCCTAGCACACCCGCTACAGCTAGCGGCAGACCGTT 137518 37 100.0 36 ..................................... CACTTCTGGCTCTGGCTCAGATTTCTTCCGGGGCAT 137591 37 100.0 33 ..................................... TCATTCCACCACTGCCAACATCACCTGGTAAGG 137661 37 100.0 35 ..................................... TTAACCACTTATTCATAAACTCACCACCTAAAAAG 137733 37 100.0 33 ..................................... TTTAACCCCGGCCGCAATCGCGAGACGTTAAGC 137803 37 100.0 38 ..................................... CTTAAGCTGGATATTTTTAAGCGGATACGCAACTGGGA 137878 37 100.0 40 ..................................... TTTACAACGCCCTGTAAGCTGGCTTTAACCTGATCTGAGG 137955 37 100.0 34 ..................................... AGAAATTCCGAGGGAGGCATTAAAGATAATGCCC 138026 37 100.0 37 ..................................... AATGCCTAGCGCCTCCGAAAAGAAAGCGTCAACAAGT 138100 37 100.0 37 ..................................... GAAATCTCGATCAAGGCGACAGATACCAAGGCAAGTG 138174 37 100.0 34 ..................................... TCCTGCTTATGTCTGTATCCGTTATCTAGAGCGC 138245 37 100.0 36 ..................................... ACGATTTGCCTTTATTTCTGGCTTCAATATCTAGAG 138318 37 100.0 44 ..................................... TTGACGCATGGGACTAAAAGCTAGCCAACAATTCCCCTCAAAAG 138399 37 100.0 35 ..................................... GAGAAACGGGCGCGAACTTTCGCTAATTTGATAAA 138471 37 100.0 33 ..................................... GTTGTAAGTCGCCACGCCAAGGACGCGCCTCAA 138541 37 100.0 34 ..................................... GCGGTTTTGGGCTACAACGGTATTTAAAATAAAA 138612 37 100.0 34 ..................................... GATTGGTTACAGGGGACTTTTCCCAACCAAAATA 138683 37 100.0 35 ..................................... TTAGATTAAGTGAAGCTGGAGGGGAAATATTTTTA 138755 37 100.0 43 ..................................... AAAAACTGAGAGGGAGGCATCAAAGATAATGCCCCCGTGTCAG 138835 37 100.0 36 ..................................... CGCTTCAATCCGCGTGCCATCATCCATATTAAGGAG 138908 37 100.0 36 ..................................... AGCGATAATCCGGGCATGATTTCTAGAAATGCGATT 138981 37 100.0 36 ..................................... TCCATGTCAAAGCTTCGATCGCGCTGTCGCTGGGTT 139054 37 100.0 38 ..................................... CTTCTGTAGAATCGTTTTGCGCTATTGGCAACTCTATC 139129 37 100.0 34 ..................................... ACTCTAATTGCTTAAAAGCCTACTAGGAATCTAA 139200 37 100.0 39 ..................................... AAATTAAACGAAGGCAGCGATCCAAGCAATCCTAGGGTT 139276 37 100.0 34 ..................................... TACAGCAGTGCTTACCTTTCAAGAATTGCTGCTG 139347 37 100.0 35 ..................................... CCGTCACTCCATTCAAACCGAGCGGCGTACGCCAC 139419 37 100.0 33 ..................................... TAAAGCCTTTGATCGTACAGAAGCAGTGGCAGA 139489 37 100.0 34 ..................................... TGGGATGACAAGCTTTGGAACAAGAAAAAAGAAG 139560 37 100.0 39 ..................................... GGTTTCGCTGAGGGCTTCAGCTTCGACAAATTCGCAAGG 139636 37 100.0 42 ..................................... GAGGCGCTCCGAAATTTCATCCACCTCGAAGCCGGTGCCAGA 139715 37 100.0 34 ..................................... AACTGTTTGTAAACTTCAGCAGCATTGTCCTCTT 139786 37 100.0 37 ..................................... AGGATGATTGAGGTTGTTACGAAGGTGGGTAGCTAAT 139860 37 100.0 37 ..................................... TCGCAAACTCACCCAAAAAACGTTAAGGTGAATCCCC 139934 37 100.0 36 ..................................... AAGCGCGGTAATGCTGACGGTTGTACAGCCACTGCG 140007 37 100.0 36 ..................................... TAAACCTTTTTACTGGTAATCCCTACGGCTATCCAT 140080 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================== ================== 57 37 99.8 36 ATTGCAATTACTCCTAATCCCTATTAGGGATTGAAAC # Left flank : CGTCAAAAATCCGCTTGTGGATACCCCCCGGTTCTAACCCCGCGACTTGGGTTGCACCCACATCAAAGGTAAAGCCTTTGCGCTTGAAGGTGGAAGCGCACCCACCGGGGACAATTGCTAAATCGAACGCGGTGACGGGATAATTTTGATGGGCTAAAAGGGCGGCGGCGGTTAGGCCTCCAATACCAGCACCAATGACGACGACTCGCGGTTTAGTCGAACTCATGCGTTAATAATTTACAATTCTTAATAACTTTATTCTAGCGGTACGCTCTGCGCGAGGGGGTGGGTGTGGATTTTTCCCTCTCTAAGAAAATCGCTAGAACTCTTGTCTAGTCTAAGTTACAAGAAACACCCTCTCAAAACACGTCGCGCACCTTGCCCAGTAAGGTTTCTGGCGTTTCTGTCTATCTTTTTGCAGTCCCCTATGGTACATTGGAGTCAGTCTCGCGCAAGCGTACCTCGAAAACTACATAAGTCAAGGGTTCCAGAAGACCGCG # Right flank : CGAGATAGGGCGATCGCGCTCTCTAAATTAAACTGAGATCCTCCCGAATAAACTCCAAGTGTGATGGTTTTATATGTGGCTGTGTTTCTCCTGAAAAGCAGCAGTGGTGAAAAATACTGAAAAGTAACAATACCTGTTGTGCCATTGGGAGCCATTGAAAATGCAGAAACCCGAACCATCTACCAACTTGCACTACCTCATCCCCTTGAGCCTTGGTTTACTCCTGCTCGTCGGTTGCAGTAGCGCCCAAACCGCAGTCAGCCCCAACCCTGAACCCTCCGTTGCACCTAGCCCAGAACAACCCGCCACCCCGCCAAGTTCAAACGAAACCAGCCAACCCCCAGGTGTTGCTCAAAATCGCCCCACCTTTCAAGCCGATAGCGACAACCCCAACTACCTGCGCGACTACGAACCCACCGAACCCCTCCCCGCCACAGGTAGAGTCACCATACGCGGCGATGCGCGACCTTTAGACCCTTCTAACTTATTTACTACCTGTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACTCCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA //