Array 1 90642-90896 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKJI03000018.1 Streptomyces sp. F-1 isolate Streptomyces sp. F1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 90642 37 100.0 34 ..................................... GCCTCCCCCGCCCCACCTCCACCGAGGAGGCCCG 90713 37 100.0 36 ..................................... CTGACGTCCATCCCCGGGCCTCCCCGGCATCCGCAC 90786 37 100.0 37 ..................................... GACGGTGCCACCGGGTTCCTGGGCGAGGGCGGCGGCC 90860 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 4 37 100.0 36 CTGGCGGTCGCCCTTCGGGGCGGCCGAGGATCGCAAC # Left flank : AGGGTCTGGCACACTGCCGTCGGCAGCAGCACACCTACCGCGCCCTCGTGCGAAGCACCGAACTCCTCCGTCGTCCACGACTCCCGCTCGCCCACATCCCATGCCGAACCCGCCTGGGCGCACCCAGGGCAGGGTGTCGGCACCGACACTGCCGCAGATGCGGCCGCCTTCACCACCGAATCCACCGAAGAGGTGAGGCGCTGCAGCGGCACGTCCATCTCAACGACAGGCGGCTGTACCGTGTCCCGTCCTGTGCTGGTGGCAGTACGCCGCCGACGCCAGCAACGCCACCGCCGCCTGCCTGCTGTTTGGACCTGGAGACAGACCCTCGACATCGGACAAGACCAGCCTCCCTACGGGGATCGTGGCGCTTCGGAACCGGAAGCACACACGCGACACGCAAATCACACCTAAGCCGTATGTCCGTATTCAGTAGCTCTGTTACTCGATGCTCACCCGCAGAGGAGCGAGCGGTAGGCTGTTTCCACTGTTCAAGCAGG # Right flank : CTTTGAGTGGTAGCGCCAGTACGCCGCCTGGTGTTCAGCGGGTGCTGATTCGGGTCTGTGGCCAGCCGATGTCCGAGGGGGCAGATACGGTCTTGGTCTCGGCGCGGAGGGCGGCTGTGCGCATGGTGGGGGAGGAGAGGGTGCTATGGCGGGTGTGTTGTATGCGCACAGCCTGAGTGGTGTCTCGGGGGTGCGGCACACGTTGGAGGACCACTTGCGTGGCTCGGCTGCGTTGGCGCGGCGTTTCGCGGAGGTGTTCGGGGCCGGGGAGTTGGCGGAGTATCTGGCCTTGGTGCATGACGTGGGCAAGGGGGCGTGTGCGTGGCAGGACGGGCTCAGGGCCGTTGAGGCGCGCGGAGGCCGGGGGAGGGTGGGGGTTCGGCACAAGCATGCCGGCACGGTGCTGGCGGAGCGGTATACGCAGTTGGCTTGTGCGGCGGTGGTGTTCGGGCATCACGGCGGCCTTCCGGATCTTGAGCGGCTGCGGGACGAGTTGCACA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGCGGTCGCCCTTCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGGCGGTCGCCCTTCGGGGCGGCCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-17.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 99712-101140 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKJI03000018.1 Streptomyces sp. F-1 isolate Streptomyces sp. F1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 99712 37 100.0 37 ..................................... CACGTGCTCCTGGTGCGTCCCATCTCCGCCGCCTCAG 99786 37 100.0 35 ..................................... GCCGCGGCCGGGATGACTCCTGCGGGCCTCGGACT 99858 37 100.0 37 ..................................... GACGCGGGCAGGGACGCATTCGCCCGCGTCTCCCTGT 99932 37 100.0 37 ..................................... TCGACCTGTTCTGCTGCTCCGGGGGCGCCGGTATGGG 100006 37 100.0 38 ..................................... CCCTACTCCGACAAGGTCACCGTCGCCACGCTGACCGA 100081 37 100.0 37 ..................................... CTCGTACGACAGGCCGGTAAAGTCCAGCGGCTCGGGC 100155 37 100.0 36 ..................................... CTCAACACCGGCAGCGTGACGAAGGACGACACCCCG 100228 37 100.0 36 ..................................... TGTGCTGCGCGCCGCCCTGGCCGAGCGCGGCGTCAT 100301 37 100.0 35 ..................................... ACCGACACCCTCGCCGCGTTCAAGGCCATGGTGAA 100373 37 100.0 36 ..................................... GTGAAGACCAGCGCCGCCGCCCACACCCGCGCCCTG 100446 37 100.0 37 ..................................... CTCGGCATCGTGGCCAGTGAGTACGACATGCGCGACG 100520 37 100.0 36 ..................................... GAAGTCAGCGCCGTACTGAACGCGTCGAAGAACCTC 100593 37 100.0 37 ..................................... CCCTCGCGGTCGGTCGGCCGGACGCGATCTCGCAGGG 100667 37 97.3 37 ...G................................. CTTGGTGTGGCGGACCATCACCGCGAGGGACTCCCCG 100741 34 89.2 36 ...G.................---............. TTCCTCGCTCGCGGGGTGCCAGGTCCAGCGCTCCGG 100811 37 91.9 38 ...G..A.....G........................ TTGACTGCTTCGGTGCCGAATCCGGCGCGGATCAGGAC 100886 37 94.6 38 ...G................T................ GTCGGCTACGAGCACACCCGCAACGGCGTCGCGCCCGC 100961 37 89.2 37 ...G....T...G.......................A TCCGGGCCCGCAGCGGCTTCCTCGCGCCGGCCCGCAG 101035 36 89.2 33 ...G....T....-.........T............. ATCAACTCGGCTCAGCCGGGCGGCATCATCGAA 101104 37 78.4 0 C.CG.....A....T....A...T...A......... | ========== ====== ====== ====== ===================================== ====================================== ================== 20 37 96.5 37 GTGACGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : ACCTTCCTTGGACGGTCTCCTGATGGACCTGCTGCTCACCTACGACGTTGACACCACCAGCCCAGCCGGCCAACGCCGCCTTCGCCGCGTCGCGAAACTCTGTGAAGGCCACGGCCTACGGGTCCAGAAATCCGTCTTCGAGGTCGTCGCCGACGAGAAGACACTCCTCAAACTCCTCCATGACCTCGACCAGATCGTCGACTCCGACACCGACAGCATCCGGCTCTACCGGCTGCCTGCCGACGGCTTCAATCACGTCCAGACCCTCGGCATCGCACAGATCCAGCCTCACCGTGAAGACCTCGTACTCTGACGAAGCAAGACGTCCGCAGCACGGCCGACGGGCGAATGCGAGTTCCTCATGCACGCCTCTTCGGAACCGGAAGCACACACACGACACGCGGATCGCACCGAAGCCGAATGTCCGTATTCAGTAGCTCTGTCACCCGCTGCCCGCCGCTCCGCAGTGAGCGATACGCTGTTTCCGCTGTTCAGACGGC # Right flank : CATCGACAAGGACAACTTGCGCGCGCCGGTGCGTGTAATTGGGACAGAACGGGCGCTTAGAGGTAGTGATTTCTGGATCGCTGGGTTGTGGTGCTCGTGCTGCTGCAGATGCGGGTTGGTTCTTGCTGTTCAGATGGGGTGGCAGGTGAGGCGGGAAGCGACGTGTGTCTGTCTCATCCTAGGACGCCCGGTCTTCGCGGACGCGTGCTTCCGTTGGTGTCGTTGTGCGCCTGGGCGCACTCGGTCCACGGCGGTACGCCGGGAGCATGCCGACGCGACGCCCGTATCCGAGTGATCTGACCGATGCCCGCTGGGAGTTGATCGAGCCGGTGCTCTCTGCCTGGCGCTTCGAGCGTCGCGGCAGGGCCCTGGACTTCGGCCGGCCGCCGGAACATGACCTGCGCGACATCATGGACGCGATCTTGTACGTGGACCGCACCGGGGTCCAGTGGCGCTACCTGCCTCACGACTTCCCGCACTGGAACACGGTCTACGGCTAC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGACGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-18.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-42] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 10832-10557 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKJI03000023.1 Streptomyces sp. F-1 isolate Streptomyces sp. F1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 10831 29 93.1 36 ...C.........C............... CAGGACCCGCCGGGCTGGCAGGGAAGGACCCTTCTG 10766 29 100.0 32 ............................. AAGTTCGGCGACGCCTGGGCGGGCACGCAGAA 10705 29 93.1 31 .......T.................C... GCGCGCACCGCCTCTGCCCTCTTGGGGGCGG 10645 28 82.8 32 ...C.T....T.G.......-........ TCGTCGGCATCCGGGTCGCAGCCGAGCACGAC 10585 29 89.7 0 ...C.TA...................... | ========== ====== ====== ====== ============================= ==================================== ================== 5 29 91.7 33 CTGTTCCCCGCGCTCGCGGGGATGGTCCC # Left flank : GCCGCCTGCCGTAGAGGTGACACGCGCTGCCGAAAGGGGCATCCCGCCACCGCGGGACCGCCAGTCCACCGTGGTGTGCCTCGCCGGGTCCGAGGACGGTGCGGGGCTGGCACGCCTGGTCGCAGGGCGACCCGCAGCCGTCCGAAGGTGCGCTCGTCTCCCGGGACCTGCTGCGCTCCATCCGCGACGGCATCACTGTGGTCGAGCCGCAGAAGAGCGCCGTGTCGATCGACCCCAGTCGTCGCGGCCGGGACACCGCGGACGTCATCGGCGGCTTCCTCGGCGCTGACGACCGGGTGTGGATCACCCACGAGAAGACGAAGGCCATGTCGTCGGCCCGAGTGGTCCCGCACCGCGTGCCTGCTGGCGTACAAGACGAACGCCGGCGTGATCTACGTCGAGTGGAACTACGGCCGCGACCTGTGCACCCTCGCGATCGGCACCGCCTGGCAGGCACTCCAGGACGAGGGCCGTATCCCCAAGAGCAAGCTGATGCCCGT # Right flank : GTGCCCGAGTGGCCGCCCCCTGCCACCCGGTACAGCACCCGGACGGCACGTCACATCACAACAGGCCAAACGTTCGCTGTTACAACACGCGGCCGCTCTGTCGGAACCGTGCACCACGCCGCCGCGTCTATCACAGGCATGGCTGAGAGAACCGCGGAACGGGCCACGGGGATGAACCCGAAGACTGAGGGCGGCGCCGGATGCCTACTCGCCGGCCTCGGTGCGACAGCCGCGCCGCTTGTCTGGGCACCGCGCGCCGCGGTCAATATCGACGGAGGATTCGAGGGCCATGCCCGCGATCTGAGCGTACTCTTCATCGATCTGCCGCTCATCGTGCTCGGTGGCGCACTGGTTCCGCTCTTCGCCTGGGCGTTGGCCGCCAGATGGGTGCACCGCCCCTGGGCCGCGGCACTCGTAGCCCTGGCCACGCTCGCGCTCGCGGTGTGGGGGCTCATCGAGTGGTGGACCCCCCGCCGGCAGCCAGATCCCGGTTACGGACC # Questionable array : NO Score: 3.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCTCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //