Array 1 109164-107281 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB904558.1 Streptococcus merionis DSM 19192 A3I5DRAFT_scaffold_6.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 109163 32 100.0 33 ................................ GATTTTATAAGTTCAATTAACCCAGCTTATCAA 109098 32 100.0 33 ................................ TCGGTGTCATAAACTACCTCCGCAACTCATTTT 109033 32 100.0 33 ................................ TCGGTGTCATAAACTACCTCCGAAACTCATTTT 108968 32 100.0 36 ................................ TGCGGTGGCTAGTACAGCATTGACCGCGTATCTAAA 108900 32 100.0 37 ................................ ATCTGGTTGATGTATGGCCGCAGAAAGTCCGGGAAAC 108831 32 100.0 33 ................................ CAATTCAAGAGACGCTATTTTGAAACATGTTGA 108766 32 100.0 34 ................................ AAGAGTGATTTCCATTTGTCCATGAAAAACTTCG 108700 32 100.0 35 ................................ AGGCCAAGTATATGCTCTCAGGTATCGCTCAATGC 108633 32 100.0 35 ................................ CCAATGCTGACGTGACGATAATTTCTGTGATTTGA 108566 32 100.0 34 ................................ AAAGTAATCGTTACGAGACTAAGACTATTACCTT 108500 32 100.0 33 ................................ AAGTACATATCTTGATGATACATTAGGATTTGT 108435 32 100.0 37 ................................ TCGTTCTAGCTGTGCAAACACTGACAGGACTCCGACC 108366 32 100.0 35 ................................ CCTGATACAGCTATCATGAGTAAAGACTATCAACA 108299 32 100.0 35 ................................ TGCTGGCGGATAATCTATAAAGATGTCCTCGTACT 108232 32 100.0 34 ................................ GGAACCAACATTAAAGCCTAAATCGACATAGACA 108166 32 100.0 36 ................................ CCGTAATGATAGCTTCATTATAGCACAGGAGGCTAC 108098 32 100.0 33 ................................ ACTATTCGAACTAGGTTAAAAACAGACTAAACC 108033 32 96.9 33 T............................... AAGGGGCTTTTGATGATGAACCACCTAGACCAT 107968 32 100.0 33 ................................ GGGTCTTACGATATTTTTTATTTGATAAGTCAT 107903 32 100.0 34 ................................ GGAACAAGTCGTTGATGTAGCTGATGCGAATTGG 107837 32 100.0 34 ................................ TCAATGAGCTATACATTGAAGCACTTGGTGGCAA 107771 32 100.0 33 ................................ TTGCCAGCGTCTAGCAAAGTCGTCCATAGGCCC 107706 32 100.0 33 ................................ TCTCCTTTATGGTATAATAGACACAGGGTATTT 107641 32 100.0 33 ................................ GTCTGCAAAGTTCCAGCACTTGTCGCTCCGAGG 107576 32 100.0 33 ................................ AGTACCAACTGGATCTCGAAATGGTGGCGCTAG 107511 32 100.0 33 ................................ ATTTTGGCCAGATTGTCCATTGCCTGCAACTTA 107446 32 100.0 34 ................................ TAGGTTGCTTTTTGCGAGGTTCCCAGCTCGTTTT 107380 32 100.0 35 ................................ GGCTTGTAAACTTGTGCTAACTCGTACATAGATAG 107313 32 78.1 0 ...........T.........C.....TCGCC | T [107285] ========== ====== ====== ====== ================================ ===================================== ================== 29 32 99.1 34 GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Left flank : TAAAGCTATTCGAGGAGACTTGGACGCTTATCCGCCGTTTTTAATTTAGGAGATTTACGATGATGGTCTTGGTTGCTTATGATGTAAACACAGAGTCGGCAGCAGGTCGAAAGCGTCTGCGCCATGTTGCGAAACTATGTGTTGATTATGGTCAGCGCGTGCAAAATTCTGTTTTTGAATGTTCAGTGACACCAGCTGAATTTGTCGAAATTAAAGATCGTCTGTCCAAAATAATCGATATGGAATCAGACAGCATCCGCTTTTACCTGTTAGGCAAAAATTGGCAAAATCGTGTTGAAACGATGGGACGCGATGACAGTTACGATCCTGATATAGGGGTTTTGCTCCTTTGAAAAATACTTTGCGAACCCTTGTTACTCATAAAAGTACGGGAGGTTCGCGCAAAAAAATAGGAAAAATGGGTCATTTTTGCAGTTTTAGAAGCTAAAAAGTGCTTTCTAGATCGCCAATGTGGCCCACAAACGGTGTCTCTACGCGCC # Right flank : TAGTAAATTATGCTGTAAAGTTAAAAGATGATACGTTGTTTTTTAGAATTTGGCGCTTATAGTCGTTAAAGTCAATATATTGAATTTATCATCTAAAGTGTAAGTCTCTCGCTTTCAAATCGTTTCCATTTTTGGTATAATGTAAGGGATTAAAACTTAGGAGTTGTGTAACATGAATATTGGATTAGCGATTTTATTGATTGTCCTTGCCTTGGCTGGGGGAACATTCTTGGGCGCTTTCTTAGTGCGCAAGCAGATTGAAAAAGACTTTGCAGAAAATCCCCGTTTGAATGTAGATGCGGTGCGTGCTATGATGTCTTCTATGGGCCAAAAACCTAGTGAAGCCAAGGTTCAGCAAGTTTACCGTCAAATTAAAGCCTCTCAAAAAGAAGCGACTAAGAAGAAATAAGGATAGTGAAAGGGACTGGGATTTTGCCCAGTCTCTTTTGGAGATAAAGCATGGACAATAGACCCATCGGATTTTTAGATTCAGGCGTGGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //