Array 1 2460557-2456085 **** Predicted by CRISPRDetect 2.4 *** >NC_015673.1 Corynebacterium resistens DSM 45100, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2460556 29 100.0 32 ............................. AGGTGCGCATGGTCATATTCCAGCCACGACTC 2460495 29 96.6 32 ............................A TCACTACTCGCTGGTTTCCAATGACCTAGCTA 2460434 29 100.0 32 ............................. TGAGCACAGACTAACCAGACTAGACAGACCAG 2460373 29 100.0 32 ............................. TGGCAGCCGTATCCAGTGAGTGAGCGAGCGAA 2460312 29 100.0 32 ............................. GCCCGCAATTGTCGAGACATGCCCGAACGCGA 2460251 29 100.0 32 ............................. CGGTGCTGGCTAGACAATTCCATAGATAGCCT 2460190 29 100.0 32 ............................. CCCGGAGTCGATGAAGTTCGCCTCATTCCACA 2460129 29 96.6 32 ............................G CTAAATCAAAATCACGATCCGCAGCGAGGAAA 2460068 29 96.6 33 ............................G CCCTGGTGATTTGCGCTTGCGGTCGGCTGGGTA 2460006 29 96.6 32 ............................A AGCTCGGTAAGGCCCACGGCGCCCTCAATGAA 2459945 29 100.0 33 ............................. TGCCGGGCGTACCGTGGCGAGCGAATAGCCTTA 2459883 29 100.0 32 ............................. CAGAACCAGAATCGAACGTCCACCCCTTCCCC 2459822 29 100.0 31 ............................. GGTGCGTCCCTCAATCCGTAGGGTCGGGGTC 2459762 27 93.1 28 ........-...........-........ TCGCAGACGACGAGGGAGGGCGTTATGA C [2459741] 2459706 29 100.0 33 ............................. CTCTCCCCGTTGTGGCTAACACCCCTGTGTGGA 2459644 29 100.0 32 ............................. CTACGCGTCGCAACCAACAAACGCCGCAAAAA 2459583 29 100.0 32 ............................. GGCACCGTAGTAGCCGACCCTGAACTGAAGTA 2459522 29 100.0 32 ............................. CGCTGTGTCCATATTGCACCACTCCGATGCCA 2459461 29 96.6 32 ............................G CTGTCGCAGGATCAGCATGGATCGCCGTATGG 2459400 29 96.6 32 ............................T TAATGAAACGTCTGATCTTGAATCCTTGCGGG 2459339 29 96.6 32 ............................G CGGGGAAACAGAATCTTCAGATCGGTCAGTAG 2459278 29 96.6 32 ............................T TTCAATGTTGGCGTTTGGCATCGGAGTGGTGC 2459217 29 96.6 32 ............................G ACATGAGCGAGCAACACAGAGCATGGATAGGC 2459156 29 100.0 32 ............................. ATCACGCAAAGATTCAAATACTTGAGGAGATT 2459095 29 100.0 32 ............................. CATGGCGATATTGACATCGTTGAAATCGACGG 2459034 29 100.0 32 ............................. ACGGTATTGCTCACGCAATGATGCGCCGATTG 2458973 29 96.6 32 ............................G ACCCCACCGGCGAATCAGCAGTGAGAAACATC 2458912 29 100.0 32 ............................. AGCCTGCGATAGAACTGTTGAAACATGCTTCA 2458851 29 96.6 32 ............................G ATGGCAGAGTGCATGAGCAGCGTCTTCGAAAT 2458790 29 100.0 32 ............................. TACCCCCACAATCGCACCGCAGGTGCCCGATT 2458729 29 100.0 32 ............................. AGGCGAATCCCCCGGCCACCAAATCCTTGCCC CGAGT,C [2458712,2458724] 2458662 29 100.0 21 ............................. GATAGAGTTAAGCCGGCGCTA Deletion [2458613] 2458612 29 96.6 32 ............................T GAAAGCGAAAGGCCGTCCACCGGGATGGAGCT 2458551 29 100.0 32 ............................. GCCTGCCTACATTGGCTCCAATCGCAGCCACA 2458490 29 96.6 32 ............................G CCTGCTGCGCCGACGACACATAACCATCAACC 2458429 29 96.6 32 ............................G TTCCCTAGTGTCGGGATTTACACGAATGAGTC 2458368 29 100.0 32 ............................. ACCACAGCCGAAAATGTGGTCAGAACAGCGTC 2458307 29 100.0 32 ............................. ATCAGGGCTAGCAGCACCGGGCAGAATCTCGC 2458246 29 100.0 32 ............................. GTGGAACCGCCGTAGCCGACTTCTGGCATGAG 2458185 29 96.6 32 ............................G ACTGTGGACATTAGCGGAGCGGACACGAGCGA 2458124 29 100.0 32 ............................. AACCCAAGCGTTAGCGAGCTGGACCATTGCAA 2458063 29 96.6 32 ............................G GGCCCGGCGCATCCTTGTCTTCCAGACGTTTC 2458002 29 100.0 32 ............................. TGCAGGGCGACGACATGCTGCAGCTCATGTCG 2457941 29 100.0 32 ............................. ATAACCGTTCACCGTATCCCGAATAGCGCCAG 2457880 29 100.0 32 ............................. GTTAAGGGCTATCAGGCGGTCGTCGTCGTGCC 2457819 29 100.0 32 ............................. ATGAAAATCCTGCATAGGCACCCACGTGCCTA 2457758 29 100.0 32 ............................. GCGGTCTGCGCTTTAACGAGGGCGGGGACATT 2457697 29 100.0 32 ............................. CAGGTCGCCCACCTGGAAATCCTGAAGCGGAA 2457636 29 100.0 32 ............................. ACCGGGACCTTTGAAGGCAAGGAACTCTATTT 2457575 29 96.6 32 ............................G AAAGACGTCGAAGGCTTTGTAGCTCAGCTGCT 2457514 29 100.0 32 ............................. GGCGACCCAAGCCTGAAGCTCGCGGTGAATAA 2457453 29 100.0 32 ............................. TCGAAGCGAAGAATAAGGAACTGGAGCCGAAA 2457392 29 96.6 32 ............................G GTGCAGTTGCAGGTGTGGGTGGCTGACCCTCG 2457331 29 96.6 32 .......T..................... CATATGCTCCTGTCGCTCCGTCCAGTTTTCCC 2457270 29 96.6 32 ............................G GCAAACCCCACGAGGATGAGCATGAGAGCTGG 2457209 29 100.0 32 ............................. AACCCCAACCGGGCGCTGGAAACTCGACATAA 2457148 29 96.6 32 ............................G CACCCTCAGGCCTATTCGGATGTTTGCGAAAG 2457087 29 100.0 33 ............................. GGGTTGATCGTCTACGACGGCGGCCTCCACGCC 2457025 29 96.6 32 ............................G GCAAACCCCAGCCCAAACACATCCTCAACGAA 2456964 29 96.6 32 ............................G TGCGCCGAAGGTCATGAGCATGAACCACAGCA 2456903 29 100.0 32 ............................. GAAGACGAGCTCAAGCACCTCGCACCATGGCA 2456842 29 96.6 32 ............................T GCGTCCAACCTGCGCATGTTCTCATCACTCGT 2456781 29 100.0 32 ............................. CAGTCGGTGAACCCGCGCCCAGCGAGTGGGCC 2456720 29 100.0 27 ............................. GGTTTAAGACGAAAAGGAACGCCGAAA 2456664 29 100.0 32 ............................. CATCACTAGAGAAGGTCGAAACTGGTTAGCAA 2456603 29 100.0 32 ............................. ACACCCATGGCATGGAACAACGGCCAAAGCCG 2456542 29 100.0 32 ............................. GACACCATCGCAGCCACACGCCACTAGTACGC 2456481 29 96.6 32 ............................G GAGGGCGGATGTGTCAAACGTGAACGCGCCAG 2456420 29 96.6 32 ............................T GCCACCGGAAGCATAACCCCCAGCCTTGTTAT 2456359 29 100.0 32 ............................. CTGCCGAAAGCCCCAGACCAAGACAAGTTGTC 2456298 29 100.0 32 ............................. TCGTAGGGGTGTTCACGCGTGCCGTCTGGGGT 2456237 29 100.0 32 ............................. TGGCACTCACCATGCGTGCGGTAGATGATGAT 2456176 29 96.6 33 ............................A GTTTGAGGTTGAGCTTCCTGATGGGGTTGATGT 2456114 29 93.1 0 ..................A.........A | T [2456088] ========== ====== ====== ====== ============================= ================================= ================== 74 29 98.6 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GGCAGAGGAGGGAACGTCTCAGTGATGGTCCTCATTGTCACAGCTTGCCCAGCTGGGTTGCGTGGGGATCTTTGCAAGTGGCTGACTGAATTGACCCCGGGAGTATTCGCGGGACGGCCATCGGCTCGTGTTAGAGAGTTGATATGGGAGCGGACGGTCAGTTTGTGTAAGGACGGGCGCGCGTTGTTGGTGTATTCGGCTGCGAATGAGCAAGGAATGGAGTTTCGCACACACCGTCACCAGTGGGAGCCTACGGACTTTGAAGGCGTCACGCTGATGTTGCGACCGTCTAAGGAAGGTTCTAAGGGCGGAAATACCCGTAGCACGGGGTGGTCGAATGCCCGTCGCTCTCGGCGTCAGTACCGCAAACGAACCTCTTGACTGAAATTGGTAAAGATAAGAGATCAACTTCAGGTCGATTAACCCTGCCAATGTAGTGGGGCTGTGGAAGCTGTAGCTACAATGTCCAGAGGGCTCGCATTTGTACTGTTCAGCAAGGG # Right flank : TGGACGCGCCAATCGACACCGCACCGAAAGCACAGGTGTGGAGAACCGGAGAGCCTAATGAAACCTAAAGAATTCCGCATCCTGCGCACAGCTCTTGGCTTGACCCAGAGTGAGATCGCCGATGCCCTAGATGTGCAGCCACGCAGCGTGCGTCGGTGGGAACAACCTACAGATGAACACCCTATCCCCCTTGCCGTCGCCGACTGGATCACCGACAAATGGAACCTGTATGCCGACCGGGTAGCTGATGCGCTTGATCTTGCCGGCGAACTCACCAACGCTGGAGAGGCCGTCACGCTCATCGCGTACACCGATGAAGCGGAGTGCATGATTAGCACCGGCCTGTCGTTAGCTGAACACGATGCCTTACTTGGGCACATCATCATGGCTATGAACTGCTCAGATATTGATTACAGCGTCATTCAAAGGTGACTGCATTACCGCAGTCAGTATTACCGCCAGCGGTAATATTGTTGACGGTAATACCACGCGTGGTGTTG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.97, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //